RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 ROBO3Q96MS0 1386 aa21.41■■□□□ 1.02
PRPF40B-215ENST00000551418 SNAI1O95863 264 aaPredicted RBP21.41■■□□□ 1.02
PRPF40B-215ENST00000551418 SNRNP48Q6IEG0 339 aaKnown RBP21.41■■□□□ 1.02
PRPF40B-215ENST00000551418 GIMAP6Q6P9H5 292 aa21.41■■□□□ 1.02
PRPF40B-215ENST00000551418 CPXCR1Q8N123 301 aa21.41■■□□□ 1.02
PRPF40B-215ENST00000551418 OTUD7AQ8TE49 926 aaPredicted RBP21.41■■□□□ 1.02
PRPF40B-215ENST00000551418 MCM3APO60318 1980 aa21.41■■□□□ 1.02
PRPF40B-215ENST00000551418 EPHB4P54760 987 aa21.4■■□□□ 1.02
PRPF40B-215ENST00000551418 FAM109BQ6ICB4 259 aaPredicted RBP21.4■■□□□ 1.02
PRPF40B-215ENST00000551418 CEP95Q96GE4 821 aa21.4■■□□□ 1.02
PRPF40B-215ENST00000551418 TEX13BQ9BXU2 312 aa21.4■■□□□ 1.02
PRPF40B-215ENST00000551418 RAVER2Q9HCJ3 691 aaKnown RBP21.4■■□□□ 1.02
PRPF40B-215ENST00000551418 NRBP1Q9UHY1 535 aa21.4■■□□□ 1.02
PRPF40B-215ENST00000551418 DNAJC25-GNG10A0A024R161 153 aa21.39■■□□□ 1.01
PRPF40B-215ENST00000551418 ADAMTS4O75173 837 aa21.39■■□□□ 1.01
PRPF40B-215ENST00000551418 C1orf53Q5VUE5 145 aa21.39■■□□□ 1.01
PRPF40B-215ENST00000551418 LRRC47Q8N1G4 583 aaKnown RBP21.39■■□□□ 1.01
PRPF40B-215ENST00000551418 KIFC2Q96AC6 838 aa21.39■■□□□ 1.01
PRPF40B-215ENST00000551418 CHMP4CQ96CF2 233 aa21.39■■□□□ 1.01
PRPF40B-215ENST00000551418 A0A1W2PQ45 241 aaPredicted RBP21.38■■□□□ 1.01
PRPF40B-215ENST00000551418 A0A1W2PQY0 241 aa21.38■■□□□ 1.01
PRPF40B-215ENST00000551418 MYADML2A6NDP7 307 aa21.38■■□□□ 1.01
PRPF40B-215ENST00000551418 APPP05067 770 aa21.38■■□□□ 1.01
PRPF40B-215ENST00000551418 TDO2P48775 406 aa21.38■■□□□ 1.01
PRPF40B-215ENST00000551418 IFNL3Q8IZI9 196 aa21.38■■□□□ 1.01
PRPF40B-215ENST00000551418 PRPF38AQ8NAV1 312 aaKnown RBP21.38■■□□□ 1.01
PRPF40B-215ENST00000551418 DDX11Q96FC9 970 aa21.38■■□□□ 1.01
PRPF40B-215ENST00000551418 FGD4Q96M96 766 aa21.38■■□□□ 1.01
PRPF40B-215ENST00000551418 PCDHB15Q9Y5E8 787 aa21.38■■□□□ 1.01
PRPF40B-215ENST00000551418 CUL9Q8IWT3 2517 aa21.38■■□□□ 1.01
PRPF40B-215ENST00000551418 ADCY6O43306 1168 aa21.37■■□□□ 1.01
PRPF40B-215ENST00000551418 PQBP1O60828 265 aaKnown RBP21.37■■□□□ 1.01
PRPF40B-215ENST00000551418 AKR1A1P14550 325 aa21.37■■□□□ 1.01
PRPF40B-215ENST00000551418 RNF180Q86T96 592 aa21.37■■□□□ 1.01
PRPF40B-215ENST00000551418 ZNF444Q8N0Y2 327 aaPredicted RBP21.37■■□□□ 1.01
PRPF40B-215ENST00000551418 MKL1Q969V6 931 aa21.37■■□□□ 1.01
PRPF40B-215ENST00000551418 MTMR4Q9NYA4 1195 aa21.37■■□□□ 1.01
PRPF40B-215ENST00000551418 CNPY2Q9Y2B0 182 aa21.37■■□□□ 1.01
PRPF40B-215ENST00000551418 SYNRGQ9UMZ2 1314 aa21.36■■□□□ 1.01
PRPF40B-215ENST00000551418 PATL2C9JE40 543 aaKnown RBP21.36■■□□□ 1.01
PRPF40B-215ENST00000551418 COPB2P35606 906 aa21.36■■□□□ 1.01
PRPF40B-215ENST00000551418 KLHDC9Q8NEP7 349 aa21.36■■□□□ 1.01
PRPF40B-215ENST00000551418 INCENPQ9NQS7 918 aa21.36■■□□□ 1.01
PRPF40B-215ENST00000551418 ZHX1Q9UKY1 873 aaPredicted RBP21.36■■□□□ 1.01
PRPF40B-215ENST00000551418 ATP2A1O14983 1001 aa21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 ZBED4O75132 1171 aa21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 ZFYP08048 801 aaPredicted RBP21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 CLTBP09497 229 aa21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 ACLYP53396 1101 aa21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 KCNA10Q16322 511 aa21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 CCSAPQ6IQ19 270 aaPredicted RBP21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 MAMDC4Q6UXC1 1216 aa21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 PI4K2BQ8TCG2 481 aa21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 GPATCH3Q96I76 525 aa21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 TTYH1Q9H313 450 aaPredicted RBP21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 SEMA6BQ9H3T3 888 aa21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 SLC38A10Q9HBR0 1119 aa21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 TACC3Q9Y6A5 838 aa21.35■■□□□ 1.01
PRPF40B-215ENST00000551418 KIAA0355O15063 1070 aa21.34■■□□□ 1.01
PRPF40B-215ENST00000551418 GNAT2P19087 354 aa21.34■■□□□ 1.01
PRPF40B-215ENST00000551418 FAAP100Q0VG06 881 aa21.34■■□□□ 1.01
PRPF40B-215ENST00000551418 ZNF697Q5TEC3 545 aa21.34■■□□□ 1.01
PRPF40B-215ENST00000551418 SLFN13Q68D06 897 aa21.34■■□□□ 1.01
PRPF40B-215ENST00000551418 NEDD1Q8NHV4 660 aa21.34■■□□□ 1.01
PRPF40B-215ENST00000551418 CDX2Q99626 313 aaPredicted RBP21.34■■□□□ 1.01
PRPF40B-215ENST00000551418 FAM184BQ9ULE4 1060 aa21.34■■□□□ 1.01
PRPF40B-215ENST00000551418 UNC80Q8N2C7 3258 aa21.34■■□□□ 1.01
PRPF40B-215ENST00000551418 SYNGAP1Q96PV0 1343 aa21.33■■□□□ 1.01
PRPF40B-215ENST00000551418 FOXP2O15409 715 aa21.33■■□□□ 1.01
PRPF40B-215ENST00000551418 TTLL1O95922 423 aa21.33■■□□□ 1.01
PRPF40B-215ENST00000551418 TFAP4Q01664 338 aa21.33■■□□□ 1.01
PRPF40B-215ENST00000551418 CNTN2Q02246 1040 aa21.33■■□□□ 1.01
PRPF40B-215ENST00000551418 CCDC129Q6ZRS4 1044 aa21.33■■□□□ 1.01
PRPF40B-215ENST00000551418 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.33■■□□□ 1.01
PRPF40B-215ENST00000551418 FEM1BQ9UK73 627 aa21.33■■□□□ 1.01
PRPF40B-215ENST00000551418 DDX49Q9Y6V7 483 aaKnown RBP21.33■■□□□ 1.01
PRPF40B-215ENST00000551418 SNAP25P60880 206 aa21.32■■□□□ 1
PRPF40B-215ENST00000551418 ACVR2BQ13705 512 aa21.32■■□□□ 1
PRPF40B-215ENST00000551418 ZMYM1Q5SVZ6 1142 aa21.32■■□□□ 1
PRPF40B-215ENST00000551418 RASGRP2Q7LDG7 609 aa21.32■■□□□ 1
PRPF40B-215ENST00000551418 MSL3Q8N5Y2 521 aaKnown RBP21.32■■□□□ 1
PRPF40B-215ENST00000551418 GMCL1P1Q8NEA9 526 aa21.32■■□□□ 1
PRPF40B-215ENST00000551418 TSEN34Q9BSV6 310 aaKnown RBP21.32■■□□□ 1
PRPF40B-215ENST00000551418 HOMER2Q9NSB8 354 aa21.32■■□□□ 1
PRPF40B-215ENST00000551418 TMEM39AQ9NV64 488 aa21.32■■□□□ 1
PRPF40B-215ENST00000551418 CTDP1Q9Y5B0 961 aaPredicted RBP21.32■■□□□ 1
PRPF40B-215ENST00000551418 TMEM232C9JQI7 657 aa21.31■■□□□ 1
PRPF40B-215ENST00000551418 TSPY3P0CV98 308 aa21.31■■□□□ 1
PRPF40B-215ENST00000551418 TSPY8P0CW00 308 aa21.31■■□□□ 1
PRPF40B-215ENST00000551418 BMP3P12645 472 aa21.31■■□□□ 1
PRPF40B-215ENST00000551418 RAG1P15918 1043 aa21.31■■□□□ 1
PRPF40B-215ENST00000551418 PTGS1P23219 599 aa21.31■■□□□ 1
PRPF40B-215ENST00000551418 PPARAQ07869 468 aa21.31■■□□□ 1
PRPF40B-215ENST00000551418 CCDC144BQ3MJ40 725 aa21.31■■□□□ 1
PRPF40B-215ENST00000551418 ANKRD35Q8N283 1001 aa21.31■■□□□ 1
PRPF40B-215ENST00000551418 AGBL1Q96MI9 1066 aa21.31■■□□□ 1
PRPF40B-215ENST00000551418 STARD7Q9NQZ5 370 aa21.31■■□□□ 1
PRPF40B-215ENST00000551418 NMT2O60551 498 aa21.3■■□□□ 1
PRPF40B-215ENST00000551418 DUSP11O75319 330 aaKnown RBP21.3■■□□□ 1
PRPF40B-215ENST00000551418 CTDSPL2Q05D32 466 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms