RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 CKAP2LQ8IYA6 745 aa9.33□□□□□ -0.92
CCDC65-203ENST00000547861 CCDC82Q8N4S0 544 aa9.33□□□□□ -0.92
CCDC65-203ENST00000547861 CERS5Q8N5B7 392 aa9.33□□□□□ -0.92
CCDC65-203ENST00000547861 SLC44A5Q8NCS7 719 aa9.33□□□□□ -0.92
CCDC65-203ENST00000547861 MRPS27Q92552 414 aaKnown RBP9.33□□□□□ -0.92
CCDC65-203ENST00000547861 FBXW7Q969H0 707 aa9.33□□□□□ -0.92
CCDC65-203ENST00000547861 SHISA4Q96DD7 197 aa9.33□□□□□ -0.92
CCDC65-203ENST00000547861 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCDC65-203ENST00000547861 GBA2Q9HCG7 927 aaPredicted RBP9.33□□□□□ -0.92
CCDC65-203ENST00000547861 KCNJ14Q9UNX9 436 aa9.33□□□□□ -0.92
CCDC65-203ENST00000547861 ASTN2O75129 1339 aaPredicted RBP9.32□□□□□ -0.92
CCDC65-203ENST00000547861 ATAD5Q96QE3 1844 aa9.32□□□□□ -0.92
CCDC65-203ENST00000547861 CA12O43570 354 aa9.32□□□□□ -0.92
CCDC65-203ENST00000547861 LSM11P83369 360 aaKnown RBP eCLIP9.32□□□□□ -0.92
CCDC65-203ENST00000547861 NOGQ13253 232 aa9.32□□□□□ -0.92
CCDC65-203ENST00000547861 SNW1Q13573 536 aaKnown RBP9.32□□□□□ -0.92
CCDC65-203ENST00000547861 PKN1Q16512 942 aa9.32□□□□□ -0.92
CCDC65-203ENST00000547861 UVSSAQ2YD98 709 aa9.32□□□□□ -0.92
CCDC65-203ENST00000547861 DHX37Q8IY37 1157 aaKnown RBP9.32□□□□□ -0.92
CCDC65-203ENST00000547861 DIS3L2Q8IYB7 885 aaKnown RBP9.32□□□□□ -0.92
CCDC65-203ENST00000547861 C2orf69Q8N8R5 385 aa9.32□□□□□ -0.92
CCDC65-203ENST00000547861 ENGASEQ8NFI3 743 aa9.32□□□□□ -0.92
CCDC65-203ENST00000547861 GGA3Q9NZ52 723 aa9.32□□□□□ -0.92
CCDC65-203ENST00000547861 SUGT1Q9Y2Z0 365 aa9.32□□□□□ -0.92
CCDC65-203ENST00000547861 MRVI1Q9Y6F6 885 aa9.32□□□□□ -0.92
CCDC65-203ENST00000547861 PLIN4Q96Q06 1357 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 CCDC85CA6NKD9 419 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 PRPF3O43395 683 aaKnown RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 RASA1P20936 1047 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 PLCD1P51178 756 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 TFAP4Q01664 338 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 PTPAQ15257 358 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 SAFBQ15424 915 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 SF3A1Q15459 793 aaKnown RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 ADALQ6DHV7 355 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 RGMBQ6NW40 437 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 RSBN1LQ6PCB5 846 aaPredicted RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 C16orf86Q6ZW13 317 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 NOSTRINQ8IVI9 506 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 SULF1Q8IWU6 871 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 FAM43AQ8N2R8 423 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 CTCFLQ8NI51 663 aaPredicted RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 MAP3K14Q99558 947 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 MFRPQ9BY79 579 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 IL17RBQ9NRM6 502 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 MYH7BA7E2Y1 1941 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 hCG_1642624A0A1W2PR95 340 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 BTBD18B2RXH4 712 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 F8W031 263 aaPredicted RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 KINO60870 393 aaKnown RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 ZNF280AP59817 542 aaPredicted RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 AKAP17AQ02040 695 aaKnown RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 SLC39A14Q15043 492 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 AXDND1Q5T1B0 1012 aaPredicted RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 FMR1NBQ8N0W7 255 aaPredicted RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 AGBL3Q8NEM8 1001 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 ANKS1AQ92625 1134 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 TRIM44Q96DX7 344 aaPredicted RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 MXD3Q9BW11 206 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 FOXP1Q9H334 677 aaPredicted RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 MKNK2Q9HBH9 465 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 RRAGDQ9NQL2 400 aaPredicted RBP9.31□□□□□ -0.92
CCDC65-203ENST00000547861 VPS54Q9P1Q0 977 aa9.31□□□□□ -0.92
CCDC65-203ENST00000547861 A0A1B0GVL5 298 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 USP17L3A6NCW0 530 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 USP17L4A6NCW7 530 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 FAM155AB1AL88 458 aaPredicted RBP9.3□□□□□ -0.92
CCDC65-203ENST00000547861 CTAGE5O15320 804 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 PPP6R2O75170 966 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 WDHD1O75717 1129 aaPredicted RBP9.3□□□□□ -0.92
CCDC65-203ENST00000547861 TSPY3P0CV98 308 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 TSPY8P0CW00 308 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 CDK8P49336 464 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 ZNF157P51786 506 aaPredicted RBP9.3□□□□□ -0.92
CCDC65-203ENST00000547861 NDUFA8P51970 172 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 NR5A1Q13285 461 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 GRM4Q14833 912 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 CCDC178Q5BJE1 867 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 ANGEL2Q5VTE6 544 aaKnown RBP9.3□□□□□ -0.92
CCDC65-203ENST00000547861 USP17L1Q7RTZ2 530 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 DGKHQ86XP1 1220 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 SRBD1Q8N5C6 995 aaKnown RBP9.3□□□□□ -0.92
CCDC65-203ENST00000547861 PNMA1Q8ND90 353 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 FAM200AQ8TCP9 573 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 OXER1Q8TDS5 423 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 CDCA5Q96FF9 252 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 GMLQ99445 158 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 PHF20Q9BVI0 1012 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 MCOLN1Q9GZU1 580 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 KAT14Q9H8E8 782 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 TCP11L1Q9NUJ3 509 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 USP25Q9UHP3 1055 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 TTF2Q9UNY4 1162 aaKnown RBP9.3□□□□□ -0.92
CCDC65-203ENST00000547861 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
CCDC65-203ENST00000547861 C2orf72A6NCS6 295 aa9.29□□□□□ -0.92
CCDC65-203ENST00000547861 PFKFB1P16118 471 aa9.29□□□□□ -0.92
CCDC65-203ENST00000547861 MARCKSP29966 332 aaPredicted RBP9.29□□□□□ -0.92
CCDC65-203ENST00000547861 PBX2P40425 430 aa9.29□□□□□ -0.92
CCDC65-203ENST00000547861 TOB1P50616 345 aaPredicted RBP9.29□□□□□ -0.92
CCDC65-203ENST00000547861 ANO6Q4KMQ2 910 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms