RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 PCDHA4Q9UN74 947 aa13.35□□□□□ -0.27
TROAP-215ENST00000551245 CUTAO60888 179 aa13.34□□□□□ -0.27
TROAP-215ENST00000551245 NOLC1Q14978 699 aaKnown RBP eCLIP13.34□□□□□ -0.27
TROAP-215ENST00000551245 RBM26Q5T8P6 1007 aaKnown RBP13.34□□□□□ -0.27
TROAP-215ENST00000551245 BLIDQ8IZY5 108 aa13.34□□□□□ -0.27
TROAP-215ENST00000551245 GMCL1P1Q8NEA9 526 aa13.34□□□□□ -0.27
TROAP-215ENST00000551245 CCDC12Q8WUD4 166 aaPredicted RBP13.34□□□□□ -0.27
TROAP-215ENST00000551245 USP25Q9UHP3 1055 aa13.34□□□□□ -0.27
TROAP-215ENST00000551245 CTAGE5O15320 804 aa13.34□□□□□ -0.27
TROAP-215ENST00000551245 BMP15O95972 392 aa13.34□□□□□ -0.27
TROAP-215ENST00000551245 SEPT2Q15019 361 aa13.34□□□□□ -0.27
TROAP-215ENST00000551245 MAP3K11Q16584 847 aa13.34□□□□□ -0.27
TROAP-215ENST00000551245 NBPF9Q3BBW0 867 aa13.34□□□□□ -0.27
TROAP-215ENST00000551245 FMR1NBQ8N0W7 255 aaPredicted RBP13.34□□□□□ -0.27
TROAP-215ENST00000551245 ESYT2A0FGR8 921 aa13.33□□□□□ -0.27
TROAP-215ENST00000551245 TNNI2P48788 182 aa13.33□□□□□ -0.27
TROAP-215ENST00000551245 GMPSP49915 693 aaPredicted RBP13.33□□□□□ -0.27
TROAP-215ENST00000551245 RRP1BQ14684 758 aaKnown RBP13.33□□□□□ -0.27
TROAP-215ENST00000551245 TYW1BQ6NUM6 668 aa13.33□□□□□ -0.27
TROAP-215ENST00000551245 PIBF1Q8WXW3 757 aa13.33□□□□□ -0.27
TROAP-215ENST00000551245 GPKOWQ92917 476 aaPredicted RBP eCLIP13.33□□□□□ -0.27
TROAP-215ENST00000551245 MTMR8Q96EF0 704 aa13.33□□□□□ -0.27
TROAP-215ENST00000551245 ZMYND12Q9H0C1 365 aa13.33□□□□□ -0.27
TROAP-215ENST00000551245 TNMDQ9H2S6 317 aa13.33□□□□□ -0.27
TROAP-215ENST00000551245 MTMR7Q9Y216 660 aa13.33□□□□□ -0.27
TROAP-215ENST00000551245 ATAD5Q96QE3 1844 aa13.33□□□□□ -0.28
TROAP-215ENST00000551245 ADCY5O95622 1261 aa13.33□□□□□ -0.28
TROAP-215ENST00000551245 ICA1Q05084 483 aa13.33□□□□□ -0.28
TROAP-215ENST00000551245 EARS2Q5JPH6 523 aaKnown RBP13.33□□□□□ -0.28
TROAP-215ENST00000551245 TTC12Q9H892 705 aaPredicted RBP13.33□□□□□ -0.28
TROAP-215ENST00000551245 VEZTQ9HBM0 779 aa13.33□□□□□ -0.28
TROAP-215ENST00000551245 SEC63Q9UGP8 760 aaKnown RBP13.33□□□□□ -0.28
TROAP-215ENST00000551245 PCDHB6Q9Y5E3 794 aa13.33□□□□□ -0.28
TROAP-215ENST00000551245 SHTN1A0MZ66 631 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 TRIM75PA6NK02 468 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 PTPREP23469 700 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 JAG1P78504 1218 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 SMAP1Q8IYB5 467 aaPredicted RBP13.32□□□□□ -0.28
TROAP-215ENST00000551245 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
TROAP-215ENST00000551245 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 PIGSQ96S52 555 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 FRMPD2Q68DX3 1309 aaPredicted RBP13.32□□□□□ -0.28
TROAP-215ENST00000551245 TNFAIP1Q13829 316 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 SHROOM1Q2M3G4 852 aaPredicted RBP13.32□□□□□ -0.28
TROAP-215ENST00000551245 RESP18Q5W5W9 173 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 HEATR3Q7Z4Q2 680 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 KRI1Q8N9T8 703 aaKnown RBP13.32□□□□□ -0.28
TROAP-215ENST00000551245 TSC1Q92574 1164 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 TMEM39BQ9GZU3 492 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 UBA5Q9GZZ9 404 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 CPVLQ9H3G5 476 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 FBXO2Q9UK22 296 aaPredicted RBP13.32□□□□□ -0.28
TROAP-215ENST00000551245 HPSEQ9Y251 543 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 GDF11O95390 407 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 GH2P01242 217 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 MARCKSP29966 332 aaPredicted RBP13.32□□□□□ -0.28
TROAP-215ENST00000551245 PPP1R18Q6NYC8 613 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 MICALL2Q8IY33 904 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 PRIMPOLQ96LW4 560 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 CCDC94Q9BW85 323 aaPredicted RBP13.32□□□□□ -0.28
TROAP-215ENST00000551245 JMJD4Q9H9V9 463 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 GPCPD1Q9NPB8 672 aa13.32□□□□□ -0.28
TROAP-215ENST00000551245 CNOT7Q9UIV1 285 aaKnown RBP13.32□□□□□ -0.28
TROAP-215ENST00000551245 SRPRBQ9Y5M8 271 aaKnown RBP13.32□□□□□ -0.28
TROAP-215ENST00000551245 PNMA6FA0A0J9YX94 578 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 KINO60870 393 aaKnown RBP13.31□□□□□ -0.28
TROAP-215ENST00000551245 LMNB1P20700 586 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 NDUFA8P51970 172 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 SLFN13Q68D06 897 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 C17orf53Q8N3J3 647 aaPredicted RBP13.31□□□□□ -0.28
TROAP-215ENST00000551245 TIGD1Q96MW7 591 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 GNA11P29992 359 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 ATP2B2Q01814 1243 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 TTC38Q5R3I4 469 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 SHC4Q6S5L8 630 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 ADGRF4Q8IZF3 695 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 C6orf50Q9HD87 102 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 PCDHA6Q9UN73 950 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 PCDHA8Q9Y5H6 950 aa13.31□□□□□ -0.28
TROAP-215ENST00000551245 A0A1B0GVL5 298 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 ADAMTS3O15072 1205 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 CCDC192P0DO97 292 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 NAPAP54920 295 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 TEPSINQ96N21 525 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 FHDC1Q9C0D6 1143 aaPredicted RBP13.3□□□□□ -0.28
TROAP-215ENST00000551245 F5H6K3 240 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 PFKFB1P16118 471 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 KLRC3Q07444 240 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 CAMK4Q16566 473 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 NOM1Q5C9Z4 860 aaKnown RBP13.3□□□□□ -0.28
TROAP-215ENST00000551245 FERMT2Q96AC1 680 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 VAT1LQ9HCJ6 419 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 PRDM10Q9NQV6 1147 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 GINM1Q9NU53 330 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 ZBTB21Q9ULJ3 1066 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 GJA3Q9Y6H8 435 aa13.3□□□□□ -0.28
TROAP-215ENST00000551245 EGFRP00533 1210 aa13.29□□□□□ -0.28
TROAP-215ENST00000551245 CAP2P40123 477 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms