RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 ATAD5Q96QE3 1844 aa10.78□□□□□ -0.68
PRKCH-203ENST00000552875 PDS5AQ29RF7 1337 aaKnown RBP10.78□□□□□ -0.68
PRKCH-203ENST00000552875 GBF1Q92538 1859 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 A0A1B0GUL7 405 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 MED19A0JLT2 244 aaPredicted RBP10.77□□□□□ -0.69
PRKCH-203ENST00000552875 F6X3S4 739 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 H0Y858 1186 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 KDM4AO75164 1064 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 BAG3O95817 575 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 SUPT20HL2P0C7V6 817 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 PLCG2P16885 1265 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 JAG1P78504 1218 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 RABL6Q3YEC7 729 aaPredicted RBP10.77□□□□□ -0.69
PRKCH-203ENST00000552875 DEFB128Q7Z7B8 93 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 METTL16Q86W50 562 aaKnown RBP10.77□□□□□ -0.69
PRKCH-203ENST00000552875 NKD2Q969F2 451 aaPredicted RBP10.77□□□□□ -0.69
PRKCH-203ENST00000552875 PABPC5Q96DU9 382 aaKnown RBP10.77□□□□□ -0.69
PRKCH-203ENST00000552875 SCLYQ96I15 445 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 TGS1Q96RS0 853 aaKnown RBP10.77□□□□□ -0.69
PRKCH-203ENST00000552875 SRCIN1Q9C0H9 1055 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 TLR9Q9NR96 1032 aa10.77□□□□□ -0.69
PRKCH-203ENST00000552875 MYADML2A6NDP7 307 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 EYA2O00167 538 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 NCK2O43639 380 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 ZEB2O60315 1214 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 BAIAP3O94812 1187 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 NBL1P41271 181 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 GJA9P57773 515 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 ITGA7Q13683 1181 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 TIGD5Q53EQ6 642 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 ADSSL1Q8N142 457 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 SLC43A3Q8NBI5 491 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 CRBNQ96SW2 442 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 SUGCTQ9HAC7 445 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 CABP5Q9NP86 173 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 MTUS1Q9ULD2 1270 aa10.76□□□□□ -0.69
PRKCH-203ENST00000552875 PGK2P07205 417 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 AVPR2P30518 371 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 COPB2P35606 906 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 PHKA1P46020 1223 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 ZNF792Q3KQV3 632 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 SLC4A10Q6U841 1118 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 KLHDC4Q8TBB5 520 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 KAZALD1Q96I82 304 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 AGBL1Q96MI9 1066 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 FTOQ9C0B1 505 aaKnown RBP eCLIP10.75□□□□□ -0.69
PRKCH-203ENST00000552875 UPF3AQ9H1J1 476 aaKnown RBP10.75□□□□□ -0.69
PRKCH-203ENST00000552875 DNAJC18Q9H819 358 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 CEP126Q9P2H0 1117 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 DCHS1Q96JQ0 3298 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 TNKSO95271 1327 aa10.75□□□□□ -0.69
PRKCH-203ENST00000552875 PKD1L2Q7Z442 2459 aa10.74□□□□□ -0.69
PRKCH-203ENST00000552875 B4GALT4O60513 344 aa10.74□□□□□ -0.69
PRKCH-203ENST00000552875 ARHGEF15O94989 841 aa10.74□□□□□ -0.69
PRKCH-203ENST00000552875 ERVK-21P61565 698 aa10.74□□□□□ -0.69
PRKCH-203ENST00000552875 SMAD2Q15796 467 aaKnown RBP10.74□□□□□ -0.69
PRKCH-203ENST00000552875 SHROOM1Q2M3G4 852 aaPredicted RBP10.74□□□□□ -0.69
PRKCH-203ENST00000552875 CCDC102BQ68D86 513 aa10.74□□□□□ -0.69
PRKCH-203ENST00000552875 TSR2Q969E8 191 aaKnown RBP10.74□□□□□ -0.69
PRKCH-203ENST00000552875 MRPL38Q96DV4 380 aaKnown RBP10.74□□□□□ -0.69
PRKCH-203ENST00000552875 TRPV6Q9H1D0 765 aa10.74□□□□□ -0.69
PRKCH-203ENST00000552875 MYH2Q9UKX2 1941 aa10.74□□□□□ -0.69
PRKCH-203ENST00000552875 MYH13Q9UKX3 1938 aa10.74□□□□□ -0.69
PRKCH-203ENST00000552875 ZFHX4Q86UP3 3567 aa10.74□□□□□ -0.69
PRKCH-203ENST00000552875 EPG5Q9HCE0 2579 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 FLOT1O75955 427 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 NBPF7P0C2Y1 421 aaPredicted RBP10.73□□□□□ -0.69
PRKCH-203ENST00000552875 ZXDAP98168 799 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 SIGLEC14Q08ET2 396 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 ACVR2BQ13705 512 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 RASGRF1Q13972 1273 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 PUM1Q14671 1186 aaKnown RBP eCLIP10.73□□□□□ -0.69
PRKCH-203ENST00000552875 RALBP1Q15311 655 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 ABCB5Q2M3G0 1257 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 CXCL17Q6UXB2 119 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 RETREG2Q8NC44 543 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 BANK1Q8NDB2 785 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 SH3RF3Q8TEJ3 882 aaPredicted RBP10.73□□□□□ -0.69
PRKCH-203ENST00000552875 NSUN4Q96CB9 384 aaKnown RBP10.73□□□□□ -0.69
PRKCH-203ENST00000552875 ABHD16BQ9H3Z7 469 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 RAI14Q9P0K7 980 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 FBXO3Q9UK99 471 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 PALD1Q9ULE6 856 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 ADAMTS8Q9UP79 889 aa10.73□□□□□ -0.69
PRKCH-203ENST00000552875 STXBP3O00186 592 aa10.72□□□□□ -0.69
PRKCH-203ENST00000552875 GALR2O43603 387 aaPredicted RBP10.72□□□□□ -0.69
PRKCH-203ENST00000552875 DSG3P32926 999 aa10.72□□□□□ -0.69
PRKCH-203ENST00000552875 COL9A2Q14055 689 aaPredicted RBP10.72□□□□□ -0.69
PRKCH-203ENST00000552875 ST3GAL2Q16842 350 aa10.72□□□□□ -0.69
PRKCH-203ENST00000552875 CCDC144BQ3MJ40 725 aa10.72□□□□□ -0.69
PRKCH-203ENST00000552875 CERKLQ49MI3 558 aaPredicted RBP10.72□□□□□ -0.69
PRKCH-203ENST00000552875 MAMDC4Q6UXC1 1216 aa10.72□□□□□ -0.69
PRKCH-203ENST00000552875 NOL8Q76FK4 1167 aaKnown RBP10.72□□□□□ -0.69
PRKCH-203ENST00000552875 MAPKAPK5Q8IW41 473 aa10.72□□□□□ -0.69
PRKCH-203ENST00000552875 FBXO22Q8NEZ5 403 aa10.72□□□□□ -0.69
PRKCH-203ENST00000552875 TGFBRAP1Q8WUH2 860 aa10.72□□□□□ -0.69
PRKCH-203ENST00000552875 DDX11Q96FC9 970 aa10.72□□□□□ -0.69
PRKCH-203ENST00000552875 RAD9AQ99638 391 aa10.72□□□□□ -0.69
PRKCH-203ENST00000552875 CLDND1Q9NY35 253 aa10.72□□□□□ -0.69
PRKCH-203ENST00000552875 FLT1P17948 1338 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms