RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 TSEN34Q9BSV6 310 aaKnown RBP20.56■□□□□ 0.88
HCFC2-205ENST00000550444 ARPP21Q9UBL0 812 aaPredicted RBP20.56■□□□□ 0.88
HCFC2-205ENST00000550444 RIPK3Q9Y572 518 aa20.56■□□□□ 0.88
HCFC2-205ENST00000550444 SMCHD1A6NHR9 2005 aa20.56■□□□□ 0.88
HCFC2-205ENST00000550444 ZBED9Q6R2W3 1325 aa20.55■□□□□ 0.88
HCFC2-205ENST00000550444 SYNRGQ9UMZ2 1314 aa20.55■□□□□ 0.88
HCFC2-205ENST00000550444 BAZ2AQ9UIF9 1905 aaKnown RBP20.55■□□□□ 0.88
HCFC2-205ENST00000550444 F5H6K3 240 aa20.55■□□□□ 0.88
HCFC2-205ENST00000550444 SNAI1O95863 264 aaPredicted RBP20.55■□□□□ 0.88
HCFC2-205ENST00000550444 KLRC3Q07444 240 aa20.55■□□□□ 0.88
HCFC2-205ENST00000550444 MIER1Q8N108 512 aa20.55■□□□□ 0.88
HCFC2-205ENST00000550444 VTI1AQ96AJ9 217 aa20.55■□□□□ 0.88
HCFC2-205ENST00000550444 CLIP2Q9UDT6 1046 aa20.55■□□□□ 0.88
HCFC2-205ENST00000550444 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.54■□□□□ 0.88
HCFC2-205ENST00000550444 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.54■□□□□ 0.88
HCFC2-205ENST00000550444 SMARCA5O60264 1052 aaPredicted RBP20.54■□□□□ 0.88
HCFC2-205ENST00000550444 ZBED4O75132 1171 aa20.54■□□□□ 0.88
HCFC2-205ENST00000550444 NDUFB10O96000 172 aa20.54■□□□□ 0.88
HCFC2-205ENST00000550444 RASA1P20936 1047 aa20.54■□□□□ 0.88
HCFC2-205ENST00000550444 ANKRD33Q7Z3H0 272 aa20.54■□□□□ 0.88
HCFC2-205ENST00000550444 MSL3Q8N5Y2 521 aaKnown RBP20.54■□□□□ 0.88
HCFC2-205ENST00000550444 KLHDC9Q8NEP7 349 aa20.54■□□□□ 0.88
HCFC2-205ENST00000550444 KIFC2Q96AC6 838 aa20.54■□□□□ 0.88
HCFC2-205ENST00000550444 STRBPQ96SI9 672 aaKnown RBP20.54■□□□□ 0.88
HCFC2-205ENST00000550444 ZNFX1Q9P2E3 1918 aaKnown RBP20.54■□□□□ 0.88
HCFC2-205ENST00000550444 LAMA2P24043 3122 aaKnown RBP20.54■□□□□ 0.88
HCFC2-205ENST00000550444 MYADML2A6NDP7 307 aa20.53■□□□□ 0.88
HCFC2-205ENST00000550444 MOXD2PA6NHM9 499 aa20.53■□□□□ 0.88
HCFC2-205ENST00000550444 IRX5P78411 483 aaPredicted RBP20.53■□□□□ 0.88
HCFC2-205ENST00000550444 GRIN2CQ14957 1233 aa20.53■□□□□ 0.88
HCFC2-205ENST00000550444 PRPF38AQ8NAV1 312 aaKnown RBP20.53■□□□□ 0.88
HCFC2-205ENST00000550444 TOX2Q96NM4 488 aa20.53■□□□□ 0.88
HCFC2-205ENST00000550444 LRRCC1Q9C099 1032 aa20.53■□□□□ 0.88
HCFC2-205ENST00000550444 RAVER2Q9HCJ3 691 aaKnown RBP20.53■□□□□ 0.88
HCFC2-205ENST00000550444 NYAP2Q9P242 653 aa20.53■□□□□ 0.88
HCFC2-205ENST00000550444 MYH8P13535 1937 aa20.53■□□□□ 0.88
HCFC2-205ENST00000550444 SYNGAP1Q96PV0 1343 aa20.53■□□□□ 0.88
HCFC2-205ENST00000550444 ROBO3Q96MS0 1386 aa20.52■□□□□ 0.88
HCFC2-205ENST00000550444 TMEM265A0A087WTH1 108 aa20.52■□□□□ 0.88
HCFC2-205ENST00000550444 C6orf222P0C671 652 aaPredicted RBP20.52■□□□□ 0.88
HCFC2-205ENST00000550444 DNAJB2P25686 324 aa20.52■□□□□ 0.88
HCFC2-205ENST00000550444 ACVR2BQ13705 512 aa20.52■□□□□ 0.88
HCFC2-205ENST00000550444 SBK1Q52WX2 424 aa20.52■□□□□ 0.88
HCFC2-205ENST00000550444 ANKRD35Q8N283 1001 aa20.52■□□□□ 0.88
HCFC2-205ENST00000550444 GLT1D1Q96MS3 346 aa20.52■□□□□ 0.88
HCFC2-205ENST00000550444 COL11A1P12107 1806 aaPredicted RBP20.51■□□□□ 0.87
HCFC2-205ENST00000550444 DNAJC25-GNG10A0A024R161 153 aa20.51■□□□□ 0.87
HCFC2-205ENST00000550444 GSG1L2A8MUP6 293 aa20.51■□□□□ 0.87
HCFC2-205ENST00000550444 DUSP11O75319 330 aaKnown RBP20.51■□□□□ 0.87
HCFC2-205ENST00000550444 TIMP1P01033 207 aa20.51■□□□□ 0.87
HCFC2-205ENST00000550444 CCSAPQ6IQ19 270 aaPredicted RBP20.51■□□□□ 0.87
HCFC2-205ENST00000550444 MAMDC4Q6UXC1 1216 aa20.51■□□□□ 0.87
HCFC2-205ENST00000550444 ZNF444Q8N0Y2 327 aaPredicted RBP20.51■□□□□ 0.87
HCFC2-205ENST00000550444 PIAS4Q8N2W9 510 aaPredicted RBP20.51■□□□□ 0.87
HCFC2-205ENST00000550444 CHMP4BQ9H444 224 aaKnown RBP20.51■□□□□ 0.87
HCFC2-205ENST00000550444 SPC25Q9HBM1 224 aa20.51■□□□□ 0.87
HCFC2-205ENST00000550444 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.51■□□□□ 0.87
HCFC2-205ENST00000550444 PRDM1O75626 825 aa20.5■□□□□ 0.87
HCFC2-205ENST00000550444 ASGR1P07306 291 aa20.5■□□□□ 0.87
HCFC2-205ENST00000550444 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.5■□□□□ 0.87
HCFC2-205ENST00000550444 ISY1Q9ULR0 285 aaKnown RBP20.5■□□□□ 0.87
HCFC2-205ENST00000550444 PARP14Q460N5 1801 aa20.5■□□□□ 0.87
HCFC2-205ENST00000550444 APPP05067 770 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 TDO2P48775 406 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 CCDC144BQ3MJ40 725 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 GNASQ5JWF2 1037 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 GIMAP6Q6P9H5 292 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 CCDC129Q6ZRS4 1044 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 ZNF467Q7Z7K2 595 aaPredicted RBP20.49■□□□□ 0.87
HCFC2-205ENST00000550444 PCSK9Q8NBP7 692 aaKnown RBP20.49■□□□□ 0.87
HCFC2-205ENST00000550444 OSBP2Q969R2 916 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 TIFAQ96CG3 184 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 ZNF576Q9H609 170 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 ECHDC1Q9NTX5 307 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 FEM1BQ9UK73 627 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 TBX21Q9UL17 535 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 ELP1O95163 1332 aa20.49■□□□□ 0.87
HCFC2-205ENST00000550444 ATP2A1O14983 1001 aa20.48■□□□□ 0.87
HCFC2-205ENST00000550444 ADCY6O43306 1168 aa20.48■□□□□ 0.87
HCFC2-205ENST00000550444 PPIGQ13427 754 aaKnown RBP eCLIP20.48■□□□□ 0.87
HCFC2-205ENST00000550444 MFSD5Q6N075 450 aa20.48■□□□□ 0.87
HCFC2-205ENST00000550444 LRRC47Q8N1G4 583 aaKnown RBP20.48■□□□□ 0.87
HCFC2-205ENST00000550444 SYMPKQ92797 1274 aaKnown RBP20.48■□□□□ 0.87
HCFC2-205ENST00000550444 PPP1R12CQ9BZL4 782 aa20.48■□□□□ 0.87
HCFC2-205ENST00000550444 ABHD16BQ9H3Z7 469 aa20.48■□□□□ 0.87
HCFC2-205ENST00000550444 SLC38A10Q9HBR0 1119 aa20.48■□□□□ 0.87
HCFC2-205ENST00000550444 HOMER2Q9NSB8 354 aa20.48■□□□□ 0.87
HCFC2-205ENST00000550444 MROH7Q68CQ1 1323 aa20.48■□□□□ 0.87
HCFC2-205ENST00000550444 PLXNA1Q9UIW2 1896 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 ARVCFO00192 962 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 CST5P28325 142 aaPredicted RBP20.47■□□□□ 0.87
HCFC2-205ENST00000550444 CDK7P50613 346 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 CCDC174Q6PII3 467 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 NOL8Q76FK4 1167 aaKnown RBP20.47■□□□□ 0.87
HCFC2-205ENST00000550444 ARMCX2Q7L311 632 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 KBTBD3Q8NAB2 608 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 USP38Q8NB14 1042 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 PPM1EQ8WY54 764 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 APPBP2Q92624 585 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 CHMP4CQ96CF2 233 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms