RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	DDX20	Q9UHI6	824 aa	Known RBP	11.44	□□□□□ -0.58
PFKM-222	ENST00000551339	PFAS	O15067	1338 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	TSPY2	A6NKD2	308 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	ATP2A1	O14983	1001 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	ORC4	O43929	436 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	MSC	O60682	206 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	PGK2	P07205	417 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	BMP3	P12645	472 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	CYBA	P13498	195 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	CNGA1	P29973	690 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	COPB2	P35606	906 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	NOV	P48745	357 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	PRAMEF19	Q5SWL8	479 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	CWC27	Q6UX04	472 aa	Known RBP	11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	CHRDL2	Q6WN34	429 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	KIFC2	Q96AC6	838 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	TEX13B	Q9BXU2	312 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	SLC38A10	Q9HBR0	1119 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	FEM1B	Q9UK73	627 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	DIS3	Q9Y2L1	958 aa	Known RBP	11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	RIPK3	Q9Y572	518 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	PARP14	Q460N5	1801 aa		11.43	□□□□□ -0.58
PFKM-222	ENST00000551339	RANBP6	O60518	1105 aa	Known RBP	11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	NMT2	O60551	498 aa		11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	ZBED4	O75132	1171 aa		11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	FXR1	P51114	621 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	KCTD2	Q14681	263 aa		11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	ZNF792	Q3KQV3	632 aa		11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	PPP4R3B	Q5MIZ7	849 aa		11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	SNRNP48	Q6IEG0	339 aa	Known RBP	11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	CPXCR1	Q8N123	301 aa		11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	RUFY2	Q8WXA3	655 aa		11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	GMCL1	Q96IK5	515 aa		11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	PRO3102	Q9H379	93 aa		11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	RBM27	Q9P2N5	1060 aa	Known RBP	11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	STX8	Q9UNK0	236 aa		11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	ZNF236	Q9UL36	1845 aa		11.42	□□□□□ -0.58
PFKM-222	ENST00000551339	CEP290	O15078	2479 aa		11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	TMEM232	C9JQI7	657 aa		11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	SEPT4	O43236	478 aa		11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	PC	P11498	1178 aa	Known RBP	11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	MCC	P23508	829 aa		11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	CHML	P26374	656 aa		11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	SLC1A4	P43007	532 aa		11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	OAZ1	P54368	228 aa		11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	C7orf61	Q8IZ16	206 aa		11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	STAG1	Q8WVM7	1258 aa		11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	CHMP4C	Q96CF2	233 aa		11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	RAVER2	Q9HCJ3	691 aa	Known RBP	11.41	□□□□□ -0.58
PFKM-222	ENST00000551339	RAD50	Q92878	1312 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	COL11A1	P12107	1806 aa	Predicted RBP	11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	DNAJC25-GNG10	A0A024R161	153 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	PLA2G6	O60733	806 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	FDX1	P10109	184 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	SLC4A3	P48751	1232 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	NT5C2	P49902	561 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	STAT2	P52630	851 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	HAND2	P61296	217 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	BMP2KL	Q5H9B9	411 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	RCSD1	Q6JBY9	416 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	FAM160B2	Q86V87	743 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	CHURC1	Q8WUH1	139 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	DDX11	Q96FC9	970 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	TINF2	Q9BSI4	451 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	DSCC1	Q9BVC3	393 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	TCP11L1	Q9NUJ3	509 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	NRBP1	Q9UHY1	535 aa		11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.4	□□□□□ -0.58
PFKM-222	ENST00000551339	MYH4	Q9Y623	1939 aa		11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	DNM1L	O00429	736 aa		11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	TAL1	P17542	331 aa	Predicted RBP	11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	LRRC26	Q2I0M4	334 aa		11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	RRP12	Q5JTH9	1297 aa	Known RBP	11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	AKNAD1	Q5T1N1	836 aa		11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	GJC2	Q5T442	439 aa	Predicted RBP	11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	ANO1	Q5XXA6	986 aa		11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	KCTD1	Q719H9	257 aa		11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	ARRDC4	Q8NCT1	418 aa		11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	CHST13	Q8NET6	341 aa		11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	TMEM47	Q9BQJ4	181 aa		11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	TOMM22	Q9NS69	142 aa		11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	CTNNA3	Q9UI47	895 aa		11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.39	□□□□□ -0.59
PFKM-222	ENST00000551339	ZNF536	O15090	1300 aa		11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	ZNF213	O14771	459 aa		11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	SNAI1	O95863	264 aa	Predicted RBP	11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	TOP1	P11387	765 aa	Known RBP	11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	SYN1	P17600	705 aa		11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	MAMDC4	Q6UXC1	1216 aa		11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	MFSD6	Q6ZSS7	791 aa		11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	RASGRP2	Q7LDG7	609 aa		11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	TBC1D10C	Q8IV04	446 aa		11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	MSL3	Q8N5Y2	521 aa	Known RBP	11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	AGBL1	Q96MI9	1066 aa		11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	TTC14	Q96N46	770 aa		11.38	□□□□□ -0.59
PFKM-222	ENST00000551339	GDF15	Q99988	308 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms