RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 WASHC2AQ641Q2 1341 aa6.91□□□□□ -1.3
SMARCC2-207ENST00000549757 NCAPD2Q15021 1401 aa6.91□□□□□ -1.3
SMARCC2-207ENST00000549757 C10orf71Q711Q0 1435 aa6.91□□□□□ -1.3
SMARCC2-207ENST00000549757 GOLGB1Q14789 3259 aaKnown RBP6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 C9orf172C9J069 976 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 DLL1O00548 723 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 TM4SF5O14894 197 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 PPP1R12AO14974 1030 aaPredicted RBP6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 SMNDC1O75940 238 aaKnown RBP eCLIP6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 TOMM70O94826 608 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 GATA4P43694 442 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 GJA8P48165 433 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 CABP4P57796 275 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 EIF4A2Q14240 407 aaKnown RBP6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 C1orf141Q5JVX7 400 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 C11orf96Q7Z7L8 435 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 CITED4Q96RK1 184 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 FAM129BQ96TA1 746 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.9□□□□□ -1.38e-7■■□□□ 13.1
SMARCC2-207ENST00000549757 SRA1Q9HD15 236 aaKnown RBP6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 GNL3LQ9NVN8 582 aaKnown RBP6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 DZANK1Q9NVP4 752 aa6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 TTF2Q9UNY4 1162 aaKnown RBP6.9□□□□□ -1.3
SMARCC2-207ENST00000549757 C4AP0C0L4 1744 aa6.9□□□□□ -1.31
SMARCC2-207ENST00000549757 NDUFB5O43674 189 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 PHACTR2O75167 634 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 DPEP1P16444 411 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 ATF4P18848 351 aaPredicted RBP6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 PLCB3Q01970 1234 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 MBTPS1Q14703 1052 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 PLEKHO1Q53GL0 409 aaPredicted RBP6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 ODR4Q5SWX8 454 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 ZNF530Q6P9A1 599 aaPredicted RBP6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 CKAP2LQ8IYA6 745 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 HHIPQ96QV1 700 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 LACRTQ9GZZ8 138 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 NMRK2Q9NPI5 230 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 BSDC1Q9NW68 430 aaPredicted RBP6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 POLKQ9UBT6 870 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 RPS6KL1Q9Y6S9 549 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 CNTNAP4Q9C0A0 1308 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 KDRP35968 1356 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 PLEKHG2Q9H7P9 1386 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 KIF13BQ9NQT8 1826 aa6.89□□□□□ -1.31
SMARCC2-207ENST00000549757 COL5A3P25940 1745 aaPredicted RBP6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 KIAA1551Q9HCM1 1747 aa6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 KDM2BQ8NHM5 1336 aa6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 ERVV-2B6SEH9 535 aa6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 RPS6KA4O75676 772 aa6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 TRPA1O75762 1119 aa6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 VIL1P09327 827 aaKnown RBP6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 GYS1P13807 737 aa6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 PEAR1Q5VY43 1037 aaPredicted RBP6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 USP48Q86UV5 1035 aa6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 IER2Q9BTL4 223 aa6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 ADAM19Q9H013 955 aa6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 ZFYVE28Q9HCC9 887 aa6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 RNF181Q9P0P0 153 aa6.88□□□□□ -1.31
SMARCC2-207ENST00000549757 EPHA1P21709 976 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 CDC27P30260 824 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 CRKLP46109 303 aaKnown RBP6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 MTHFSP49914 203 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 NRG1Q02297 640 aaPredicted RBP6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 PTPN12Q05209 780 aaKnown RBP6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 UBE4AQ14139 1066 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 AMOTQ4VCS5 1084 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 DALRD3Q5D0E6 543 aaKnown RBP6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 CCSAPQ6IQ19 270 aaPredicted RBP6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 IGF2-ASQ6U949 168 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 TMEM102Q8N9M5 508 aaPredicted RBP6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 RELTQ969Z4 430 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 CRELD1Q96HD1 420 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 DMRTB1Q96MA1 342 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 SETDB2Q96T68 719 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 MUC3BQ9H195 1237 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 PIM2Q9P1W9 311 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 SRP68Q9UHB9 627 aaKnown RBP6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 WDR90Q96KV7 1748 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 ZNF831Q5JPB2 1677 aa6.87□□□□□ -1.31
SMARCC2-207ENST00000549757 KCPQ6ZWJ8 1503 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 KDM6AO15550 1401 aaPredicted RBP6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 LINC01387J3KSC0 135 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 ADAM23O75077 832 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 CTSHP09668 335 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 ATP2B2Q01814 1243 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 DOC2BQ14184 412 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 KRBA2Q6ZNG9 492 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 TXNRD3Q86VQ6 643 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 MAP4K3Q8IVH8 894 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 GALNT11Q8NCW6 608 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 SCYL1Q96KG9 808 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 NAP1L5Q96NT1 182 aaPredicted RBP6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 OSMRQ99650 979 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 ZKSCAN3Q9BRR0 538 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 SH2B1Q9NRF2 756 aaPredicted RBP6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 LATS2Q9NRM7 1088 aa6.86□□□□□ -1.31
SMARCC2-207ENST00000549757 TPSG1Q9NRR2 321 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms