RNA–Protein interactions for RNA: ENST00000550558.5

ASIC1-206, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 2

Gene ASIC1, Length 3,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-206ENST00000550558 TAF3Q5VWG9 929 aa18.93■□□□□ 0.62
ASIC1-206ENST00000550558 MAEAQ7L5Y9 396 aa18.93■□□□□ 0.62
ASIC1-206ENST00000550558 DNAJC5Q9H3Z4 198 aa18.93■□□□□ 0.62
ASIC1-206ENST00000550558 ZBTB21Q9ULJ3 1066 aa18.93■□□□□ 0.62
ASIC1-206ENST00000550558 CTAGE15A4D2H0 777 aa18.93■□□□□ 0.62
ASIC1-206ENST00000550558 CTAGE8P0CG41 777 aa18.93■□□□□ 0.62
ASIC1-206ENST00000550558 NOP2P46087 812 aaKnown RBP18.93■□□□□ 0.62
ASIC1-206ENST00000550558 CDK8P49336 464 aa18.93■□□□□ 0.62
ASIC1-206ENST00000550558 NBPF11Q86T75 865 aa18.93■□□□□ 0.62
ASIC1-206ENST00000550558 CTAGE6Q86UF2 777 aa18.93■□□□□ 0.62
ASIC1-206ENST00000550558 CTAGE4Q8IX94 777 aa18.93■□□□□ 0.62
ASIC1-206ENST00000550558 SAMM50Q9Y512 469 aa18.93■□□□□ 0.62
ASIC1-206ENST00000550558 CACNA1FO60840 1977 aa18.92■□□□□ 0.62
ASIC1-206ENST00000550558 CEP89Q96ST8 783 aa18.92■□□□□ 0.62
ASIC1-206ENST00000550558 PNPLA7Q6ZV29 1317 aa18.92■□□□□ 0.62
ASIC1-206ENST00000550558 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.92■□□□□ 0.62
ASIC1-206ENST00000550558 TMEM260Q9NX78 707 aa18.92■□□□□ 0.62
ASIC1-206ENST00000550558 SALL1Q9NSC2 1324 aa18.92■□□□□ 0.62
ASIC1-206ENST00000550558 B4DLN1 442 aa18.92■□□□□ 0.62
ASIC1-206ENST00000550558 SEPT12Q8IYM1 358 aa18.92■□□□□ 0.62
ASIC1-206ENST00000550558 LMAN1P49257 510 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 ADCY7P51828 1080 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 FNBP4Q8N3X1 1017 aaPredicted RBP18.91■□□□□ 0.62
ASIC1-206ENST00000550558 GOLGA1Q92805 767 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 PCDHA4Q9UN74 947 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 USP8P40818 1118 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 GRAPQ13588 217 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 FBXO38Q6PIJ6 1188 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 GRAPLQ8TC17 118 aaPredicted RBP18.91■□□□□ 0.62
ASIC1-206ENST00000550558 ENOX1Q8TC92 643 aaKnown RBP18.91■□□□□ 0.62
ASIC1-206ENST00000550558 GJA10Q969M2 543 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 CD209Q9NNX6 404 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 PARP3Q9Y6F1 533 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 USP17L5A8MUK1 530 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 OR52Z1P0C646 297 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 HERC4Q5GLZ8 1057 aaPredicted RBP18.91■□□□□ 0.62
ASIC1-206ENST00000550558 CEP95Q96GE4 821 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 BCL9O00512 1426 aa18.91■□□□□ 0.62
ASIC1-206ENST00000550558 RBM43Q6ZSC3 357 aaKnown RBP18.9■□□□□ 0.62
ASIC1-206ENST00000550558 WDR19Q8NEZ3 1342 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 TOPAZ1Q8N9V7 1692 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 GTPBP6O43824 516 aaPredicted RBP18.9■□□□□ 0.62
ASIC1-206ENST00000550558 COPB1P53618 953 aaKnown RBP18.9■□□□□ 0.62
ASIC1-206ENST00000550558 GPSM2P81274 684 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 CYP4A11Q02928 519 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 NEK8Q86SG6 692 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 GSDMAQ96QA5 445 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 MED1Q15648 1581 aaPredicted RBP18.9■□□□□ 0.62
ASIC1-206ENST00000550558 RIC1Q4ADV7 1423 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 USO1O60763 962 aaKnown RBP18.9■□□□□ 0.62
ASIC1-206ENST00000550558 GDF11O95390 407 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 APBA3O96018 575 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 CYLC1P35663 651 aaPredicted RBP18.9■□□□□ 0.62
ASIC1-206ENST00000550558 CHMP4BP1P59074 171 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 TROAPQ12815 778 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 DCAF17Q5H9S7 520 aaPredicted RBP18.9■□□□□ 0.62
ASIC1-206ENST00000550558 ZFYVE27Q5T4F4 411 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 TYW1BQ6NUM6 668 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 KRT25Q7Z3Z0 450 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 ZNF710Q8N1W2 664 aa18.9■□□□□ 0.62
ASIC1-206ENST00000550558 RGPD1P0DJD0 1748 aa18.89■□□□□ 0.62
ASIC1-206ENST00000550558 XRN1Q8IZH2 1706 aaKnown RBP18.89■□□□□ 0.62
ASIC1-206ENST00000550558 SPDYE3A6NKU9 549 aa18.89■□□□□ 0.62
ASIC1-206ENST00000550558 PLCG1P19174 1290 aa18.89■□□□□ 0.62
ASIC1-206ENST00000550558 ZNF512BQ96KM6 892 aaPredicted RBP18.89■□□□□ 0.62
ASIC1-206ENST00000550558 SPAG5Q96R06 1193 aa18.89■□□□□ 0.62
ASIC1-206ENST00000550558 RIOK1Q9BRS2 568 aaKnown RBP18.89■□□□□ 0.62
ASIC1-206ENST00000550558 OGFRQ9NZT2 677 aa18.89■□□□□ 0.62
ASIC1-206ENST00000550558 UBXN2AP68543 259 aa18.89■□□□□ 0.61
ASIC1-206ENST00000550558 KIF5AQ12840 1032 aa18.89■□□□□ 0.61
ASIC1-206ENST00000550558 NCAPH2Q6IBW4 605 aa18.89■□□□□ 0.61
ASIC1-206ENST00000550558 QTRT2Q9H974 415 aaKnown RBP18.89■□□□□ 0.61
ASIC1-206ENST00000550558 THRAP3Q9Y2W1 955 aaKnown RBP18.89■□□□□ 0.61
ASIC1-206ENST00000550558 MRPS25P82663 173 aaKnown RBP18.89■□□□□ 0.61
ASIC1-206ENST00000550558 CYP27A1Q02318 531 aa18.89■□□□□ 0.61
ASIC1-206ENST00000550558 SP4Q02446 784 aa18.89■□□□□ 0.61
ASIC1-206ENST00000550558 KRT31Q15323 416 aa18.89■□□□□ 0.61
ASIC1-206ENST00000550558 SF3B3Q15393 1217 aaKnown RBP18.89■□□□□ 0.61
ASIC1-206ENST00000550558 CUL5Q93034 780 aa18.89■□□□□ 0.61
ASIC1-206ENST00000550558 MAP3K14Q99558 947 aa18.89■□□□□ 0.61
ASIC1-206ENST00000550558 TMCO5BA8MYB1 307 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 MRPL12P52815 198 aaKnown RBP18.88■□□□□ 0.61
ASIC1-206ENST00000550558 SYCP1Q15431 976 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 FAM114A1Q8IWE2 563 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 ACBD3Q9H3P7 528 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 LEMD3Q9Y2U8 911 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 STK36Q9NRP7 1315 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 POTEMA6NI47 508 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 DDX39AO00148 427 aaKnown RBP18.88■□□□□ 0.61
ASIC1-206ENST00000550558 SLC35F6Q8N357 371 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 KANSL2Q9H9L4 492 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 ZMYND10O75800 440 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 PFKFB3Q16875 520 aaPredicted RBP18.88■□□□□ 0.61
ASIC1-206ENST00000550558 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
ASIC1-206ENST00000550558 C2CD5Q86YS7 1000 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 TRIML1Q8N9V2 468 aa18.88■□□□□ 0.61
ASIC1-206ENST00000550558 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.88■□□□□ 0.61
ASIC1-206ENST00000550558 PSDA5PKW4 1024 aaPredicted RBP18.87■□□□□ 0.61
ASIC1-206ENST00000550558 SLURP2P0DP57 97 aa18.87■□□□□ 0.61
ASIC1-206ENST00000550558 PRCPP42785 496 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms