RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 CUL4BQ13620 913 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 SEPT2Q15019 361 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 ARHGAP44Q17R89 818 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 SRBD1Q8N5C6 995 aaKnown RBP12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 PCDHA12Q9UN75 941 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 PPP1R12BO60237 982 aaPredicted RBP12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 IFT81Q8WYA0 676 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 RMND1Q9NWS8 449 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 PDE4DIPQ5VU43 2346 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 IFNAR1P17181 557 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 RXRBP28702 533 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 CASP14P31944 242 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 GTPBP4Q9BZE4 634 aaKnown RBP12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 MAN1B1Q9UKM7 699 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 RRP9O43818 475 aaKnown RBP12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 EXOSC10Q01780 885 aaKnown RBP12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 GRIK5Q16478 980 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 SHC4Q6S5L8 630 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 DPF2Q92785 391 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 B4DLN1 442 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 CLIC2O15247 247 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 BUB1O43683 1085 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 POLD1P28340 1107 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 MYCT1Q8N699 235 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 USP17L10C9JJH3 530 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 CSF1RP07333 972 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 RRAGAQ7L523 313 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 SMCR8Q8TEV9 937 aaPredicted RBP12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 NSUN4Q96CB9 384 aaKnown RBP12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 ATP8A2Q9NTI2 1148 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 AKR1B1P15121 316 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 VEGFAP15692 232 aaPredicted RBP12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 ALDH1B1P30837 517 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 EVCP57679 992 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 PAXBP1Q9Y5B6 917 aa12.07□□□□□ -0.48
TGFBR1-209ENST00000552516 SLU7O95391 586 aaKnown RBP12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 MYCP01106 439 aaPredicted RBP12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 NIM1KQ8IY84 436 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 CYP27A1Q02318 531 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 ABCB5Q2M3G0 1257 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 NLGN1Q8N2Q7 840 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 FZD1Q9UP38 647 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 NCOA3Q9Y6Q9 1424 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 AGLP35573 1532 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 SOWAHDA6NJG2 315 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 STAT3P40763 770 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 KCTD19Q17RG1 926 aaPredicted RBP12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 ACRBPQ8NEB7 543 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 RICTORQ6R327 1708 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 ATP2C2O75185 946 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 GPBP1Q86WP2 473 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 PIGOQ8TEQ8 1089 aa12.06□□□□□ -0.48
TGFBR1-209ENST00000552516 CXCR5P32302 372 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 PDE6BP35913 854 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 LMAN1P49257 510 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 MRPL44Q9H9J2 332 aaKnown RBP12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 MST1RQ04912 1400 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 NCAPD2Q15021 1401 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 USO1O60763 962 aaKnown RBP12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 NEK8Q86SG6 692 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 NEK11Q8NG66 645 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 IGDCC4Q8TDY8 1250 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 IRX2Q9BZI1 471 aaPredicted RBP12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 DDX25Q9UHL0 483 aaKnown RBP12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 PCDHAC2Q9Y5I4 1007 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 FLOT1O75955 427 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 MORC3Q14149 939 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 NBPF11Q86T75 865 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 ERMNQ8TAM6 284 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 HPS5Q9UPZ3 1129 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 KCNJ18B7U540 433 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 ABCB4P21439 1286 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 KCNJ12Q14500 433 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 KIAA1210Q9ULL0 1709 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 CAVIN2O95810 425 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 BMP15O95972 392 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 RPN1P04843 607 aaKnown RBP12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 CASP7P55210 303 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 CCDC127Q96BQ5 260 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 TSPYL1Q9H0U9 437 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 POLR3EQ9NVU0 708 aa12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 CGNQ9P2M7 1197 aaKnown RBP12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 GOLGB1Q14789 3259 aaKnown RBP12.05□□□□□ -0.48
TGFBR1-209ENST00000552516 DYNC1I1O14576 645 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 TEX33O43247 280 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 TDP2O95551 362 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 OR52Z1P0C646 297 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 PLCG1P19174 1290 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 MRRFQ96E11 262 aaKnown RBP12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 TFR2Q9UP52 801 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 ITSN1Q15811 1721 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 HGSO14964 777 aaPredicted RBP12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 AP5Z1O43299 807 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 KIF5AQ12840 1032 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 SPECC1LQ69YQ0 1117 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 MLKLQ8NB16 471 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms