RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 COLQQ9Y215 455 aaPredicted RBP22.1■■□□□ 1.13
CHMP1A-203ENST00000547614 DIS3Q9Y2L1 958 aaKnown RBP22.1■■□□□ 1.13
CHMP1A-203ENST00000547614 CCDC171Q6TFL3 1326 aa22.09■■□□□ 1.13
CHMP1A-203ENST00000547614 FDX1P10109 184 aa22.09■■□□□ 1.13
CHMP1A-203ENST00000547614 CNGA1P29973 690 aa22.09■■□□□ 1.13
CHMP1A-203ENST00000547614 GMCL1Q96IK5 515 aa22.09■■□□□ 1.13
CHMP1A-203ENST00000547614 IL17RBQ9NRM6 502 aa22.09■■□□□ 1.13
CHMP1A-203ENST00000547614 ZNFX1Q9P2E3 1918 aaKnown RBP22.08■■□□□ 1.13
CHMP1A-203ENST00000547614 RANBP6O60518 1105 aaKnown RBP22.08■■□□□ 1.13
CHMP1A-203ENST00000547614 COL6A1P12109 1028 aa22.08■■□□□ 1.13
CHMP1A-203ENST00000547614 NOVP48745 357 aa22.08■■□□□ 1.13
CHMP1A-203ENST00000547614 SNRNP48Q6IEG0 339 aaKnown RBP22.08■■□□□ 1.13
CHMP1A-203ENST00000547614 TRPV1Q8NER1 839 aa22.08■■□□□ 1.13
CHMP1A-203ENST00000547614 KIFC2Q96AC6 838 aa22.08■■□□□ 1.13
CHMP1A-203ENST00000547614 SLC38A10Q9HBR0 1119 aa22.08■■□□□ 1.13
CHMP1A-203ENST00000547614 STX8Q9UNK0 236 aa22.08■■□□□ 1.13
CHMP1A-203ENST00000547614 CTDP1Q9Y5B0 961 aaPredicted RBP22.08■■□□□ 1.13
CHMP1A-203ENST00000547614 TACC3Q9Y6A5 838 aa22.08■■□□□ 1.13
CHMP1A-203ENST00000547614 HIP1O00291 1037 aa22.07■■□□□ 1.12
CHMP1A-203ENST00000547614 PCP11498 1178 aaKnown RBP22.07■■□□□ 1.12
CHMP1A-203ENST00000547614 OAZ1P54368 228 aa22.07■■□□□ 1.12
CHMP1A-203ENST00000547614 ZNF792Q3KQV3 632 aa22.07■■□□□ 1.12
CHMP1A-203ENST00000547614 CHURC1Q8WUH1 139 aa22.07■■□□□ 1.12
CHMP1A-203ENST00000547614 NRBP1Q9UHY1 535 aa22.07■■□□□ 1.12
CHMP1A-203ENST00000547614 SEPT4O43236 478 aa22.06■■□□□ 1.12
CHMP1A-203ENST00000547614 PLA2G6O60733 806 aa22.06■■□□□ 1.12
CHMP1A-203ENST00000547614 SLC1A4P43007 532 aa22.06■■□□□ 1.12
CHMP1A-203ENST00000547614 STAT2P52630 851 aa22.06■■□□□ 1.12
CHMP1A-203ENST00000547614 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.06■■□□□ 1.12
CHMP1A-203ENST00000547614 FAM160B2Q86V87 743 aa22.06■■□□□ 1.12
CHMP1A-203ENST00000547614 PFASO15067 1338 aa22.06■■□□□ 1.12
CHMP1A-203ENST00000547614 TMEM232C9JQI7 657 aa22.05■■□□□ 1.12
CHMP1A-203ENST00000547614 NMT2O60551 498 aa22.05■■□□□ 1.12
CHMP1A-203ENST00000547614 PGK2P07205 417 aa22.05■■□□□ 1.12
CHMP1A-203ENST00000547614 MCCP23508 829 aa22.05■■□□□ 1.12
CHMP1A-203ENST00000547614 CHRDL2Q6WN34 429 aa22.05■■□□□ 1.12
CHMP1A-203ENST00000547614 CPXCR1Q8N123 301 aa22.05■■□□□ 1.12
CHMP1A-203ENST00000547614 STAG1Q8WVM7 1258 aa22.05■■□□□ 1.12
CHMP1A-203ENST00000547614 TOMM22Q9NS69 142 aa22.05■■□□□ 1.12
CHMP1A-203ENST00000547614 DIAPH3Q9NSV4 1193 aa22.05■■□□□ 1.12
CHMP1A-203ENST00000547614 TCP11L1Q9NUJ3 509 aa22.05■■□□□ 1.12
CHMP1A-203ENST00000547614 RIPK3Q9Y572 518 aa22.05■■□□□ 1.12
CHMP1A-203ENST00000547614 RCSD1Q6JBY9 416 aa22.04■■□□□ 1.12
CHMP1A-203ENST00000547614 ARRDC4Q8NCT1 418 aa22.04■■□□□ 1.12
CHMP1A-203ENST00000547614 DDX11Q96FC9 970 aa22.04■■□□□ 1.12
CHMP1A-203ENST00000547614 TINF2Q9BSI4 451 aa22.04■■□□□ 1.12
CHMP1A-203ENST00000547614 RAVER2Q9HCJ3 691 aaKnown RBP22.04■■□□□ 1.12
CHMP1A-203ENST00000547614 FBXO40Q9UH90 709 aa22.04■■□□□ 1.12
CHMP1A-203ENST00000547614 ALPK3Q96L96 1907 aa22.04■■□□□ 1.12
CHMP1A-203ENST00000547614 DNAJC25-GNG10A0A024R161 153 aa22.03■■□□□ 1.12
CHMP1A-203ENST00000547614 AKNAD1Q5T1N1 836 aa22.03■■□□□ 1.12
CHMP1A-203ENST00000547614 CWC27Q6UX04 472 aaKnown RBP22.03■■□□□ 1.12
CHMP1A-203ENST00000547614 MFSD6Q6ZSS7 791 aa22.03■■□□□ 1.12
CHMP1A-203ENST00000547614 MSL3Q8N5Y2 521 aaKnown RBP22.03■■□□□ 1.12
CHMP1A-203ENST00000547614 CHST13Q8NET6 341 aa22.03■■□□□ 1.12
CHMP1A-203ENST00000547614 PRO3102Q9H379 93 aa22.03■■□□□ 1.12
CHMP1A-203ENST00000547614 FRMPD3Q5JV73 1810 aa22.02■■□□□ 1.12
CHMP1A-203ENST00000547614 DNM1LO00429 736 aa22.02■■□□□ 1.12
CHMP1A-203ENST00000547614 NT5C2P49902 561 aa22.02■■□□□ 1.12
CHMP1A-203ENST00000547614 HAND2P61296 217 aa22.02■■□□□ 1.12
CHMP1A-203ENST00000547614 RRP12Q5JTH9 1297 aaKnown RBP22.02■■□□□ 1.12
CHMP1A-203ENST00000547614 PRAMEF19Q5SWL8 479 aa22.02■■□□□ 1.12
CHMP1A-203ENST00000547614 RNF41Q9H4P4 317 aaPredicted RBP22.02■■□□□ 1.12
CHMP1A-203ENST00000547614 ISY1Q9ULR0 285 aaKnown RBP22.02■■□□□ 1.12
CHMP1A-203ENST00000547614 TOP1P11387 765 aaKnown RBP22.01■■□□□ 1.11
CHMP1A-203ENST00000547614 SLC4A3P48751 1232 aa22.01■■□□□ 1.11
CHMP1A-203ENST00000547614 IKQ13123 557 aaPredicted RBP22.01■■□□□ 1.11
CHMP1A-203ENST00000547614 C7orf61Q8IZ16 206 aa22.01■■□□□ 1.11
CHMP1A-203ENST00000547614 TTC14Q96N46 770 aa22.01■■□□□ 1.11
CHMP1A-203ENST00000547614 RBM27Q9P2N5 1060 aaKnown RBP22.01■■□□□ 1.11
CHMP1A-203ENST00000547614 TRIOBPQ9H2D6 2365 aa22.01■■□□□ 1.11
CHMP1A-203ENST00000547614 PLXNA1Q9UIW2 1896 aa22■■□□□ 1.11
CHMP1A-203ENST00000547614 ZNF213O14771 459 aa22■■□□□ 1.11
CHMP1A-203ENST00000547614 MAMDC4Q6UXC1 1216 aa22■■□□□ 1.11
CHMP1A-203ENST00000547614 KCTD1Q719H9 257 aa22■■□□□ 1.11
CHMP1A-203ENST00000547614 ZNF467Q7Z7K2 595 aaPredicted RBP22■■□□□ 1.11
CHMP1A-203ENST00000547614 DCAF4Q8WV16 495 aa22■■□□□ 1.11
CHMP1A-203ENST00000547614 DSCC1Q9BVC3 393 aa22■■□□□ 1.11
CHMP1A-203ENST00000547614 PDE4AP27815 886 aa21.99■■□□□ 1.11
CHMP1A-203ENST00000547614 FXR1P51114 621 aaKnown RBP eCLIP21.99■■□□□ 1.11
CHMP1A-203ENST00000547614 TKFCQ3LXA3 575 aa21.99■■□□□ 1.11
CHMP1A-203ENST00000547614 ANKRD35Q8N283 1001 aa21.99■■□□□ 1.11
CHMP1A-203ENST00000547614 TMEM47Q9BQJ4 181 aa21.99■■□□□ 1.11
CHMP1A-203ENST00000547614 SENP6Q9GZR1 1112 aaPredicted RBP21.99■■□□□ 1.11
CHMP1A-203ENST00000547614 CNPY2Q9Y2B0 182 aa21.99■■□□□ 1.11
CHMP1A-203ENST00000547614 ZNF536O15090 1300 aa21.99■■□□□ 1.11
CHMP1A-203ENST00000547614 SYNGAP1Q96PV0 1343 aa21.99■■□□□ 1.11
CHMP1A-203ENST00000547614 A0A1W2PPC1 479 aa21.98■■□□□ 1.11
CHMP1A-203ENST00000547614 IRX6P78412 446 aaPredicted RBP21.98■■□□□ 1.11
CHMP1A-203ENST00000547614 LRRC26Q2I0M4 334 aa21.98■■□□□ 1.11
CHMP1A-203ENST00000547614 TBC1D10CQ8IV04 446 aa21.98■■□□□ 1.11
CHMP1A-203ENST00000547614 ESR2Q92731 530 aa21.98■■□□□ 1.11
CHMP1A-203ENST00000547614 PRR12Q9ULL5 1215 aa21.98■■□□□ 1.11
CHMP1A-203ENST00000547614 RANBP2P49792 3224 aaKnown RBP21.98■■□□□ 1.11
CHMP1A-203ENST00000547614 KBTBD13C9JR72 458 aa21.97■■□□□ 1.11
CHMP1A-203ENST00000547614 ZNF865P0CJ78 1059 aaPredicted RBP21.97■■□□□ 1.11
CHMP1A-203ENST00000547614 GJC2Q5T442 439 aaPredicted RBP21.97■■□□□ 1.11
CHMP1A-203ENST00000547614 TTC22Q5TAA0 569 aa21.97■■□□□ 1.11
CHMP1A-203ENST00000547614 ANO1Q5XXA6 986 aa21.97■■□□□ 1.11
CHMP1A-203ENST00000547614 BTNL9Q6UXG8 535 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms