RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 MAGEC2Q9UBF1 373 aaPredicted RBP7.84□□□□□ -1.15
HCFC2-204ENST00000550335 GPR55Q9Y2T6 319 aaPredicted RBP7.84□□□□□ -1.15
HCFC2-204ENST00000550335 DNAJC25-GNG10A0A024R161 153 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 WFS1O76024 890 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 CYP7A1P22680 504 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 STRN3Q13033 797 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 MAP7Q14244 749 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 PRSS53Q2L4Q9 553 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 BRDTQ58F21 947 aaPredicted RBP7.83□□□□□ -1.16
HCFC2-204ENST00000550335 USP53Q70EK8 1073 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 BRAPQ7Z569 592 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 RNF180Q86T96 592 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 VWCEQ96DN2 955 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 ASPNQ9BXN1 380 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 ASCC2Q9H1I8 757 aaPredicted RBP7.83□□□□□ -1.16
HCFC2-204ENST00000550335 MINPP1Q9UNW1 487 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 MAPRE3Q9UPY8 281 aa7.83□□□□□ -1.16
HCFC2-204ENST00000550335 DIS3Q9Y2L1 958 aaKnown RBP7.83□□□□□ -1.16
HCFC2-204ENST00000550335 TNPO3Q9Y5L0 923 aaKnown RBP7.83□□□□□ -1.16
HCFC2-204ENST00000550335 GSG1L2A8MUP6 293 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 APPP05067 770 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 BMP3P12645 472 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 AMPD2Q01433 879 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 PODNQ7Z5L7 613 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 TMC3Q7Z5M5 1100 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 STRA8Q7Z7C7 330 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 FMNL3Q8IVF7 1028 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 AHI1Q8N157 1196 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 DDX1Q92499 740 aaKnown RBP7.82□□□□□ -1.16
HCFC2-204ENST00000550335 FBXL18Q96ME1 805 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 UBL7Q96S82 380 aaPredicted RBP7.82□□□□□ -1.16
HCFC2-204ENST00000550335 NOP53Q9NZM5 478 aaKnown RBP7.82□□□□□ -1.16
HCFC2-204ENST00000550335 SF3B6Q9Y3B4 125 aaKnown RBP7.82□□□□□ -1.16
HCFC2-204ENST00000550335 TRAF6Q9Y4K3 522 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 FHOD1Q9Y613 1164 aa7.82□□□□□ -1.16
HCFC2-204ENST00000550335 A0A087WZG4 1122 aa7.81□□□□□ -1.16
HCFC2-204ENST00000550335 KPNA6O60684 536 aa7.81□□□□□ -1.16
HCFC2-204ENST00000550335 DNAJC8O75937 253 aaPredicted RBP7.81□□□□□ -1.16
HCFC2-204ENST00000550335 APBA3O96018 575 aa7.81□□□□□ -1.16
HCFC2-204ENST00000550335 CPEP16870 476 aa7.81□□□□□ -1.16
HCFC2-204ENST00000550335 POU3F3P20264 500 aaPredicted RBP7.81□□□□□ -1.16
HCFC2-204ENST00000550335 HOXC12P31275 282 aa7.81□□□□□ -1.16
HCFC2-204ENST00000550335 GABREP78334 506 aa7.81□□□□□ -1.16
HCFC2-204ENST00000550335 PCBP1Q15365 356 aaKnown RBP eCLIP7.81□□□□□ -1.16
HCFC2-204ENST00000550335 FGD2Q7Z6J4 655 aa7.81□□□□□ -1.16
HCFC2-204ENST00000550335 TMEM145Q8NBT3 493 aa7.81□□□□□ -1.16
HCFC2-204ENST00000550335 SYTL5Q8TDW5 730 aaPredicted RBP7.81□□□□□ -1.16
HCFC2-204ENST00000550335 UTP4Q969X6 686 aaKnown RBP7.81□□□□□ -1.16
HCFC2-204ENST00000550335 MAGEB10Q96LZ2 347 aaPredicted RBP7.81□□□□□ -1.16
HCFC2-204ENST00000550335 CHMP4AQ9BY43 222 aa7.81□□□□□ -1.16
HCFC2-204ENST00000550335 TYW1Q9NV66 732 aaKnown RBP7.81□□□□□ -1.16
HCFC2-204ENST00000550335 NISCHQ9Y2I1 1504 aa7.81□□□□□ -1.16
HCFC2-204ENST00000550335 CNTNAP5Q8WYK1 1306 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 FAM95CA0A1B0GW59 222 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 KCNQ2O43526 872 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 EFCAB14O75071 495 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 LEFTY1O75610 366 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 C6orf222P0C671 652 aaPredicted RBP7.8□□□□□ -1.16
HCFC2-204ENST00000550335 MAP4P27816 1152 aaKnown RBP7.8□□□□□ -1.16
HCFC2-204ENST00000550335 GUCY2FP51841 1108 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 GFRA1P56159 465 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 ZNF460Q14592 562 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 HSP90AB2PQ58FF8 381 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 LCE2CQ5TA81 110 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 PPM1KQ8N3J5 372 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 WFDC12Q8WWY7 111 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 PTPRN2Q92932 1015 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 NKX2-4Q9H2Z4 354 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 CHST7Q9NS84 486 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 INTS7Q9NVH2 962 aaKnown RBP7.8□□□□□ -1.16
HCFC2-204ENST00000550335 TCEAL9Q9UHQ7 104 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 KCNH3Q9ULD8 1083 aa7.8□□□□□ -1.16
HCFC2-204ENST00000550335 COL17A1Q9UMD9 1497 aaPredicted RBP7.8□□□□□ -1.16
HCFC2-204ENST00000550335 CNTNAP4Q9C0A0 1308 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 ALG1L2C9J202 215 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 JMJD7P0C870 316 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 ITIH2P19823 946 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 NOS3P29474 1203 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 FLT3P36888 993 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 CLEC16AQ2KHT3 1053 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 CFAP100Q494V2 611 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 CWF19L1Q69YN2 538 aaKnown RBP7.79□□□□□ -1.16
HCFC2-204ENST00000550335 GIMAP7Q8NHV1 300 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 LENG1Q96BZ8 264 aaPredicted RBP7.79□□□□□ -1.16
HCFC2-204ENST00000550335 CCDC140Q96MF4 163 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 TRIM39Q9HCM9 518 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 PCDHA9Q9Y5H5 950 aa7.79□□□□□ -1.16
HCFC2-204ENST00000550335 ARID4BQ4LE39 1312 aaPredicted RBP7.78□□□□□ -1.16
HCFC2-204ENST00000550335 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.78□□□□□ -1.16
HCFC2-204ENST00000550335 C9orf172C9J069 976 aa7.78□□□□□ -1.16
HCFC2-204ENST00000550335 H0Y8X5 98 aa7.78□□□□□ -1.16
HCFC2-204ENST00000550335 RASGRP1O95267 797 aa7.78□□□□□ -1.16
HCFC2-204ENST00000550335 PRAMEF1O95521 474 aa7.78□□□□□ -1.16
HCFC2-204ENST00000550335 EOMESO95936 686 aa7.78□□□□□ -1.16
HCFC2-204ENST00000550335 CD3EP07766 207 aa7.78□□□□□ -1.16
HCFC2-204ENST00000550335 FAM87AP0C7U9 286 aa7.78□□□□□ -1.16
HCFC2-204ENST00000550335 EXOSC10Q01780 885 aaKnown RBP7.78□□□□□ -1.16
HCFC2-204ENST00000550335 SCRN1Q12765 414 aa7.78□□□□□ -1.16
HCFC2-204ENST00000550335 NTRK3Q16288 839 aa7.78□□□□□ -1.16
HCFC2-204ENST00000550335 SFRP5Q5T4F7 317 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms