RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 RNPC3Q96LT9 517 aaKnown RBP19.75■□□□□ 0.75
SSH1-208ENST00000548522 STRBPQ96SI9 672 aaKnown RBP19.75■□□□□ 0.75
SSH1-208ENST00000548522 SLF1Q9BQI6 1058 aa19.75■□□□□ 0.75
SSH1-208ENST00000548522 DIS3Q9Y2L1 958 aaKnown RBP19.75■□□□□ 0.75
SSH1-208ENST00000548522 TACC3Q9Y6A5 838 aa19.75■□□□□ 0.75
SSH1-208ENST00000548522 PLXNA1Q9UIW2 1896 aa19.75■□□□□ 0.75
SSH1-208ENST00000548522 GSG1L2A8MUP6 293 aa19.74■□□□□ 0.75
SSH1-208ENST00000548522 KIAA0355O15063 1070 aa19.74■□□□□ 0.75
SSH1-208ENST00000548522 ADCY6O43306 1168 aa19.74■□□□□ 0.75
SSH1-208ENST00000548522 SNAI1O95863 264 aaPredicted RBP19.74■□□□□ 0.75
SSH1-208ENST00000548522 MS4A1P11836 297 aa19.74■□□□□ 0.75
SSH1-208ENST00000548522 C20orf194Q5TEA3 1177 aa19.74■□□□□ 0.75
SSH1-208ENST00000548522 TEX13BQ9BXU2 312 aa19.74■□□□□ 0.75
SSH1-208ENST00000548522 EPB41L4AQ9HCS5 686 aaPredicted RBP19.74■□□□□ 0.75
SSH1-208ENST00000548522 CNPY2Q9Y2B0 182 aa19.74■□□□□ 0.75
SSH1-208ENST00000548522 MYH7P12883 1935 aa19.74■□□□□ 0.75
SSH1-208ENST00000548522 ZNFX1Q9P2E3 1918 aaKnown RBP19.73■□□□□ 0.75
SSH1-208ENST00000548522 RAG1P15918 1043 aa19.73■□□□□ 0.75
SSH1-208ENST00000548522 SLC4A3P48751 1232 aa19.73■□□□□ 0.75
SSH1-208ENST00000548522 ACLYP53396 1101 aa19.73■□□□□ 0.75
SSH1-208ENST00000548522 FAAP100Q0VG06 881 aa19.73■□□□□ 0.75
SSH1-208ENST00000548522 OSBP2Q969R2 916 aa19.73■□□□□ 0.75
SSH1-208ENST00000548522 LRRCC1Q9C099 1032 aa19.73■□□□□ 0.75
SSH1-208ENST00000548522 ZHX1Q9UKY1 873 aaPredicted RBP19.73■□□□□ 0.75
SSH1-208ENST00000548522 TTC28Q96AY4 2481 aa19.73■□□□□ 0.75
SSH1-208ENST00000548522 DNAJC25-GNG10A0A024R161 153 aa19.72■□□□□ 0.75
SSH1-208ENST00000548522 MINDY4BA8MYZ0 360 aa19.72■□□□□ 0.75
SSH1-208ENST00000548522 F5H6K3 240 aa19.72■□□□□ 0.75
SSH1-208ENST00000548522 PRDM1O75626 825 aa19.72■□□□□ 0.75
SSH1-208ENST00000548522 COPB2P35606 906 aa19.72■□□□□ 0.75
SSH1-208ENST00000548522 KLRC3Q07444 240 aa19.72■□□□□ 0.75
SSH1-208ENST00000548522 ZSCAN25Q6NSZ9 544 aa19.72■□□□□ 0.75
SSH1-208ENST00000548522 CPXCR1Q8N123 301 aa19.72■□□□□ 0.75
SSH1-208ENST00000548522 FGD4Q96M96 766 aa19.72■□□□□ 0.75
SSH1-208ENST00000548522 TMEM39AQ9NV64 488 aa19.72■□□□□ 0.75
SSH1-208ENST00000548522 IGKV6D-41A0A0C4DH26 115 aa19.71■□□□□ 0.75
SSH1-208ENST00000548522 FPGSQ05932 587 aa19.71■□□□□ 0.75
SSH1-208ENST00000548522 SBK1Q52WX2 424 aa19.71■□□□□ 0.75
SSH1-208ENST00000548522 CCSAPQ6IQ19 270 aaPredicted RBP19.71■□□□□ 0.75
SSH1-208ENST00000548522 LRRC47Q8N1G4 583 aaKnown RBP19.71■□□□□ 0.75
SSH1-208ENST00000548522 KLHDC9Q8NEP7 349 aa19.71■□□□□ 0.75
SSH1-208ENST00000548522 MKNK2Q9HBH9 465 aa19.71■□□□□ 0.75
SSH1-208ENST00000548522 RAVER2Q9HCJ3 691 aaKnown RBP19.71■□□□□ 0.75
SSH1-208ENST00000548522 STARD7Q9NQZ5 370 aa19.71■□□□□ 0.75
SSH1-208ENST00000548522 NYAP2Q9P242 653 aa19.71■□□□□ 0.75
SSH1-208ENST00000548522 SYNGAP1Q96PV0 1343 aa19.71■□□□□ 0.75
SSH1-208ENST00000548522 M0R2C6 588 aa19.7■□□□□ 0.74
SSH1-208ENST00000548522 FOSL2P15408 326 aa19.7■□□□□ 0.74
SSH1-208ENST00000548522 KCNA10Q16322 511 aa19.7■□□□□ 0.74
SSH1-208ENST00000548522 ANKRD33Q7Z3H0 272 aa19.7■□□□□ 0.74
SSH1-208ENST00000548522 KIFC2Q96AC6 838 aa19.7■□□□□ 0.74
SSH1-208ENST00000548522 DDX11Q96FC9 970 aa19.7■□□□□ 0.74
SSH1-208ENST00000548522 ECHDC1Q9NTX5 307 aa19.7■□□□□ 0.74
SSH1-208ENST00000548522 CLIP2Q9UDT6 1046 aa19.7■□□□□ 0.74
SSH1-208ENST00000548522 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
SSH1-208ENST00000548522 CHD9Q3L8U1 2897 aa19.69■□□□□ 0.74
SSH1-208ENST00000548522 MAMDC4Q6UXC1 1216 aa19.69■□□□□ 0.74
SSH1-208ENST00000548522 KBTBD3Q8NAB2 608 aa19.69■□□□□ 0.74
SSH1-208ENST00000548522 CEP95Q96GE4 821 aa19.69■□□□□ 0.74
SSH1-208ENST00000548522 TSEN34Q9BSV6 310 aaKnown RBP19.69■□□□□ 0.74
SSH1-208ENST00000548522 TBX21Q9UL17 535 aa19.69■□□□□ 0.74
SSH1-208ENST00000548522 FAM184BQ9ULE4 1060 aa19.69■□□□□ 0.74
SSH1-208ENST00000548522 GPAA1O43292 621 aa19.68■□□□□ 0.74
SSH1-208ENST00000548522 GRIN2CQ14957 1233 aa19.68■□□□□ 0.74
SSH1-208ENST00000548522 MSL3Q8N5Y2 521 aaKnown RBP19.68■□□□□ 0.74
SSH1-208ENST00000548522 PRPF38AQ8NAV1 312 aaKnown RBP19.68■□□□□ 0.74
SSH1-208ENST00000548522 USP38Q8NB14 1042 aa19.68■□□□□ 0.74
SSH1-208ENST00000548522 APPBP2Q92624 585 aa19.68■□□□□ 0.74
SSH1-208ENST00000548522 SLC38A10Q9HBR0 1119 aa19.68■□□□□ 0.74
SSH1-208ENST00000548522 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.68■□□□□ 0.74
SSH1-208ENST00000548522 MOXD2PA6NHM9 499 aa19.67■□□□□ 0.74
SSH1-208ENST00000548522 ATP2A1O14983 1001 aa19.67■□□□□ 0.74
SSH1-208ENST00000548522 DUSP11O75319 330 aaKnown RBP19.67■□□□□ 0.74
SSH1-208ENST00000548522 C6orf222P0C671 652 aaPredicted RBP19.67■□□□□ 0.74
SSH1-208ENST00000548522 DNAJB2P25686 324 aa19.67■□□□□ 0.74
SSH1-208ENST00000548522 ACVR2BQ13705 512 aa19.67■□□□□ 0.74
SSH1-208ENST00000548522 GIMAP6Q6P9H5 292 aa19.67■□□□□ 0.74
SSH1-208ENST00000548522 NUP133Q8WUM0 1156 aa19.67■□□□□ 0.74
SSH1-208ENST00000548522 CHMP4CQ96CF2 233 aa19.67■□□□□ 0.74
SSH1-208ENST00000548522 TOX2Q96NM4 488 aa19.67■□□□□ 0.74
SSH1-208ENST00000548522 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.67■□□□□ 0.741e-6■■■□□ 17.6
SSH1-208ENST00000548522 HOMER2Q9NSB8 354 aa19.67■□□□□ 0.74
SSH1-208ENST00000548522 DDX49Q9Y6V7 483 aaKnown RBP19.67■□□□□ 0.74
SSH1-208ENST00000548522 DCDC2CA8MYV0 355 aa19.66■□□□□ 0.74
SSH1-208ENST00000548522 ZBED4O75132 1171 aa19.66■□□□□ 0.74
SSH1-208ENST00000548522 PTGS1P23219 599 aa19.66■□□□□ 0.74
SSH1-208ENST00000548522 TDO2P48775 406 aa19.66■□□□□ 0.74
SSH1-208ENST00000548522 CCDC144BQ3MJ40 725 aa19.66■□□□□ 0.74
SSH1-208ENST00000548522 ZNF467Q7Z7K2 595 aaPredicted RBP19.66■□□□□ 0.74
SSH1-208ENST00000548522 KATNBL1Q9H079 304 aa19.66■□□□□ 0.74
SSH1-208ENST00000548522 MTMR4Q9NYA4 1195 aa19.66■□□□□ 0.74
SSH1-208ENST00000548522 RCAN3Q9UKA8 241 aa19.66■□□□□ 0.74
SSH1-208ENST00000548522 CTAGE5O15320 804 aa19.65■□□□□ 0.74
SSH1-208ENST00000548522 RNF113AO15541 343 aaKnown RBP19.65■□□□□ 0.74
SSH1-208ENST00000548522 TIMP1P01033 207 aa19.65■□□□□ 0.74
SSH1-208ENST00000548522 ASGR1P07306 291 aa19.65■□□□□ 0.74
SSH1-208ENST00000548522 CST5P28325 142 aaPredicted RBP19.65■□□□□ 0.74
SSH1-208ENST00000548522 CNTN2Q02246 1040 aa19.65■□□□□ 0.74
SSH1-208ENST00000548522 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.65■□□□□ 0.74
SSH1-208ENST00000548522 C16orf59Q7L2K0 433 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms