RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 USP40Q9NVE5 1235 aa11.63□□□□□ -0.55
CNOT2-229ENST00000551179 hCG_1642624A0A1W2PR95 340 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 USP17L3A6NCW0 530 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 USP17L4A6NCW7 530 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 KLRF2D3W0D1 207 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 UBE2Q2LH0YL09 131 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 PTGS1P23219 599 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 LONP1P36776 959 aaKnown RBP11.62□□□□□ -0.55
CNOT2-229ENST00000551179 TOB1P50616 345 aaPredicted RBP11.62□□□□□ -0.55
CNOT2-229ENST00000551179 PLCD1P51178 756 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 PNOCQ13519 176 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 NOLC1Q14978 699 aaKnown RBP eCLIP11.62□□□□□ -0.55
CNOT2-229ENST00000551179 RCSD1Q6JBY9 416 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 PPP1R18Q6NYC8 613 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 USP17L1Q7RTZ2 530 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 CCDC186Q7Z3E2 898 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 IQUBQ8NA54 791 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 DHX58Q96C10 678 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 CCDC17Q96LX7 622 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 DHX36Q9H2U1 1008 aaKnown RBP11.62□□□□□ -0.55
CNOT2-229ENST00000551179 RMND1Q9NWS8 449 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 BARHL2Q9NY43 387 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 TMOD2Q9NZR1 351 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 MAD2L2Q9UI95 211 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 SERPINB13Q9UIV8 391 aa11.62□□□□□ -0.55
CNOT2-229ENST00000551179 ANKRD31Q8N7Z5 1873 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 VWA3AA6NCI4 1184 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 CCP110O43303 1012 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 TTLL1O95922 423 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 MCM7P33993 719 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.55
CNOT2-229ENST00000551179 HDLBPQ00341 1268 aaKnown RBP11.61□□□□□ -0.55
CNOT2-229ENST00000551179 NONOQ15233 471 aaKnown RBP eCLIP11.61□□□□□ -0.55
CNOT2-229ENST00000551179 ZNF174Q15697 407 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 GRIK5Q16478 980 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 DOK7Q18PE1 504 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 LCE2DQ5TA82 110 aaPredicted RBP11.61□□□□□ -0.55
CNOT2-229ENST00000551179 MSL1Q68DK7 614 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 SLC44A5Q8NCS7 719 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 ANKRD20A12PQ8NF67 263 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 GTPBP4Q9BZE4 634 aaKnown RBP11.61□□□□□ -0.55
CNOT2-229ENST00000551179 OSBPL5Q9H0X9 879 aaPredicted RBP11.61□□□□□ -0.55
CNOT2-229ENST00000551179 GLT8D2Q9H1C3 349 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 SERTAD1Q9UHV2 236 aa11.61□□□□□ -0.55
CNOT2-229ENST00000551179 PALM3A6NDB9 673 aaPredicted RBP11.6□□□□□ -0.55
CNOT2-229ENST00000551179 SMIM22K7EJ46 135 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 MPHOSPH10O00566 681 aaKnown RBP11.6□□□□□ -0.55
CNOT2-229ENST00000551179 SLFN14P0C7P3 912 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 CRKP46108 304 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 PTGDRQ13258 359 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 TPD52L1Q16890 204 aaPredicted RBP11.6□□□□□ -0.55
CNOT2-229ENST00000551179 CCDC96Q2M329 555 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 LONRF3Q496Y0 759 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 GPATCH4Q5T3I0 446 aaKnown RBP11.6□□□□□ -0.55
CNOT2-229ENST00000551179 STRIP1Q5VSL9 837 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 DTHD1Q6ZMT9 781 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 METTL16Q86W50 562 aaKnown RBP11.6□□□□□ -0.55
CNOT2-229ENST00000551179 HOMER1Q86YM7 354 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 PDILTQ8N807 584 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 SYMPKQ92797 1274 aaKnown RBP11.6□□□□□ -0.55
CNOT2-229ENST00000551179 ERCC4Q92889 916 aaPredicted RBP11.6□□□□□ -0.55
CNOT2-229ENST00000551179 GPKOWQ92917 476 aaPredicted RBP eCLIP11.6□□□□□ -0.556e-6■■□□□ 12
CNOT2-229ENST00000551179 CEP95Q96GE4 821 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 PRIMPOLQ96LW4 560 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 NAP1L4Q99733 375 aaKnown RBP11.6□□□□□ -0.55
CNOT2-229ENST00000551179 RAB34Q9BZG1 259 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 EHD4Q9H223 541 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 MAGEF1Q9HAY2 307 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 IL17RBQ9NRM6 502 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 R3HCC1Q9Y3T6 440 aaKnown RBP11.6□□□□□ -0.55
CNOT2-229ENST00000551179 PCDHA5Q9Y5H7 936 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 MYH1P12882 1939 aa11.6□□□□□ -0.55
CNOT2-229ENST00000551179 COL11A2P13942 1736 aaPredicted RBP11.6□□□□□ -0.55
CNOT2-229ENST00000551179 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
CNOT2-229ENST00000551179 FOCADQ5VW36 1801 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 ESYT2A0FGR8 921 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 STXBP3O00186 592 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 AP5Z1O43299 807 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 ECE2O60344 883 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 CDK11BP21127 795 aaKnown RBP11.59□□□□□ -0.55
CNOT2-229ENST00000551179 SFPQP23246 707 aaKnown RBP eCLIP11.59□□□□□ -0.55
CNOT2-229ENST00000551179 STAT6P42226 847 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 STIM1Q13586 685 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 TMEM266Q2M3C6 531 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 CFAP100Q494V2 611 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 SPECC1Q5M775 1068 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 WWC2Q6AWC2 1192 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 TMC6Q7Z403 805 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 ZSCAN29Q8IWY8 852 aaPredicted RBP11.59□□□□□ -0.55
CNOT2-229ENST00000551179 CCDC112Q8NEF3 446 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 TNFRSF25Q93038 417 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 ZNF830Q96NB3 372 aaPredicted RBP11.59□□□□□ -0.55
CNOT2-229ENST00000551179 GSDMAQ96QA5 445 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 MRIQ9BWK5 157 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 MAN1B1Q9UKM7 699 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 HDAC9Q9UKV0 1011 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 SYNRGQ9UMZ2 1314 aa11.59□□□□□ -0.55
CNOT2-229ENST00000551179 KIF2AO00139 706 aaPredicted RBP11.58□□□□□ -0.56
CNOT2-229ENST00000551179 ACTN4O43707 911 aaKnown RBP11.58□□□□□ -0.56
CNOT2-229ENST00000551179 MYL1P05976 194 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms