RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TRIM32Q13049 653 aa20.31■□□□□ 0.84
CHMP1A-208ENST00000550102 IKQ13123 557 aaPredicted RBP20.31■□□□□ 0.84
CHMP1A-208ENST00000550102 CCL14Q16627 93 aa20.31■□□□□ 0.84
CHMP1A-208ENST00000550102 FAM160B2Q86V87 743 aa20.31■□□□□ 0.84
CHMP1A-208ENST00000550102 U2AF1L4Q8WU68 220 aaKnown RBP20.31■□□□□ 0.84
CHMP1A-208ENST00000550102 CNNM2Q9H8M5 875 aa20.31■□□□□ 0.84
CHMP1A-208ENST00000550102 HMX1Q9NP08 348 aaPredicted RBP20.31■□□□□ 0.84
CHMP1A-208ENST00000550102 RPTORQ8N122 1335 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 TMEM232C9JQI7 657 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 ZBED4O75132 1171 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 FCER1AP12319 257 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 MCCP23508 829 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 CCDC96Q2M329 555 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 MAP3K21Q5TCX8 1036 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 SNRNP48Q6IEG0 339 aaKnown RBP20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 DPP9Q86TI2 863 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 CHURC1Q8WUH1 139 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 DCAF4Q8WV16 495 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 DEFB118Q96PH6 123 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 SLC38A10Q9HBR0 1119 aa20.3■□□□□ 0.84
CHMP1A-208ENST00000550102 ATP2A1O14983 1001 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 KDM4AO75164 1064 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 FDX1P10109 184 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 BMP2KLQ5H9B9 411 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 MFSD14CQ5VZR4 134 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 RASGRP2Q7LDG7 609 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 IQCA1Q86XH1 822 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 CHMP4CQ96CF2 233 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 TMEM47Q9BQJ4 181 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 KRT23Q9C075 422 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 SLC5A4Q9NY91 659 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 MTMR7Q9Y216 660 aa20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 U3KPZ7 1027 aaPredicted RBP20.29■□□□□ 0.84
CHMP1A-208ENST00000550102 MYH6P13533 1939 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 B4E1Z4 1266 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 PLA2G6O60733 806 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 SGPL1O95470 568 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 CAPN2P17655 700 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 OAZ1P54368 228 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 KCTD2Q14681 263 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 CCDC178Q5BJE1 867 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 RCSD1Q6JBY9 416 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 KCTD1Q719H9 257 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 TTC14Q96N46 770 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 MMP19Q99542 508 aa20.28■□□□□ 0.84
CHMP1A-208ENST00000550102 PTH1RQ03431 593 aa20.27■□□□□ 0.84
CHMP1A-208ENST00000550102 CACNB2Q08289 660 aaPredicted RBP20.27■□□□□ 0.84
CHMP1A-208ENST00000550102 SKAP1Q86WV1 359 aa20.27■□□□□ 0.84
CHMP1A-208ENST00000550102 CPXCR1Q8N123 301 aa20.27■□□□□ 0.84
CHMP1A-208ENST00000550102 NPLOC4Q8TAT6 608 aa20.27■□□□□ 0.84
CHMP1A-208ENST00000550102 FLRT1Q9NZU1 646 aa20.27■□□□□ 0.84
CHMP1A-208ENST00000550102 FARP2O94887 1054 aaPredicted RBP20.26■□□□□ 0.83
CHMP1A-208ENST00000550102 OLFML2BQ68BL8 750 aa20.26■□□□□ 0.83
CHMP1A-208ENST00000550102 ZKSCAN3Q9BRR0 538 aa20.26■□□□□ 0.83
CHMP1A-208ENST00000550102 RAVER2Q9HCJ3 691 aaKnown RBP20.26■□□□□ 0.83
CHMP1A-208ENST00000550102 MCM3APO60318 1980 aa20.26■□□□□ 0.83
CHMP1A-208ENST00000550102 CEP290O15078 2479 aa20.26■□□□□ 0.83
CHMP1A-208ENST00000550102 COBLO75128 1261 aa20.25■□□□□ 0.83
CHMP1A-208ENST00000550102 TFRCP02786 760 aaKnown RBP20.25■□□□□ 0.83
CHMP1A-208ENST00000550102 DGKHQ86XP1 1220 aa20.25■□□□□ 0.83
CHMP1A-208ENST00000550102 UBAC1Q9BSL1 405 aa20.25■□□□□ 0.83
CHMP1A-208ENST00000550102 CRISPLD2Q9H0B8 497 aa20.25■□□□□ 0.83
CHMP1A-208ENST00000550102 TNKSO95271 1327 aa20.25■□□□□ 0.83
CHMP1A-208ENST00000550102 CENPBP07199 599 aaPredicted RBP20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 PDHBP11177 359 aa20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 SLC4A3P48751 1232 aa20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 TRDNQ13061 729 aa20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 KIAA1211Q6ZU35 1233 aa20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 ZSCAN10Q96SZ4 725 aaPredicted RBP20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 ESYT1Q9BSJ8 1104 aa20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 FBXO40Q9UH90 709 aa20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 PRR12Q9ULL5 1215 aa20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 RIPK3Q9Y572 518 aa20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 FRMPD2Q68DX3 1309 aaPredicted RBP20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 SMCHD1A6NHR9 2005 aa20.24■□□□□ 0.83
CHMP1A-208ENST00000550102 ALPK3Q96L96 1907 aa20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 CYP21A2P08686 494 aa20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 CCND3P30281 292 aaPredicted RBP20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 CYP2C19P33261 490 aa20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 PRPF38BQ5VTL8 546 aaKnown RBP20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 UBE2Q1Q7Z7E8 422 aa20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 ENAHQ8N8S7 591 aaPredicted RBP20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 CHST13Q8NET6 341 aa20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 MAML3Q96JK9 1138 aa20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 KAT14Q9H8E8 782 aa20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 ZSWIM5Q9P217 1185 aa20.23■□□□□ 0.83
CHMP1A-208ENST00000550102 LCTP09848 1927 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 IGHA2P01877 340 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 PGK2P07205 417 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 SNHG28P0DPA3 235 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 ZNF543Q08ER8 600 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 SYDE2Q5VT97 1194 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 BTNL9Q6UXG8 535 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 RALYLQ86SE5 291 aaKnown RBP20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 ANKLE1Q8NAG6 615 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 PNMA1Q8ND90 353 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 MAP4K1Q92918 833 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 GPCPD1Q9NPB8 672 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 HOMER2Q9NSB8 354 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms