RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 RASGRP2Q7LDG7 609 aa16.32■□□□□ 0.2
CACNB3-211ENST00000549226 CCDC84Q86UT8 332 aaPredicted RBP16.32■□□□□ 0.2
CACNB3-211ENST00000549226 SPICE1Q8N0Z3 855 aa16.32■□□□□ 0.2
CACNB3-211ENST00000549226 PROCA1Q8NCQ7 364 aaPredicted RBP16.32■□□□□ 0.2
CACNB3-211ENST00000549226 SLC10A4Q96EP9 437 aa16.32■□□□□ 0.2
CACNB3-211ENST00000549226 UBA5Q9GZZ9 404 aa16.32■□□□□ 0.2
CACNB3-211ENST00000549226 GLT8D2Q9H1C3 349 aa16.32■□□□□ 0.2
CACNB3-211ENST00000549226 ZNF408Q9H9D4 720 aa16.32■□□□□ 0.2
CACNB3-211ENST00000549226 ELP3Q9H9T3 547 aa16.32■□□□□ 0.2
CACNB3-211ENST00000549226 JMJD4Q9H9V9 463 aa16.32■□□□□ 0.2
CACNB3-211ENST00000549226 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
CACNB3-211ENST00000549226 MYPNQ86TC9 1320 aa16.31■□□□□ 0.2
CACNB3-211ENST00000549226 A0A0G2JLL6 359 aaPredicted RBP16.31■□□□□ 0.2
CACNB3-211ENST00000549226 PKP1Q13835 747 aa16.31■□□□□ 0.2
CACNB3-211ENST00000549226 ZYXQ15942 572 aaKnown RBP16.31■□□□□ 0.2
CACNB3-211ENST00000549226 SLC35G1Q2M3R5 365 aa16.31■□□□□ 0.2
CACNB3-211ENST00000549226 KRT40Q6A162 431 aa16.31■□□□□ 0.2
CACNB3-211ENST00000549226 TTBK2Q6IQ55 1244 aa16.31■□□□□ 0.2
CACNB3-211ENST00000549226 CLEC17AQ6ZS10 378 aa16.31■□□□□ 0.2
CACNB3-211ENST00000549226 BRAPQ7Z569 592 aa16.31■□□□□ 0.2
CACNB3-211ENST00000549226 PRRT2Q7Z6L0 340 aaPredicted RBP16.31■□□□□ 0.2
CACNB3-211ENST00000549226 GBP4Q96PP9 640 aa16.31■□□□□ 0.2
CACNB3-211ENST00000549226 SLF1Q9BQI6 1058 aa16.31■□□□□ 0.2
CACNB3-211ENST00000549226 ZDHHC9Q9Y397 364 aa16.31■□□□□ 0.2
CACNB3-211ENST00000549226 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 UBE2Q2LH0YL09 131 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 KIF3CO14782 793 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 PPFIA3O75145 1194 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 MMP1P03956 469 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 HMGCS2P54868 508 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 KIAA1755Q5JYT7 1200 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 FASTKD5Q7L8L6 764 aaKnown RBP16.3■□□□□ 0.2
CACNB3-211ENST00000549226 HOMER1Q86YM7 354 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 PRPF38AQ8NAV1 312 aaKnown RBP16.3■□□□□ 0.2
CACNB3-211ENST00000549226 OTUD5Q96G74 571 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 PIGSQ96S52 555 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 NUP88Q99567 741 aaPredicted RBP16.3■□□□□ 0.2
CACNB3-211ENST00000549226 FOXP1Q9H334 677 aaPredicted RBP16.3■□□□□ 0.2
CACNB3-211ENST00000549226 PRR12Q9ULL5 1215 aa16.3■□□□□ 0.2
CACNB3-211ENST00000549226 PASKQ96RG2 1323 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 USP17L15C9J2P7 530 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 USP17L13C9JLJ4 530 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 USP17L11C9JVI0 530 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 USP17L18D6R9N7 530 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 USP17L22D6RA61 530 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 USP17L17D6RBQ6 530 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 USP17L19D6RCP7 530 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 USP17L20D6RJB6 530 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 TOMM70O94826 608 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 ZBTB48P10074 688 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-211ENST00000549226 GNA11P29992 359 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 SLC16A2P36021 539 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 USP17L24Q0WX57 530 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 PABPC4Q13310 644 aaKnown RBP eCLIP16.29■□□□□ 0.2
CACNB3-211ENST00000549226 SNAPC2Q13487 334 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 CDC37Q16543 378 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-211ENST00000549226 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 ATL3Q6DD88 541 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 MOB2Q70IA6 237 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 BICD2Q8TD16 824 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 TNPO1Q92973 898 aaKnown RBP16.29■□□□□ 0.2
CACNB3-211ENST00000549226 OPTNQ96CV9 577 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 CLMNQ96JQ2 1002 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 PHF20Q9BVI0 1012 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 AMNQ9BXJ7 453 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 TANGO6Q9C0B7 1094 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 RANBP17Q9H2T7 1088 aaKnown RBP16.29■□□□□ 0.2
CACNB3-211ENST00000549226 RPAP3Q9H6T3 665 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-211ENST00000549226 VAT1LQ9HCJ6 419 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 VPS54Q9P1Q0 977 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 PPP1R9AQ9ULJ8 1098 aa16.29■□□□□ 0.2
CACNB3-211ENST00000549226 STXBP3O00186 592 aa16.28■□□□□ 0.2
CACNB3-211ENST00000549226 IRF6O14896 467 aa16.28■□□□□ 0.2
CACNB3-211ENST00000549226 U2AF2P26368 475 aaKnown RBP eCLIP16.28■□□□□ 0.2
CACNB3-211ENST00000549226 KRT2P35908 639 aa16.28■□□□□ 0.2
CACNB3-211ENST00000549226 NAPAP54920 295 aa16.28■□□□□ 0.2
CACNB3-211ENST00000549226 NLRP5P59047 1200 aa16.28■□□□□ 0.2
CACNB3-211ENST00000549226 KIF23Q02241 960 aaPredicted RBP16.28■□□□□ 0.2
CACNB3-211ENST00000549226 FSTL1Q12841 308 aa16.28■□□□□ 0.2
CACNB3-211ENST00000549226 GNL2Q13823 731 aaKnown RBP16.28■□□□□ 0.2
CACNB3-211ENST00000549226 DAGLBQ8NCG7 672 aa16.28■□□□□ 0.2
CACNB3-211ENST00000549226 AIFM3Q96NN9 605 aa16.28■□□□□ 0.2
CACNB3-211ENST00000549226 CPVLQ9H3G5 476 aa16.28■□□□□ 0.2
CACNB3-211ENST00000549226 C6orf50Q9HD87 102 aa16.28■□□□□ 0.2
CACNB3-211ENST00000549226 OTOFQ9HC10 1997 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 FLOT1O75955 427 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 HOXA7P31268 230 aaPredicted RBP16.27■□□□□ 0.2
CACNB3-211ENST00000549226 GTF2A2P52657 109 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 RESTQ13127 1097 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 QRICH1Q2TAL8 776 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 MCTP2Q6DN12 878 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 MCTP1Q6DN14 999 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 CATSPERGQ6ZRH7 1159 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 FBXO11Q86XK2 927 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 DIS3L2Q8IYB7 885 aaKnown RBP16.27■□□□□ 0.2
CACNB3-211ENST00000549226 KIFC2Q96AC6 838 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 ZMYND12Q9H0C1 365 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms