RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 EVX2Q03828 476 aa13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 AAK1Q2M2I8 961 aa13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 FAM126BQ8IXS8 530 aa13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 MSL3Q8N5Y2 521 aaKnown RBP13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 CDCA7LQ96GN5 454 aa13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 SLC28A3Q9HAS3 691 aa13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 C11orf16Q9NQ32 467 aa13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 NAV1Q8NEY1 1877 aa13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 MYH8P13535 1937 aa13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 ARVCFO00192 962 aa13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 TLL1O43897 1013 aa13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 GPR37L1O60883 481 aa13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 DUSP11O75319 330 aaKnown RBP13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 PRKCSHP14314 528 aaPredicted RBP13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 CYP2C18P33260 490 aa13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 TMED8Q6PL24 325 aaPredicted RBP13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 MAMDC4Q6UXC1 1216 aa13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 REPS2Q8NFH8 660 aa13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 GLT1D1Q96MS3 346 aa13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 UPF3AQ9H1J1 476 aaKnown RBP13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 FAM184BQ9ULE4 1060 aa13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 CNPY2Q9Y2B0 182 aa13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 TMX2Q9Y320 296 aa13.83□□□□□ -0.2
SUPT16H-202ENST00000552829 FGBP02675 491 aa13.82□□□□□ -0.2
SUPT16H-202ENST00000552829 NKX3-2P78367 333 aa13.82□□□□□ -0.2
SUPT16H-202ENST00000552829 TMEM31Q5JXX7 168 aa13.82□□□□□ -0.2
SUPT16H-202ENST00000552829 TMEM179Q6ZVK1 233 aa13.82□□□□□ -0.2
SUPT16H-202ENST00000552829 MAGEB6Q8N7X4 407 aa13.82□□□□□ -0.2
SUPT16H-202ENST00000552829 SLC43A3Q8NBI5 491 aa13.82□□□□□ -0.2
SUPT16H-202ENST00000552829 VWCEQ96DN2 955 aa13.82□□□□□ -0.2
SUPT16H-202ENST00000552829 PPP1R12CQ9BZL4 782 aa13.82□□□□□ -0.2
SUPT16H-202ENST00000552829 VCPKMTQ9H867 229 aa13.82□□□□□ -0.2
SUPT16H-202ENST00000552829 ZNF214Q9UL59 606 aaPredicted RBP13.82□□□□□ -0.2
SUPT16H-202ENST00000552829 LRRC37A2A6NM11 1700 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 DNAJC25-GNG10A0A024R161 153 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 A0A0U1RQG5 324 aaPredicted RBP13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 WDR46O15213 610 aaKnown RBP13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 CTAGE5O15320 804 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 ADCY6O43306 1168 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 IDH1O75874 414 aaKnown RBP13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 ASGR1P07306 291 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 CT47B1P0C2W7 299 aaPredicted RBP13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 STAT3P40763 770 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 GJA9P57773 515 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 KCTD2Q14681 263 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 SPICE1Q8N0Z3 855 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 PCSK9Q8NBP7 692 aaKnown RBP13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 ARHGAP45Q92619 1136 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 KHSRPQ92945 711 aaKnown RBP eCLIP13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 FBXO28Q9NVF7 368 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 DBNLQ9UJU6 430 aaKnown RBP13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 PCDHA11Q9Y5I1 949 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 MTCH2Q9Y6C9 303 aa13.81□□□□□ -0.2
SUPT16H-202ENST00000552829 VWA5AO00534 786 aa13.8□□□□□ -0.2
SUPT16H-202ENST00000552829 MPHOSPH10O00566 681 aaKnown RBP13.8□□□□□ -0.2
SUPT16H-202ENST00000552829 GNAI2P04899 355 aa13.8□□□□□ -0.2
SUPT16H-202ENST00000552829 POLR3DP05423 398 aaPredicted RBP13.8□□□□□ -0.2
SUPT16H-202ENST00000552829 COPB2P35606 906 aa13.8□□□□□ -0.2
SUPT16H-202ENST00000552829 RABGGTBP53611 331 aa13.8□□□□□ -0.2
SUPT16H-202ENST00000552829 CLEC10AQ8IUN9 316 aa13.8□□□□□ -0.2
SUPT16H-202ENST00000552829 MTIF3Q9H2K0 278 aaKnown RBP13.8□□□□□ -0.2
SUPT16H-202ENST00000552829 TLR3O15455 904 aaKnown RBP13.79□□□□□ -0.2
SUPT16H-202ENST00000552829 MYOGP15173 224 aa13.79□□□□□ -0.2
SUPT16H-202ENST00000552829 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
SUPT16H-202ENST00000552829 ZNF467Q7Z7K2 595 aaPredicted RBP13.79□□□□□ -0.2
SUPT16H-202ENST00000552829 ANTXR1Q9H6X2 564 aa13.79□□□□□ -0.2
SUPT16H-202ENST00000552829 PPP1R9AQ9ULJ8 1098 aa13.79□□□□□ -0.2
SUPT16H-202ENST00000552829 COG5Q9UP83 839 aa13.79□□□□□ -0.2
SUPT16H-202ENST00000552829 UMODL1Q5DID0 1318 aa13.79□□□□□ -0.2
SUPT16H-202ENST00000552829 C6orf222P0C671 652 aaPredicted RBP13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 AKR1B1P15121 316 aa13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 ACVR2BQ13705 512 aa13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 PPP2R2DQ66LE6 453 aa13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 OTOP2Q7RTS6 562 aa13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 ALYREFQ86V81 257 aaKnown RBP13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 MICALL1Q8N3F8 863 aa13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 SSH3Q8TE77 659 aa13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 FGD4Q96M96 766 aa13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 ARHGEF10LQ9HCE6 1279 aa13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 MCM9Q9NXL9 1143 aa13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 TLR7Q9NYK1 1049 aaKnown RBP13.78□□□□□ -0.2
SUPT16H-202ENST00000552829 PI4K2BG5E9Z4 385 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 RFXAPO00287 272 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 GRIN2DO15399 1336 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 CYP2D6P10635 497 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 ICA1Q05084 483 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 CCDC144BQ3MJ40 725 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 GNASQ5JWF2 1037 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 VTI1AQ96AJ9 217 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 EAF2Q96CJ1 260 aaPredicted RBP13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 NOC4LQ9BVI4 516 aaKnown RBP13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 KATNBL1Q9H079 304 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 HIPK3Q9H422 1215 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 SH2D4AQ9H788 454 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 SWAP70Q9UH65 585 aa13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 BAZ2AQ9UIF9 1905 aaKnown RBP13.77□□□□□ -0.21
SUPT16H-202ENST00000552829 ZHX1Q9UKY1 873 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms