RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 OAZ1P54368 228 aa18.13■□□□□ 0.49
PRPF40B-211ENST00000551063 TRMT44Q8IYL2 757 aaKnown RBP18.13■□□□□ 0.49
PRPF40B-211ENST00000551063 CHURC1Q8WUH1 139 aa18.13■□□□□ 0.49
PRPF40B-211ENST00000551063 ANKS1AQ92625 1134 aa18.13■□□□□ 0.49
PRPF40B-211ENST00000551063 KIFC2Q96AC6 838 aa18.13■□□□□ 0.49
PRPF40B-211ENST00000551063 ZSCAN10Q96SZ4 725 aaPredicted RBP18.13■□□□□ 0.49
PRPF40B-211ENST00000551063 TEX13BQ9BXU2 312 aa18.13■□□□□ 0.49
PRPF40B-211ENST00000551063 SLC38A10Q9HBR0 1119 aa18.13■□□□□ 0.49
PRPF40B-211ENST00000551063 PCDH10Q9P2E7 1040 aa18.13■□□□□ 0.49
PRPF40B-211ENST00000551063 BIN2Q9UBW5 565 aaPredicted RBP18.13■□□□□ 0.49
PRPF40B-211ENST00000551063 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
PRPF40B-211ENST00000551063 STRNO43815 780 aa18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 INHAP05111 366 aa18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 HOXC6P09630 235 aa18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 CYP2B6P20813 491 aa18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 CCDC96Q2M329 555 aa18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 NCAPG2Q86XI2 1143 aa18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 ABRAQ8N0Z2 381 aa18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 UBAC1Q9BSL1 405 aa18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 ANO2Q9NQ90 1003 aa18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 ZSWIM5Q9P217 1185 aa18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 CTDP1Q9Y5B0 961 aaPredicted RBP18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 PARP14Q460N5 1801 aa18.12■□□□□ 0.49
PRPF40B-211ENST00000551063 SNHG28P0DPA3 235 aa18.11■□□□□ 0.49
PRPF40B-211ENST00000551063 PDHBP11177 359 aa18.11■□□□□ 0.49
PRPF40B-211ENST00000551063 IKQ13123 557 aaPredicted RBP18.11■□□□□ 0.49
PRPF40B-211ENST00000551063 KCTD1Q719H9 257 aa18.11■□□□□ 0.49
PRPF40B-211ENST00000551063 RALYLQ86SE5 291 aaKnown RBP18.11■□□□□ 0.49
PRPF40B-211ENST00000551063 ENAHQ8N8S7 591 aaPredicted RBP18.11■□□□□ 0.49
PRPF40B-211ENST00000551063 NCOA7Q8NI08 942 aa18.11■□□□□ 0.49
PRPF40B-211ENST00000551063 TRIB2Q92519 343 aa18.11■□□□□ 0.49
PRPF40B-211ENST00000551063 ZKSCAN3Q9BRR0 538 aa18.11■□□□□ 0.49
PRPF40B-211ENST00000551063 TNKSO95271 1327 aa18.11■□□□□ 0.49
PRPF40B-211ENST00000551063 CENPFP49454 3210 aa18.1■□□□□ 0.49
PRPF40B-211ENST00000551063 DOCK3Q8IZD9 2030 aa18.1■□□□□ 0.49
PRPF40B-211ENST00000551063 E7EWF7 191 aa18.1■□□□□ 0.49
PRPF40B-211ENST00000551063 ZKSCAN1P17029 563 aaPredicted RBP18.1■□□□□ 0.49
PRPF40B-211ENST00000551063 MTFR1Q15390 333 aa18.1■□□□□ 0.49
PRPF40B-211ENST00000551063 BTNL9Q6UXG8 535 aa18.1■□□□□ 0.49
PRPF40B-211ENST00000551063 RASGRP2Q7LDG7 609 aa18.1■□□□□ 0.49
PRPF40B-211ENST00000551063 KAT14Q9H8E8 782 aa18.1■□□□□ 0.49
PRPF40B-211ENST00000551063 MTMR7Q9Y216 660 aa18.1■□□□□ 0.49
PRPF40B-211ENST00000551063 CCL5P13501 91 aa18.09■□□□□ 0.49
PRPF40B-211ENST00000551063 ADORA2AP29274 412 aa18.09■□□□□ 0.49
PRPF40B-211ENST00000551063 SNRNP48Q6IEG0 339 aaKnown RBP18.09■□□□□ 0.49
PRPF40B-211ENST00000551063 STOX1Q6ZVD7 989 aa18.09■□□□□ 0.49
PRPF40B-211ENST00000551063 PNMA1Q8ND90 353 aa18.09■□□□□ 0.49
PRPF40B-211ENST00000551063 TAF6LQ9Y6J9 622 aa18.09■□□□□ 0.49
PRPF40B-211ENST00000551063 ZNF236Q9UL36 1845 aa18.09■□□□□ 0.49
PRPF40B-211ENST00000551063 GJB1P08034 283 aa18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 FCER1AP12319 257 aa18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 ZNF543Q08ER8 600 aa18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 KCTD2Q14681 263 aa18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 GPATCH4Q5T3I0 446 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 IFIT1BQ5T764 474 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 MAP3K21Q5TCX8 1036 aa18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 CYB5R4Q7L1T6 521 aa18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 CPXCR1Q8N123 301 aa18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 RNF208Q9H0X6 261 aa18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 RAVER2Q9HCJ3 691 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 SLC5A4Q9NY91 659 aa18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 PRR12Q9ULL5 1215 aa18.08■□□□□ 0.48
PRPF40B-211ENST00000551063 PLXNB2O15031 1838 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 SLC27A2O14975 620 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 CAPN2P17655 700 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 GJA8P48165 433 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 SART3Q15020 963 aaKnown RBP18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 NECTIN1Q15223 517 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 SEC23AQ15436 765 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 HABP4Q5JVS0 413 aaKnown RBP18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 SYDE2Q5VT97 1194 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 RNF20Q5VTR2 975 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 CREB3L3Q68CJ9 461 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 DPP9Q86TI2 863 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 MB21D2Q8IYB1 491 aaPredicted RBP18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 MMP19Q99542 508 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 UNC93B1Q9H1C4 597 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 PAK6Q9NQU5 681 aaPredicted RBP18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 FBXO40Q9UH90 709 aa18.07■□□□□ 0.48
PRPF40B-211ENST00000551063 FRMPD2Q68DX3 1309 aaPredicted RBP18.06■□□□□ 0.48
PRPF40B-211ENST00000551063 ERICH2A1L162 156 aa18.06■□□□□ 0.48
PRPF40B-211ENST00000551063 CCL14Q16627 93 aa18.06■□□□□ 0.48
PRPF40B-211ENST00000551063 TKFCQ3LXA3 575 aa18.06■□□□□ 0.48
PRPF40B-211ENST00000551063 OLFML2BQ68BL8 750 aa18.06■□□□□ 0.48
PRPF40B-211ENST00000551063 CHST13Q8NET6 341 aa18.06■□□□□ 0.48
PRPF40B-211ENST00000551063 CHMP4CQ96CF2 233 aa18.06■□□□□ 0.48
PRPF40B-211ENST00000551063 MTA3Q9BTC8 594 aa18.06■□□□□ 0.48
PRPF40B-211ENST00000551063 RANBP17Q9H2T7 1088 aaKnown RBP18.06■□□□□ 0.48
PRPF40B-211ENST00000551063 RIPK3Q9Y572 518 aa18.06■□□□□ 0.48
PRPF40B-211ENST00000551063 BRCA2P51587 3418 aa18.06■□□□□ 0.48
PRPF40B-211ENST00000551063 ZNF536O15090 1300 aa18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 RPTORQ8N122 1335 aa18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 IFIT3O14879 490 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 PRKAR2AP13861 404 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 TRIM32Q13049 653 aa18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 ASPRV1Q53RT3 343 aa18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 MFSD14CQ5VZR4 134 aa18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 TTBK2Q6IQ55 1244 aa18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 NPLOC4Q8TAT6 608 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms