RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 ADD2P35612 726 aa22.36■■□□□ 1.17
RPAP3-207ENST00000551293 SNRNP48Q6IEG0 339 aaKnown RBP22.36■■□□□ 1.17
RPAP3-207ENST00000551293 C16orf86Q6ZW13 317 aa22.36■■□□□ 1.17
RPAP3-207ENST00000551293 CLASRPQ8N2M8 674 aaKnown RBP22.36■■□□□ 1.17
RPAP3-207ENST00000551293 NUP133Q8WUM0 1156 aa22.36■■□□□ 1.17
RPAP3-207ENST00000551293 DDX11Q96FC9 970 aa22.36■■□□□ 1.17
RPAP3-207ENST00000551293 TOX2Q96NM4 488 aa22.36■■□□□ 1.17
RPAP3-207ENST00000551293 TSEN34Q9BSV6 310 aaKnown RBP22.36■■□□□ 1.17
RPAP3-207ENST00000551293 PPP1R12CQ9BZL4 782 aa22.36■■□□□ 1.17
RPAP3-207ENST00000551293 PAG1Q9NWQ8 432 aa22.36■■□□□ 1.17
RPAP3-207ENST00000551293 FAM184BQ9ULE4 1060 aa22.36■■□□□ 1.17
RPAP3-207ENST00000551293 MUC3AQ02505 3323 aa22.36■■□□□ 1.17
RPAP3-207ENST00000551293 MYH8P13535 1937 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 BAZ2AQ9UIF9 1905 aaKnown RBP22.35■■□□□ 1.17
RPAP3-207ENST00000551293 PLXNA1Q9UIW2 1896 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 TNFRSF10AO00220 468 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 ADCY6O43306 1168 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 CCDC85BQ15834 202 aaPredicted RBP22.35■■□□□ 1.17
RPAP3-207ENST00000551293 AMOTL1Q8IY63 956 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 CPXCR1Q8N123 301 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 KLHDC9Q8NEP7 349 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 PBX4Q9BYU1 374 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 KANSL2Q9H9L4 492 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 TBX21Q9UL17 535 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 SLC4A4Q9Y6R1 1079 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 ROBO3Q96MS0 1386 aa22.35■■□□□ 1.17
RPAP3-207ENST00000551293 CCER2I3L3R5 266 aa22.34■■□□□ 1.17
RPAP3-207ENST00000551293 C6orf222P0C671 652 aaPredicted RBP22.34■■□□□ 1.17
RPAP3-207ENST00000551293 CSF2RAP15509 400 aa22.34■■□□□ 1.17
RPAP3-207ENST00000551293 TMEM240Q5SV17 173 aa22.34■■□□□ 1.17
RPAP3-207ENST00000551293 CCSAPQ6IQ19 270 aaPredicted RBP22.34■■□□□ 1.17
RPAP3-207ENST00000551293 SLF1Q9BQI6 1058 aa22.34■■□□□ 1.17
RPAP3-207ENST00000551293 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.34■■□□□ 1.17
RPAP3-207ENST00000551293 HSP90AB4PQ58FF6 505 aa22.33■■□□□ 1.17
RPAP3-207ENST00000551293 MFSD5Q6N075 450 aa22.33■■□□□ 1.17
RPAP3-207ENST00000551293 CTR9Q6PD62 1173 aa22.33■■□□□ 1.17
RPAP3-207ENST00000551293 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.33■■□□□ 1.17
RPAP3-207ENST00000551293 GLT1D1Q96MS3 346 aa22.33■■□□□ 1.17
RPAP3-207ENST00000551293 GAS2L1Q99501 681 aaPredicted RBP22.33■■□□□ 1.17
RPAP3-207ENST00000551293 MOXD2PA6NHM9 499 aa22.32■■□□□ 1.16
RPAP3-207ENST00000551293 ASGR1P07306 291 aa22.32■■□□□ 1.16
RPAP3-207ENST00000551293 KIF1BPQ96EK5 621 aa22.32■■□□□ 1.16
RPAP3-207ENST00000551293 TEX13BQ9BXU2 312 aa22.32■■□□□ 1.16
RPAP3-207ENST00000551293 IGFBP4P22692 258 aa22.31■■□□□ 1.16
RPAP3-207ENST00000551293 COPB2P35606 906 aa22.31■■□□□ 1.16
RPAP3-207ENST00000551293 PPIGQ13427 754 aaKnown RBP eCLIP22.31■■□□□ 1.16
RPAP3-207ENST00000551293 ACVR2BQ13705 512 aa22.31■■□□□ 1.16
RPAP3-207ENST00000551293 ZNF365Q70YC5 407 aa22.31■■□□□ 1.16
RPAP3-207ENST00000551293 DDRGK1Q96HY6 314 aa22.31■■□□□ 1.16
RPAP3-207ENST00000551293 RAVER2Q9HCJ3 691 aaKnown RBP22.31■■□□□ 1.16
RPAP3-207ENST00000551293 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.31■■□□□ 1.16
RPAP3-207ENST00000551293 SYNGAP1Q96PV0 1343 aa22.31■■□□□ 1.16
RPAP3-207ENST00000551293 CHD9Q3L8U1 2897 aa22.3■■□□□ 1.16
RPAP3-207ENST00000551293 DUSP11O75319 330 aaKnown RBP22.3■■□□□ 1.16
RPAP3-207ENST00000551293 CYP2C18P33260 490 aa22.3■■□□□ 1.16
RPAP3-207ENST00000551293 CDK7P50613 346 aa22.3■■□□□ 1.16
RPAP3-207ENST00000551293 ADGRE1Q14246 886 aa22.3■■□□□ 1.16
RPAP3-207ENST00000551293 CCDC144BQ3MJ40 725 aa22.3■■□□□ 1.16
RPAP3-207ENST00000551293 KIFC2Q96AC6 838 aa22.3■■□□□ 1.16
RPAP3-207ENST00000551293 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.3■■□□□ 1.16
RPAP3-207ENST00000551293 PUS7LQ9H0K6 701 aaKnown RBP22.3■■□□□ 1.16
RPAP3-207ENST00000551293 DNAJC25-GNG10A0A024R161 153 aa22.29■■□□□ 1.16
RPAP3-207ENST00000551293 F5H6K3 240 aa22.29■■□□□ 1.16
RPAP3-207ENST00000551293 NDUFB10O96000 172 aa22.29■■□□□ 1.16
RPAP3-207ENST00000551293 BEX3Q00994 111 aa22.29■■□□□ 1.16
RPAP3-207ENST00000551293 KLRC3Q07444 240 aa22.29■■□□□ 1.16
RPAP3-207ENST00000551293 GNASQ5JWF2 1037 aa22.29■■□□□ 1.16
RPAP3-207ENST00000551293 CHMP4CQ96CF2 233 aa22.29■■□□□ 1.16
RPAP3-207ENST00000551293 CXXC1Q9P0U4 656 aaPredicted RBP22.29■■□□□ 1.16
RPAP3-207ENST00000551293 CTDP1Q9Y5B0 961 aaPredicted RBP22.29■■□□□ 1.16
RPAP3-207ENST00000551293 ELP1O95163 1332 aa22.29■■□□□ 1.16
RPAP3-207ENST00000551293 ARVCFO00192 962 aa22.28■■□□□ 1.16
RPAP3-207ENST00000551293 PTGS1P23219 599 aa22.28■■□□□ 1.16
RPAP3-207ENST00000551293 MAMDC4Q6UXC1 1216 aa22.28■■□□□ 1.16
RPAP3-207ENST00000551293 SIRT2Q8IXJ6 389 aa22.28■■□□□ 1.16
RPAP3-207ENST00000551293 ANKRD35Q8N283 1001 aa22.28■■□□□ 1.16
RPAP3-207ENST00000551293 TMEM199Q8N511 208 aa22.28■■□□□ 1.16
RPAP3-207ENST00000551293 MSL3Q8N5Y2 521 aaKnown RBP22.28■■□□□ 1.16
RPAP3-207ENST00000551293 FGD4Q96M96 766 aa22.28■■□□□ 1.16
RPAP3-207ENST00000551293 NKX2-4Q9H2Z4 354 aa22.28■■□□□ 1.16
RPAP3-207ENST00000551293 HOMER2Q9NSB8 354 aa22.28■■□□□ 1.16
RPAP3-207ENST00000551293 MROH7Q68CQ1 1323 aa22.28■■□□□ 1.16
RPAP3-207ENST00000551293 A0A0U1RQG5 324 aaPredicted RBP22.27■■□□□ 1.16
RPAP3-207ENST00000551293 ZBED4O75132 1171 aa22.27■■□□□ 1.16
RPAP3-207ENST00000551293 RASIP1Q5U651 963 aa22.27■■□□□ 1.16
RPAP3-207ENST00000551293 CCDC174Q6PII3 467 aa22.27■■□□□ 1.16
RPAP3-207ENST00000551293 FAM126BQ8IXS8 530 aa22.27■■□□□ 1.16
RPAP3-207ENST00000551293 PCSK9Q8NBP7 692 aaKnown RBP22.27■■□□□ 1.16
RPAP3-207ENST00000551293 ADAMTS19Q8TE59 1207 aa22.27■■□□□ 1.16
RPAP3-207ENST00000551293 ASB2Q96Q27 587 aa22.27■■□□□ 1.16
RPAP3-207ENST00000551293 HAUS7Q99871 368 aa22.27■■□□□ 1.16
RPAP3-207ENST00000551293 SPC25Q9HBM1 224 aa22.27■■□□□ 1.16
RPAP3-207ENST00000551293 THEGQ9P2T0 379 aa22.27■■□□□ 1.16
RPAP3-207ENST00000551293 CLIP2Q9UDT6 1046 aa22.27■■□□□ 1.16
RPAP3-207ENST00000551293 UMODL1Q5DID0 1318 aa22.27■■□□□ 1.16
RPAP3-207ENST00000551293 MINDY4BA8MYZ0 360 aa22.26■■□□□ 1.15
RPAP3-207ENST00000551293 ATP5JP18859 108 aa22.26■■□□□ 1.15
RPAP3-207ENST00000551293 RASA1P20936 1047 aa22.26■■□□□ 1.15
RPAP3-207ENST00000551293 CST5P28325 142 aaPredicted RBP22.26■■□□□ 1.15
RPAP3-207ENST00000551293 HNRNPUQ00839 825 aaKnown RBP eCLIP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms