RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 PDILTQ8N807 584 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.29□□□□□ -1.56
USP44-208ENST00000552440 CXorf38Q8TB03 319 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 RUNDC1Q96C34 613 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 WDR89Q96FK6 387 aaPredicted RBP5.29□□□□□ -1.56
USP44-208ENST00000552440 ACSBG1Q96GR2 724 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 CCDC120Q96HB5 630 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 DNAJC7Q99615 494 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 ZHX3Q9H4I2 956 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 PICK1Q9NRD5 415 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 RNASE1P07998 156 aaKnown RBP5.28□□□□□ -1.56
USP44-208ENST00000552440 CALRP27797 417 aaKnown RBP5.28□□□□□ -1.56
USP44-208ENST00000552440 LMNB2Q03252 620 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 APOBRQ0VD83 1088 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 LRRC41Q15345 812 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 CDC37L1Q7L3B6 337 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 PDZD3Q86UT5 571 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 GOLM1Q8NBJ4 401 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 FLAD1Q8NFF5 587 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 CPLX3Q8WVH0 158 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 ANAPC16Q96DE5 110 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 SHDQ96IW2 340 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 FAM84AQ96KN4 292 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.28□□□□□ -1.56
USP44-208ENST00000552440 TNKS2Q9H2K2 1166 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 MBNL3Q9NUK0 354 aaKnown RBP5.28□□□□□ -1.56
USP44-208ENST00000552440 LMCD1Q9NZU5 365 aa5.28□□□□□ -1.56
USP44-208ENST00000552440 GNAT3A8MTJ3 354 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 TBX3O15119 743 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 FANCGO15287 622 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 KCNQ2O43526 872 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 ATF3P18847 181 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 CNGA1P29973 690 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 SQSTM1Q13501 440 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 TMEM95Q3KNT9 176 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 SNAP47Q5SQN1 464 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 ICE2Q659A1 982 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 AGMOQ6ZNB7 445 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 SLITRK4Q8IW52 837 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 FAM181AQ8N9Y4 354 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 C1orf131Q8NDD1 294 aaKnown RBP5.27□□□□□ -1.57
USP44-208ENST00000552440 ISL2Q96A47 359 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 SRRTQ9BXP5 876 aaKnown RBP5.27□□□□□ -1.57
USP44-208ENST00000552440 FAM126AQ9BYI3 521 aaPredicted RBP5.27□□□□□ -1.57
USP44-208ENST00000552440 INTUQ9ULD6 942 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 TPX2Q9ULW0 747 aaKnown RBP5.27□□□□□ -1.57
USP44-208ENST00000552440 LZTS1Q9Y250 596 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 MSRB2Q9Y3D2 182 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 ENC1O14682 589 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 TRIM37O94972 964 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 SCGB1D2O95969 90 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 TFE3P19532 575 aaPredicted RBP5.27□□□□□ -1.57
USP44-208ENST00000552440 POU3F3P20264 500 aaPredicted RBP5.27□□□□□ -1.57
USP44-208ENST00000552440 AFMP43652 599 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 CLCN7P51798 805 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 CCDC174Q6PII3 467 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 FAM196AQ6ZSG2 479 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 TOP6BLQ8N6T0 577 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 NKD1Q969G9 470 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 NECAB3Q96P71 396 aaPredicted RBP5.27□□□□□ -1.57
USP44-208ENST00000552440 CCDC113Q9H0I3 377 aa5.27□□□□□ -1.57
USP44-208ENST00000552440 ALG1L2C9J202 215 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 SMAD7O15105 426 aaKnown RBP5.26□□□□□ -1.57
USP44-208ENST00000552440 TIMM44O43615 452 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 FAM163BP0C2L3 166 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 PMLP29590 882 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 INO80DQ53TQ3 878 aaPredicted RBP5.26□□□□□ -1.57
USP44-208ENST00000552440 MAP1SQ66K74 1059 aaPredicted RBP5.26□□□□□ -1.57
USP44-208ENST00000552440 TTBK2Q6IQ55 1244 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 CCDC81Q6ZN84 652 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 C14orf80Q86SX3 495 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 WFDC3Q8IUB2 231 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 MYO1HQ8N1T3 1032 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 PPP1R16BQ96T49 567 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 CBX8Q9HC52 389 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 PPT2Q9UMR5 302 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 R3HCC1Q9Y3T6 440 aaKnown RBP5.26□□□□□ -1.57
USP44-208ENST00000552440 CARMIL2Q6F5E8 1435 aa5.26□□□□□ -1.57
USP44-208ENST00000552440 CCDC163A0A0D9SF12 145 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 SHTN1A0MZ66 631 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 LDHCP07864 332 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 RPS26P62854 115 aaKnown RBP5.25□□□□□ -1.57
USP44-208ENST00000552440 ZNF252P-AS1Q0IIN9 211 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 IFRD2Q12894 506 aaPredicted RBP5.25□□□□□ -1.57
USP44-208ENST00000552440 IKZF1Q13422 519 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 TNNI3KQ59H18 835 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 DALRD3Q5D0E6 543 aaKnown RBP5.25□□□□□ -1.57
USP44-208ENST00000552440 ZNF648Q5T619 568 aaPredicted RBP5.25□□□□□ -1.57
USP44-208ENST00000552440 L1TD1Q5T7N2 865 aaKnown RBP5.25□□□□□ -1.57
USP44-208ENST00000552440 ZSWIM9Q86XI8 627 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 IFNL3Q8IZI9 196 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 CELF2-AS1Q8N7Q2 184 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 FAM169BQ8N8A8 192 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 LRRN4CLQ8ND94 238 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 LRRC3Q9BY71 257 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 CACNA2D2Q9NY47 1150 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 CYP8B1Q9UNU6 501 aa5.25□□□□□ -1.57
USP44-208ENST00000552440 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms