RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 TRIM17Q9Y577 477 aa17.74■□□□□ 0.43
SMARCD1-211ENST00000551497 DOCK3Q8IZD9 2030 aa17.74■□□□□ 0.43
SMARCD1-211ENST00000551497 PLA2G6O60733 806 aa17.73■□□□□ 0.43
SMARCD1-211ENST00000551497 CASTP20810 708 aaKnown RBP17.73■□□□□ 0.43
SMARCD1-211ENST00000551497 PSMA5P28066 241 aa17.73■□□□□ 0.43
SMARCD1-211ENST00000551497 BTNL9Q6UXG8 535 aa17.73■□□□□ 0.43
SMARCD1-211ENST00000551497 NFXL1Q6ZNB6 911 aa17.73■□□□□ 0.43
SMARCD1-211ENST00000551497 CTU1Q7Z7A3 348 aaKnown RBP17.73■□□□□ 0.43
SMARCD1-211ENST00000551497 STAG2Q8N3U4 1231 aa17.73■□□□□ 0.43
SMARCD1-211ENST00000551497 MB21D1Q8N884 522 aa17.73■□□□□ 0.43
SMARCD1-211ENST00000551497 MOV10L1Q9BXT6 1211 aaKnown RBP17.73■□□□□ 0.43
SMARCD1-211ENST00000551497 SPATC1LQ9H0A9 340 aa17.73■□□□□ 0.43
SMARCD1-211ENST00000551497 ZSWIM6Q9HCJ5 1215 aa17.73■□□□□ 0.43
SMARCD1-211ENST00000551497 WDR19Q8NEZ3 1342 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 EIF5BO60841 1220 aaKnown RBP17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 ZBED4O75132 1171 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 PARP1P09874 1014 aaKnown RBP17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 RPS6KB1P23443 525 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 LIFRP42702 1097 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 SLC4A3P48751 1232 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 FCGRTP55899 365 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 TROAPQ12815 778 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 CATIPQ7Z7H3 387 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 RAB11FIP4Q86YS3 637 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 ZNF654Q8IZM8 581 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 CPXCR1Q8N123 301 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 TMTC2Q8N394 836 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 NUP133Q8WUM0 1156 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 SLC38A10Q9HBR0 1119 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 RAVER2Q9HCJ3 691 aaKnown RBP17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 BRPF3Q9ULD4 1205 aa17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 COL11A1P12107 1806 aaPredicted RBP17.72■□□□□ 0.43
SMARCD1-211ENST00000551497 PALM3A6NDB9 673 aaPredicted RBP17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 CCDC69A6NI79 296 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 TNPO2O14787 897 aaKnown RBP17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 RXRAP19793 462 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 STAT3P40763 770 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 GRM4Q14833 912 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 ASPRV1Q53RT3 343 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 GPATCH4Q5T3I0 446 aaKnown RBP17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 SYDE2Q5VT97 1194 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 Q6ZUG5 572 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 RUFY3Q7L099 469 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 CCAR1Q8IX12 1150 aaKnown RBP17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 UPF3BQ9BZI7 483 aaKnown RBP17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 TM6SF1Q9BZW5 370 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 VAT1LQ9HCJ6 419 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 MAD2L2Q9UI95 211 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 ZNF214Q9UL59 606 aaPredicted RBP17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 GABRQQ9UN88 632 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 RIPK3Q9Y572 518 aa17.71■□□□□ 0.43
SMARCD1-211ENST00000551497 MGAMO43451 1857 aa17.7■□□□□ 0.42
SMARCD1-211ENST00000551497 KLRF2D3W0D1 207 aa17.7■□□□□ 0.42
SMARCD1-211ENST00000551497 ERCC3P19447 782 aa17.7■□□□□ 0.42
SMARCD1-211ENST00000551497 CCNA1P78396 465 aa17.7■□□□□ 0.42
SMARCD1-211ENST00000551497 ARHGEF6Q15052 776 aa17.7■□□□□ 0.42
SMARCD1-211ENST00000551497 WDR78Q5VTH9 848 aa17.7■□□□□ 0.42
SMARCD1-211ENST00000551497 CCDC174Q6PII3 467 aa17.7■□□□□ 0.42
SMARCD1-211ENST00000551497 AGBL1Q96MI9 1066 aa17.7■□□□□ 0.42
SMARCD1-211ENST00000551497 CTDP1Q9Y5B0 961 aaPredicted RBP17.7■□□□□ 0.42
SMARCD1-211ENST00000551497 ZNF536O15090 1300 aa17.7■□□□□ 0.42
SMARCD1-211ENST00000551497 MAPK4P31152 587 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 FGD1P98174 961 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 SLC35G1Q2M3R5 365 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 GPR142Q7Z601 462 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 SGMS1Q86VZ5 419 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 NCAPG2Q86XI2 1143 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 RIOX2Q8IUF8 465 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 CCDC144CPQ8IYA2 1237 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 ADGRF4Q8IZF3 695 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 LARP6Q9BRS8 491 aaKnown RBP17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 MCOLN1Q9GZU1 580 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 SRRDQ9UH36 339 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 GJD2Q9UKL4 321 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 PTPN22Q9Y2R2 807 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 SLC12A7Q9Y666 1083 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 CYP46A1Q9Y6A2 500 aa17.69■□□□□ 0.42
SMARCD1-211ENST00000551497 A0A0G2JMZ2 1700 aa17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 SMCHD1A6NHR9 2005 aa17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 DDAH1O94760 285 aa17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 TAL1P17542 331 aaPredicted RBP17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 HOXD10P28358 340 aa17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 ANAPC15P60006 121 aa17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 PRKCZQ05513 592 aa17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 APOBRQ0VD83 1088 aa17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 SNRNP48Q6IEG0 339 aaKnown RBP17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 PLEKHH3Q7Z736 793 aa17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 BRF1Q92994 677 aa17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 COA7Q96BR5 231 aa17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 RANBP17Q9H2T7 1088 aaKnown RBP17.68■□□□□ 0.42
SMARCD1-211ENST00000551497 KLF18A0A0U1RQI7 1052 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 ATP2A1O14983 1001 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 GNRH1P01148 92 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 FDX1P10109 184 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 FLT3LGP49771 235 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 APOA5Q6Q788 366 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 FANCBQ8NB91 859 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 SHCBP1Q8NEM2 672 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 IL17RAQ96F46 866 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms