RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PDLIM7Q9NR12 457 aa24.28■■□□□ 1.48
SSH1-207ENST00000547862 ZHX1Q9UKY1 873 aaPredicted RBP24.28■■□□□ 1.48
SSH1-207ENST00000547862 CNPY2Q9Y2B0 182 aa24.28■■□□□ 1.48
SSH1-207ENST00000547862 RIPK3Q9Y572 518 aa24.28■■□□□ 1.48
SSH1-207ENST00000547862 IGKV6D-41A0A0C4DH26 115 aa24.27■■□□□ 1.48
SSH1-207ENST00000547862 AKR1A1P14550 325 aa24.27■■□□□ 1.48
SSH1-207ENST00000547862 LRRFIP1Q32MZ4 808 aaKnown RBP24.27■■□□□ 1.48
SSH1-207ENST00000547862 SH3RF1Q7Z6J0 888 aa24.27■■□□□ 1.48
SSH1-207ENST00000547862 IFNL3Q8IZI9 196 aa24.27■■□□□ 1.48
SSH1-207ENST00000547862 BADQ92934 168 aa24.27■■□□□ 1.48
SSH1-207ENST00000547862 NAPBQ9H115 298 aa24.27■■□□□ 1.48
SSH1-207ENST00000547862 ZNF287Q9HBT7 754 aa24.27■■□□□ 1.48
SSH1-207ENST00000547862 MTMR10Q9NXD2 777 aa24.27■■□□□ 1.48
SSH1-207ENST00000547862 PCDHB15Q9Y5E8 787 aa24.27■■□□□ 1.48
SSH1-207ENST00000547862 TTC41PQ6P2S7 1318 aa24.27■■□□□ 1.48
SSH1-207ENST00000547862 ERC2O15083 957 aa24.26■■□□□ 1.47
SSH1-207ENST00000547862 ZBED4O75132 1171 aa24.26■■□□□ 1.47
SSH1-207ENST00000547862 TSPY3P0CV98 308 aa24.26■■□□□ 1.47
SSH1-207ENST00000547862 TSPY8P0CW00 308 aa24.26■■□□□ 1.47
SSH1-207ENST00000547862 SNX17Q15036 470 aa24.26■■□□□ 1.47
SSH1-207ENST00000547862 RNF180Q86T96 592 aa24.26■■□□□ 1.47
SSH1-207ENST00000547862 PRPF38AQ8NAV1 312 aaKnown RBP24.26■■□□□ 1.47
SSH1-207ENST00000547862 PI4K2BQ8TCG2 481 aa24.26■■□□□ 1.47
SSH1-207ENST00000547862 NACAP1Q9BZK3 213 aa24.26■■□□□ 1.47
SSH1-207ENST00000547862 NRBP1Q9UHY1 535 aa24.26■■□□□ 1.47
SSH1-207ENST00000547862 DIS3Q9Y2L1 958 aaKnown RBP24.26■■□□□ 1.47
SSH1-207ENST00000547862 LAMA2P24043 3122 aaKnown RBP24.25■■□□□ 1.47
SSH1-207ENST00000547862 PATL2C9JE40 543 aaKnown RBP24.25■■□□□ 1.47
SSH1-207ENST00000547862 ZNF865P0CJ78 1059 aaPredicted RBP24.25■■□□□ 1.47
SSH1-207ENST00000547862 HOMER2Q9NSB8 354 aa24.25■■□□□ 1.47
SSH1-207ENST00000547862 MTMR4Q9NYA4 1195 aa24.25■■□□□ 1.47
SSH1-207ENST00000547862 PHF24Q9UPV7 400 aa24.25■■□□□ 1.47
SSH1-207ENST00000547862 A0A1W2PQ45 241 aaPredicted RBP24.24■■□□□ 1.47
SSH1-207ENST00000547862 A0A1W2PQY0 241 aa24.24■■□□□ 1.47
SSH1-207ENST00000547862 PQBP1O60828 265 aaKnown RBP24.24■■□□□ 1.47
SSH1-207ENST00000547862 TTLL1O95922 423 aa24.24■■□□□ 1.47
SSH1-207ENST00000547862 TLE2Q04725 743 aa24.24■■□□□ 1.47
SSH1-207ENST00000547862 PDE4BQ07343 736 aa24.24■■□□□ 1.47
SSH1-207ENST00000547862 IKQ13123 557 aaPredicted RBP24.24■■□□□ 1.47
SSH1-207ENST00000547862 C9orf50Q5SZB4 431 aa24.24■■□□□ 1.47
SSH1-207ENST00000547862 CCDC129Q6ZRS4 1044 aa24.24■■□□□ 1.47
SSH1-207ENST00000547862 TRIM43BA6NCK2 446 aa24.23■■□□□ 1.47
SSH1-207ENST00000547862 PPARAQ07869 468 aa24.23■■□□□ 1.47
SSH1-207ENST00000547862 SHHQ15465 462 aa24.23■■□□□ 1.47
SSH1-207ENST00000547862 SLFN13Q68D06 897 aa24.23■■□□□ 1.47
SSH1-207ENST00000547862 TRIM43Q96BQ3 446 aaPredicted RBP24.23■■□□□ 1.47
SSH1-207ENST00000547862 STXBP5LQ9Y2K9 1186 aa24.23■■□□□ 1.47
SSH1-207ENST00000547862 SYNRGQ9UMZ2 1314 aa24.23■■□□□ 1.47
SSH1-207ENST00000547862 PLIN4Q96Q06 1357 aa24.23■■□□□ 1.47
SSH1-207ENST00000547862 LRRC37A2A6NM11 1700 aa24.23■■□□□ 1.47
SSH1-207ENST00000547862 DLL1O00548 723 aa24.22■■□□□ 1.47
SSH1-207ENST00000547862 SLC3A2P08195 630 aaKnown RBP24.22■■□□□ 1.47
SSH1-207ENST00000547862 MX1P20591 662 aa24.22■■□□□ 1.47
SSH1-207ENST00000547862 ANKRD35Q8N283 1001 aa24.22■■□□□ 1.47
SSH1-207ENST00000547862 FEM1BQ9UK73 627 aa24.22■■□□□ 1.47
SSH1-207ENST00000547862 MTMR7Q9Y216 660 aa24.22■■□□□ 1.47
SSH1-207ENST00000547862 SYNGAP1Q96PV0 1343 aa24.21■■□□□ 1.47
SSH1-207ENST00000547862 CLTBP09497 229 aa24.21■■□□□ 1.47
SSH1-207ENST00000547862 BMP3P12645 472 aa24.21■■□□□ 1.47
SSH1-207ENST00000547862 TFAP4Q01664 338 aa24.21■■□□□ 1.47
SSH1-207ENST00000547862 ZMYM1Q5SVZ6 1142 aa24.21■■□□□ 1.47
SSH1-207ENST00000547862 GMCL1P1Q8NEA9 526 aa24.21■■□□□ 1.47
SSH1-207ENST00000547862 SLC38A10Q9HBR0 1119 aa24.21■■□□□ 1.47
SSH1-207ENST00000547862 ZBTB47Q9UFB7 747 aaPredicted RBP24.21■■□□□ 1.47
SSH1-207ENST00000547862 DNAJC25-GNG10A0A024R161 153 aa24.2■■□□□ 1.46
SSH1-207ENST00000547862 TMEM232C9JQI7 657 aa24.2■■□□□ 1.46
SSH1-207ENST00000547862 ADAMTS4O75173 837 aa24.2■■□□□ 1.46
SSH1-207ENST00000547862 SNAI1O95863 264 aaPredicted RBP24.2■■□□□ 1.46
SSH1-207ENST00000547862 CTDSPL2Q05D32 466 aa24.2■■□□□ 1.46
SSH1-207ENST00000547862 ZNF697Q5TEC3 545 aa24.2■■□□□ 1.46
SSH1-207ENST00000547862 NEDD1Q8NHV4 660 aa24.2■■□□□ 1.46
SSH1-207ENST00000547862 FAM184BQ9ULE4 1060 aa24.2■■□□□ 1.46
SSH1-207ENST00000547862 MYADML2A6NDP7 307 aa24.19■■□□□ 1.46
SSH1-207ENST00000547862 IRX5P78411 483 aaPredicted RBP24.19■■□□□ 1.46
SSH1-207ENST00000547862 RASGRP2Q7LDG7 609 aa24.19■■□□□ 1.46
SSH1-207ENST00000547862 MKL1Q969V6 931 aa24.19■■□□□ 1.46
SSH1-207ENST00000547862 GUCD1Q96NT3 240 aa24.19■■□□□ 1.46
SSH1-207ENST00000547862 STARD7Q9NQZ5 370 aa24.19■■□□□ 1.46
SSH1-207ENST00000547862 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.19■■□□□ 1.46
SSH1-207ENST00000547862 TSPY2A6NKD2 308 aa24.18■■□□□ 1.46
SSH1-207ENST00000547862 ATP2A1O14983 1001 aa24.18■■□□□ 1.46
SSH1-207ENST00000547862 ITGB8P26012 769 aa24.18■■□□□ 1.46
SSH1-207ENST00000547862 STAT2P52630 851 aa24.18■■□□□ 1.46
SSH1-207ENST00000547862 RRP1P56182 461 aaKnown RBP24.18■■□□□ 1.46
SSH1-207ENST00000547862 MSL3Q8N5Y2 521 aaKnown RBP24.18■■□□□ 1.46
SSH1-207ENST00000547862 STX8Q9UNK0 236 aa24.18■■□□□ 1.46
SSH1-207ENST00000547862 ADCY6O43306 1168 aa24.17■■□□□ 1.46
SSH1-207ENST00000547862 C6orf222P0C671 652 aaPredicted RBP24.17■■□□□ 1.46
SSH1-207ENST00000547862 RAG1P15918 1043 aa24.17■■□□□ 1.46
SSH1-207ENST00000547862 SLC1A4P43007 532 aa24.17■■□□□ 1.46
SSH1-207ENST00000547862 ACLYP53396 1101 aa24.17■■□□□ 1.46
SSH1-207ENST00000547862 SNAP25P60880 206 aa24.17■■□□□ 1.46
SSH1-207ENST00000547862 C1orf53Q5VUE5 145 aa24.17■■□□□ 1.46
SSH1-207ENST00000547862 ARMCX2Q7L311 632 aa24.17■■□□□ 1.46
SSH1-207ENST00000547862 FGD4Q96M96 766 aa24.17■■□□□ 1.46
SSH1-207ENST00000547862 INCENPQ9NQS7 918 aa24.17■■□□□ 1.46
SSH1-207ENST00000547862 FBXO40Q9UH90 709 aa24.17■■□□□ 1.46
SSH1-207ENST00000547862 LCTP09848 1927 aa24.17■■□□□ 1.46
SSH1-207ENST00000547862 NMT2O60551 498 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 MCCP23508 829 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms