RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 DNAJC25Q9H1X3 360 aa4.41□□□□□ -1.7
RAB5B-207ENST00000549915 ZSCAN16Q9H4T2 348 aaPredicted RBP4.41□□□□□ -1.7
RAB5B-207ENST00000549915 SOX17Q9H6I2 414 aaPredicted RBP4.41□□□□□ -1.7
RAB5B-207ENST00000549915 TPSG1Q9NRR2 321 aa4.41□□□□□ -1.7
RAB5B-207ENST00000549915 DZANK1Q9NVP4 752 aa4.41□□□□□ -1.7
RAB5B-207ENST00000549915 HYPKQ9NX55 129 aa4.41□□□□□ -1.7
RAB5B-207ENST00000549915 CWC15Q9P013 229 aaKnown RBP4.41□□□□□ -1.7
RAB5B-207ENST00000549915 HMG20BQ9P0W2 317 aa4.41□□□□□ -1.7
RAB5B-207ENST00000549915 ZNF215Q9UL58 517 aaPredicted RBP4.41□□□□□ -1.7
RAB5B-207ENST00000549915 HDAC5Q9UQL6 1122 aa4.41□□□□□ -1.7
RAB5B-207ENST00000549915 GNEQ9Y223 722 aaKnown RBP4.41□□□□□ -1.7
RAB5B-207ENST00000549915 EXOC6BQ9Y2D4 811 aa4.41□□□□□ -1.7
RAB5B-207ENST00000549915 PHLPP2Q6ZVD8 1323 aa4.41□□□□□ -1.7
RAB5B-207ENST00000549915 KDRP35968 1356 aa4.4□□□□□ -1.7
RAB5B-207ENST00000549915 RFX7Q2KHR2 1363 aa4.4□□□□□ -1.7
RAB5B-207ENST00000549915 USP31Q70CQ4 1352 aa4.4□□□□□ -1.7
RAB5B-207ENST00000549915 JCADQ9P266 1359 aa4.4□□□□□ -1.7
RAB5B-207ENST00000549915 MED1Q15648 1581 aaPredicted RBP4.4□□□□□ -1.7
RAB5B-207ENST00000549915 VPS37CA5D8V6 355 aaPredicted RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 FSCN2O14926 492 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 MYO1BO43795 1136 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 DEAF1O75398 565 aaPredicted RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 UBTFL1P0CB47 393 aaPredicted RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 SKILP12757 684 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 CASTP20810 708 aaKnown RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 CCZ1BP86790 482 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 CCZ1P86791 482 aaPredicted RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 LRMPQ12912 555 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 MTMR3Q13615 1198 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 KRT32Q14532 448 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 SETDB1Q15047 1291 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 IQCB1Q15051 598 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 RSPO4Q2I0M5 234 aaPredicted RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 KRT24Q2M2I5 525 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 TAF7LQ5H9L4 462 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 NKAPLQ5M9Q1 402 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 LARP1BQ659C4 914 aaKnown RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 SHISA2Q6UWI4 295 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 Q6ZS46 218 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 LUZP1Q86V48 1076 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 ERC1Q8IUD2 1116 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 CCDC83Q8IWF9 413 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 CEP57L1Q8IYX8 460 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 CCAR2Q8N163 923 aaKnown RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 MSL3Q8N5Y2 521 aaKnown RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 LEO1Q8WVC0 666 aaPredicted RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 TP53INP1Q96A56 240 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 SPATA32Q96LK8 384 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 BPIFA3Q9BQP9 254 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 BHLHE41Q9C0J9 482 aaPredicted RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 LACRTQ9GZZ8 138 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 NAT10Q9H0A0 1025 aaKnown RBP4.4□□□□□ -1.71
RAB5B-207ENST00000549915 SEMA6BQ9H3T3 888 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 YY1AP1Q9H869 796 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 PDRG1Q9NUG6 133 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 ANO10Q9NW15 660 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 DACT1Q9NYF0 836 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 PSD3Q9NYI0 1048 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 KANSL3Q9P2N6 904 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 CFAP45Q9UL16 551 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 TOPAZ1Q8N9V7 1692 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 FMN2Q9NZ56 1722 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 SBNO1A3KN83 1393 aa4.4□□□□□ -1.71
RAB5B-207ENST00000549915 MYO5BQ9ULV0 1848 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 GOLGA6L9A6NEM1 432 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 CCDC69A6NI79 296 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 BECN2A8MW95 431 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 F8W735 103 aaPredicted RBP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 DYRK3O43781 588 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 ZRANB2O95218 330 aaKnown RBP eCLIP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 HOXB7P09629 217 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 PNMA6AP0CW24 399 aaPredicted RBP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 LIG1P18858 919 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 TUBB4BP68371 445 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 KCNA1Q09470 495 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 MTX1Q13505 466 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 SNW1Q13573 536 aaKnown RBP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 IDI1Q13907 227 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 SAFB2Q14151 953 aaKnown RBP eCLIP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 EIF4A2Q14240 407 aaKnown RBP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 ELF2Q15723 593 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 FOXD4L6Q3SYB3 417 aaPredicted RBP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 CCDC93Q567U6 631 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 CCDC158Q5M9N0 1113 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 COL13A1Q5TAT6 717 aaPredicted RBP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 JAKMIP3Q5VZ66 844 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 ANKRD34AQ69YU3 496 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 GGT6Q6P531 493 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 SLC4A10Q6U841 1118 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 TMCO3Q6UWJ1 677 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 FOXD4L3Q6VB84 417 aaPredicted RBP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 CCDC73Q6ZRK6 1079 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 TICAM2Q86XR7 235 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 IQUBQ8NA54 791 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 BICD2Q8TD16 824 aa4.39□□□□□ -1.71
RAB5B-207ENST00000549915 ALKBH8Q96BT7 664 aaKnown RBP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 JAKMIP1Q96N16 626 aaKnown RBP4.39□□□□□ -1.71
RAB5B-207ENST00000549915 POP1Q99575 1024 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms