RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 COLQQ9Y215 455 aaPredicted RBP22.1■■□□□ 1.13
CHMP1A-207ENST00000549328 DIS3Q9Y2L1 958 aaKnown RBP22.1■■□□□ 1.13
CHMP1A-207ENST00000549328 CCDC171Q6TFL3 1326 aa22.09■■□□□ 1.13
CHMP1A-207ENST00000549328 FDX1P10109 184 aa22.09■■□□□ 1.13
CHMP1A-207ENST00000549328 CNGA1P29973 690 aa22.09■■□□□ 1.13
CHMP1A-207ENST00000549328 GMCL1Q96IK5 515 aa22.09■■□□□ 1.13
CHMP1A-207ENST00000549328 IL17RBQ9NRM6 502 aa22.09■■□□□ 1.13
CHMP1A-207ENST00000549328 ZNFX1Q9P2E3 1918 aaKnown RBP22.08■■□□□ 1.13
CHMP1A-207ENST00000549328 RANBP6O60518 1105 aaKnown RBP22.08■■□□□ 1.13
CHMP1A-207ENST00000549328 COL6A1P12109 1028 aa22.08■■□□□ 1.13
CHMP1A-207ENST00000549328 NOVP48745 357 aa22.08■■□□□ 1.13
CHMP1A-207ENST00000549328 SNRNP48Q6IEG0 339 aaKnown RBP22.08■■□□□ 1.13
CHMP1A-207ENST00000549328 TRPV1Q8NER1 839 aa22.08■■□□□ 1.13
CHMP1A-207ENST00000549328 KIFC2Q96AC6 838 aa22.08■■□□□ 1.13
CHMP1A-207ENST00000549328 SLC38A10Q9HBR0 1119 aa22.08■■□□□ 1.13
CHMP1A-207ENST00000549328 STX8Q9UNK0 236 aa22.08■■□□□ 1.13
CHMP1A-207ENST00000549328 CTDP1Q9Y5B0 961 aaPredicted RBP22.08■■□□□ 1.13
CHMP1A-207ENST00000549328 TACC3Q9Y6A5 838 aa22.08■■□□□ 1.13
CHMP1A-207ENST00000549328 HIP1O00291 1037 aa22.07■■□□□ 1.12
CHMP1A-207ENST00000549328 PCP11498 1178 aaKnown RBP22.07■■□□□ 1.12
CHMP1A-207ENST00000549328 OAZ1P54368 228 aa22.07■■□□□ 1.12
CHMP1A-207ENST00000549328 ZNF792Q3KQV3 632 aa22.07■■□□□ 1.12
CHMP1A-207ENST00000549328 CHURC1Q8WUH1 139 aa22.07■■□□□ 1.12
CHMP1A-207ENST00000549328 NRBP1Q9UHY1 535 aa22.07■■□□□ 1.12
CHMP1A-207ENST00000549328 SEPT4O43236 478 aa22.06■■□□□ 1.12
CHMP1A-207ENST00000549328 PLA2G6O60733 806 aa22.06■■□□□ 1.12
CHMP1A-207ENST00000549328 SLC1A4P43007 532 aa22.06■■□□□ 1.12
CHMP1A-207ENST00000549328 STAT2P52630 851 aa22.06■■□□□ 1.12
CHMP1A-207ENST00000549328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.06■■□□□ 1.12
CHMP1A-207ENST00000549328 FAM160B2Q86V87 743 aa22.06■■□□□ 1.12
CHMP1A-207ENST00000549328 PFASO15067 1338 aa22.06■■□□□ 1.12
CHMP1A-207ENST00000549328 TMEM232C9JQI7 657 aa22.05■■□□□ 1.12
CHMP1A-207ENST00000549328 NMT2O60551 498 aa22.05■■□□□ 1.12
CHMP1A-207ENST00000549328 PGK2P07205 417 aa22.05■■□□□ 1.12
CHMP1A-207ENST00000549328 MCCP23508 829 aa22.05■■□□□ 1.12
CHMP1A-207ENST00000549328 CHRDL2Q6WN34 429 aa22.05■■□□□ 1.12
CHMP1A-207ENST00000549328 CPXCR1Q8N123 301 aa22.05■■□□□ 1.12
CHMP1A-207ENST00000549328 STAG1Q8WVM7 1258 aa22.05■■□□□ 1.12
CHMP1A-207ENST00000549328 TOMM22Q9NS69 142 aa22.05■■□□□ 1.12
CHMP1A-207ENST00000549328 DIAPH3Q9NSV4 1193 aa22.05■■□□□ 1.12
CHMP1A-207ENST00000549328 TCP11L1Q9NUJ3 509 aa22.05■■□□□ 1.12
CHMP1A-207ENST00000549328 RIPK3Q9Y572 518 aa22.05■■□□□ 1.12
CHMP1A-207ENST00000549328 RCSD1Q6JBY9 416 aa22.04■■□□□ 1.12
CHMP1A-207ENST00000549328 ARRDC4Q8NCT1 418 aa22.04■■□□□ 1.12
CHMP1A-207ENST00000549328 DDX11Q96FC9 970 aa22.04■■□□□ 1.12
CHMP1A-207ENST00000549328 TINF2Q9BSI4 451 aa22.04■■□□□ 1.12
CHMP1A-207ENST00000549328 RAVER2Q9HCJ3 691 aaKnown RBP22.04■■□□□ 1.12
CHMP1A-207ENST00000549328 FBXO40Q9UH90 709 aa22.04■■□□□ 1.12
CHMP1A-207ENST00000549328 ALPK3Q96L96 1907 aa22.04■■□□□ 1.12
CHMP1A-207ENST00000549328 DNAJC25-GNG10A0A024R161 153 aa22.03■■□□□ 1.12
CHMP1A-207ENST00000549328 AKNAD1Q5T1N1 836 aa22.03■■□□□ 1.12
CHMP1A-207ENST00000549328 CWC27Q6UX04 472 aaKnown RBP22.03■■□□□ 1.12
CHMP1A-207ENST00000549328 MFSD6Q6ZSS7 791 aa22.03■■□□□ 1.12
CHMP1A-207ENST00000549328 MSL3Q8N5Y2 521 aaKnown RBP22.03■■□□□ 1.12
CHMP1A-207ENST00000549328 CHST13Q8NET6 341 aa22.03■■□□□ 1.12
CHMP1A-207ENST00000549328 PRO3102Q9H379 93 aa22.03■■□□□ 1.12
CHMP1A-207ENST00000549328 FRMPD3Q5JV73 1810 aa22.02■■□□□ 1.12
CHMP1A-207ENST00000549328 DNM1LO00429 736 aa22.02■■□□□ 1.12
CHMP1A-207ENST00000549328 NT5C2P49902 561 aa22.02■■□□□ 1.12
CHMP1A-207ENST00000549328 HAND2P61296 217 aa22.02■■□□□ 1.12
CHMP1A-207ENST00000549328 RRP12Q5JTH9 1297 aaKnown RBP22.02■■□□□ 1.12
CHMP1A-207ENST00000549328 PRAMEF19Q5SWL8 479 aa22.02■■□□□ 1.12
CHMP1A-207ENST00000549328 RNF41Q9H4P4 317 aaPredicted RBP22.02■■□□□ 1.12
CHMP1A-207ENST00000549328 ISY1Q9ULR0 285 aaKnown RBP22.02■■□□□ 1.12
CHMP1A-207ENST00000549328 TOP1P11387 765 aaKnown RBP22.01■■□□□ 1.11
CHMP1A-207ENST00000549328 SLC4A3P48751 1232 aa22.01■■□□□ 1.11
CHMP1A-207ENST00000549328 IKQ13123 557 aaPredicted RBP22.01■■□□□ 1.11
CHMP1A-207ENST00000549328 C7orf61Q8IZ16 206 aa22.01■■□□□ 1.11
CHMP1A-207ENST00000549328 TTC14Q96N46 770 aa22.01■■□□□ 1.11
CHMP1A-207ENST00000549328 RBM27Q9P2N5 1060 aaKnown RBP22.01■■□□□ 1.11
CHMP1A-207ENST00000549328 TRIOBPQ9H2D6 2365 aa22.01■■□□□ 1.11
CHMP1A-207ENST00000549328 PLXNA1Q9UIW2 1896 aa22■■□□□ 1.11
CHMP1A-207ENST00000549328 ZNF213O14771 459 aa22■■□□□ 1.11
CHMP1A-207ENST00000549328 MAMDC4Q6UXC1 1216 aa22■■□□□ 1.11
CHMP1A-207ENST00000549328 KCTD1Q719H9 257 aa22■■□□□ 1.11
CHMP1A-207ENST00000549328 ZNF467Q7Z7K2 595 aaPredicted RBP22■■□□□ 1.11
CHMP1A-207ENST00000549328 DCAF4Q8WV16 495 aa22■■□□□ 1.11
CHMP1A-207ENST00000549328 DSCC1Q9BVC3 393 aa22■■□□□ 1.11
CHMP1A-207ENST00000549328 PDE4AP27815 886 aa21.99■■□□□ 1.11
CHMP1A-207ENST00000549328 FXR1P51114 621 aaKnown RBP eCLIP21.99■■□□□ 1.11
CHMP1A-207ENST00000549328 TKFCQ3LXA3 575 aa21.99■■□□□ 1.11
CHMP1A-207ENST00000549328 ANKRD35Q8N283 1001 aa21.99■■□□□ 1.11
CHMP1A-207ENST00000549328 TMEM47Q9BQJ4 181 aa21.99■■□□□ 1.11
CHMP1A-207ENST00000549328 SENP6Q9GZR1 1112 aaPredicted RBP21.99■■□□□ 1.11
CHMP1A-207ENST00000549328 CNPY2Q9Y2B0 182 aa21.99■■□□□ 1.11
CHMP1A-207ENST00000549328 ZNF536O15090 1300 aa21.99■■□□□ 1.11
CHMP1A-207ENST00000549328 SYNGAP1Q96PV0 1343 aa21.99■■□□□ 1.11
CHMP1A-207ENST00000549328 A0A1W2PPC1 479 aa21.98■■□□□ 1.11
CHMP1A-207ENST00000549328 IRX6P78412 446 aaPredicted RBP21.98■■□□□ 1.11
CHMP1A-207ENST00000549328 LRRC26Q2I0M4 334 aa21.98■■□□□ 1.11
CHMP1A-207ENST00000549328 TBC1D10CQ8IV04 446 aa21.98■■□□□ 1.11
CHMP1A-207ENST00000549328 ESR2Q92731 530 aa21.98■■□□□ 1.11
CHMP1A-207ENST00000549328 PRR12Q9ULL5 1215 aa21.98■■□□□ 1.11
CHMP1A-207ENST00000549328 RANBP2P49792 3224 aaKnown RBP21.98■■□□□ 1.11
CHMP1A-207ENST00000549328 KBTBD13C9JR72 458 aa21.97■■□□□ 1.11
CHMP1A-207ENST00000549328 ZNF865P0CJ78 1059 aaPredicted RBP21.97■■□□□ 1.11
CHMP1A-207ENST00000549328 GJC2Q5T442 439 aaPredicted RBP21.97■■□□□ 1.11
CHMP1A-207ENST00000549328 TTC22Q5TAA0 569 aa21.97■■□□□ 1.11
CHMP1A-207ENST00000549328 ANO1Q5XXA6 986 aa21.97■■□□□ 1.11
CHMP1A-207ENST00000549328 BTNL9Q6UXG8 535 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms