RNA–Protein interactions for RNA: ENST00000548814.1

GPD1-205, Transcript of glycerol-3-phosphate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene GPD1, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1-205ENST00000548814 CTCFLQ8NI51 663 aaPredicted RBP16.52■□□□□ 0.24
GPD1-205ENST00000548814 VCPKMTQ9H867 229 aa16.52■□□□□ 0.24
GPD1-205ENST00000548814 TMOD4Q9NZQ9 345 aa16.52■□□□□ 0.24
GPD1-205ENST00000548814 KCNH4Q9UQ05 1017 aa16.52■□□□□ 0.24
GPD1-205ENST00000548814 PTPN22Q9Y2R2 807 aa16.52■□□□□ 0.24
GPD1-205ENST00000548814 NID2Q14112 1375 aa16.52■□□□□ 0.24
GPD1-205ENST00000548814 A0A0G2JLL6 359 aaPredicted RBP16.51■□□□□ 0.23
GPD1-205ENST00000548814 POTEFA5A3E0 1075 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 CXCL11O14625 94 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 CPLX1O14810 134 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 SNAPC2Q13487 334 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 KIAA0100Q14667 2235 aaKnown RBP16.51■□□□□ 0.23
GPD1-205ENST00000548814 GRM4Q14833 912 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 CCDC96Q2M329 555 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 TTBK2Q6IQ55 1244 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 PRRT2Q7Z6L0 340 aaPredicted RBP16.51■□□□□ 0.23
GPD1-205ENST00000548814 CMTR1Q8N1G2 835 aaKnown RBP16.51■□□□□ 0.23
GPD1-205ENST00000548814 INTS4Q96HW7 963 aaKnown RBP16.51■□□□□ 0.23
GPD1-205ENST00000548814 ARHGAP39Q9C0H5 1083 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 SH2D4AQ9H788 454 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 GOPCQ9HD26 462 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.51■□□□□ 0.23
GPD1-205ENST00000548814 ADGRA2Q96PE1 1338 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 C19orf81C9J6K1 198 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 DHX16O60231 1041 aaKnown RBP16.51■□□□□ 0.23
GPD1-205ENST00000548814 PDHBP11177 359 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 VCAM1P19320 739 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 TAF1CQ15572 869 aaPredicted RBP16.51■□□□□ 0.23
GPD1-205ENST00000548814 OTUD7BQ6GQQ9 843 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 STAG2Q8N3U4 1231 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 CCDC82Q8N4S0 544 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 RPAP3Q9H6T3 665 aaPredicted RBP16.51■□□□□ 0.23
GPD1-205ENST00000548814 RBM28Q9NW13 759 aaKnown RBP16.51■□□□□ 0.23
GPD1-205ENST00000548814 MAD2L2Q9UI95 211 aa16.51■□□□□ 0.23
GPD1-205ENST00000548814 BAZ2BQ9UIF8 2168 aaKnown RBP16.5■□□□□ 0.23
GPD1-205ENST00000548814 CCDC196A0A1B0GTZ2 297 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 JAK2O60674 1132 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 PLEKHA8P1O95397 391 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 PARP1P09874 1014 aaKnown RBP16.5■□□□□ 0.23
GPD1-205ENST00000548814 KIF5BP33176 963 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 SLC16A2P36021 539 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 USP14P54578 494 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 PPP2R5BQ15173 497 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 NSUN7Q8NE18 718 aaKnown RBP16.5■□□□□ 0.23
GPD1-205ENST00000548814 GMCL1P1Q8NEA9 526 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 ERO1AQ96HE7 468 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 TANGO6Q9C0B7 1094 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 FBXO28Q9NVF7 368 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 SMC3Q9UQE7 1217 aa16.5■□□□□ 0.23
GPD1-205ENST00000548814 PALM3A6NDB9 673 aaPredicted RBP16.49■□□□□ 0.23
GPD1-205ENST00000548814 SNHG28P0DPA3 235 aa16.49■□□□□ 0.23
GPD1-205ENST00000548814 CETPP11597 493 aa16.49■□□□□ 0.23
GPD1-205ENST00000548814 SLC1A4P43007 532 aa16.49■□□□□ 0.23
GPD1-205ENST00000548814 SNAP25P60880 206 aa16.49■□□□□ 0.23
GPD1-205ENST00000548814 NTRK3Q16288 839 aa16.49■□□□□ 0.23
GPD1-205ENST00000548814 SH3D19Q5HYK7 790 aa16.49■□□□□ 0.23
GPD1-205ENST00000548814 GPAT2Q6NUI2 795 aa16.49■□□□□ 0.23
GPD1-205ENST00000548814 CPLX2Q6PUV4 134 aaKnown RBP16.49■□□□□ 0.23
GPD1-205ENST00000548814 PIBF1Q8WXW3 757 aa16.49■□□□□ 0.23
GPD1-205ENST00000548814 DDX11Q96FC9 970 aa16.49■□□□□ 0.23
GPD1-205ENST00000548814 LLPHQ9BRT6 129 aaKnown RBP16.49■□□□□ 0.23
GPD1-205ENST00000548814 UBA5Q9GZZ9 404 aa16.49■□□□□ 0.23
GPD1-205ENST00000548814 SYNPO2Q9UMS6 1093 aa16.49■□□□□ 0.23
GPD1-205ENST00000548814 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 TMEM232C9JQI7 657 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 TLR2O60603 784 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 PEX10O60683 326 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 BMP3P12645 472 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 GJB2P29033 226 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 SMARCC2Q8TAQ2 1214 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 PHKBQ93100 1093 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 ARMC5Q96C12 935 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 EFCC1Q9HA90 598 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 ZFYVE28Q9HCC9 887 aa16.48■□□□□ 0.23
GPD1-205ENST00000548814 KLRF2D3W0D1 207 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 PRKCSHP14314 528 aaPredicted RBP16.47■□□□□ 0.23
GPD1-205ENST00000548814 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 IKQ13123 557 aaPredicted RBP16.47■□□□□ 0.23
GPD1-205ENST00000548814 C17orf99Q6UX52 265 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 SRBD1Q8N5C6 995 aaKnown RBP16.47■□□□□ 0.23
GPD1-205ENST00000548814 DCAF4Q8WV16 495 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 VAT1LQ9HCJ6 419 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 LOC285556D6RIA3 1793 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 CDKL5O76039 1030 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 IFNAR1P17181 557 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 GNAQP50148 359 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 ASPRV1Q53RT3 343 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 FASTKD5Q7L8L6 764 aaKnown RBP16.47■□□□□ 0.23
GPD1-205ENST00000548814 GMCL1Q96IK5 515 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 C12orf42Q96LP6 360 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 SLC26A6Q9BXS9 759 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 ZCCHC17Q9NP64 241 aaKnown RBP16.47■□□□□ 0.23
GPD1-205ENST00000548814 PTCH2Q9Y6C5 1203 aa16.47■□□□□ 0.23
GPD1-205ENST00000548814 hCG_1642624A0A1W2PR95 340 aa16.46■□□□□ 0.23
GPD1-205ENST00000548814 PDHXO00330 501 aa16.46■□□□□ 0.23
GPD1-205ENST00000548814 WDR46O15213 610 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms