RNA–Protein interactions for RNA: ENST00000547381.1

SSH1-206, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-206ENST00000547381 MFSD6Q6ZSS7 791 aa14.66□□□□□ -0.06
SSH1-206ENST00000547381 CHURC1Q8WUH1 139 aa14.66□□□□□ -0.06
SSH1-206ENST00000547381 KIFC2Q96AC6 838 aa14.66□□□□□ -0.06
SSH1-206ENST00000547381 PAWRQ96IZ0 340 aaKnown RBP14.66□□□□□ -0.06
SSH1-206ENST00000547381 MMP19Q99542 508 aa14.66□□□□□ -0.06
SSH1-206ENST00000547381 NBPF3Q9H094 633 aa14.66□□□□□ -0.06
SSH1-206ENST00000547381 RNF41Q9H4P4 317 aaPredicted RBP14.66□□□□□ -0.06
SSH1-206ENST00000547381 SLC38A10Q9HBR0 1119 aa14.66□□□□□ -0.06
SSH1-206ENST00000547381 IL17RBQ9NRM6 502 aa14.66□□□□□ -0.06
SSH1-206ENST00000547381 NR2E3Q9Y5X4 410 aa14.66□□□□□ -0.06
SSH1-206ENST00000547381 COL11A1P12107 1806 aaPredicted RBP14.66□□□□□ -0.06
SSH1-206ENST00000547381 ZNF213O14771 459 aa14.65□□□□□ -0.06
SSH1-206ENST00000547381 PLA2G6O60733 806 aa14.65□□□□□ -0.06
SSH1-206ENST00000547381 IGHA2P01877 340 aa14.65□□□□□ -0.06
SSH1-206ENST00000547381 CYP2C19P33261 490 aa14.65□□□□□ -0.06
SSH1-206ENST00000547381 STAT2P52630 851 aa14.65□□□□□ -0.06
SSH1-206ENST00000547381 RRP12Q5JTH9 1297 aaKnown RBP14.65□□□□□ -0.06
SSH1-206ENST00000547381 AKNAD1Q5T1N1 836 aa14.65□□□□□ -0.06
SSH1-206ENST00000547381 LHX8Q68G74 356 aa14.65□□□□□ -0.06
SSH1-206ENST00000547381 SNRNP48Q6IEG0 339 aaKnown RBP14.65□□□□□ -0.06
SSH1-206ENST00000547381 FAM160B2Q86V87 743 aa14.65□□□□□ -0.06
SSH1-206ENST00000547381 TCP11L1Q9NUJ3 509 aa14.65□□□□□ -0.06
SSH1-206ENST00000547381 ISY1Q9ULR0 285 aaKnown RBP14.65□□□□□ -0.06
SSH1-206ENST00000547381 DIS3Q9Y2L1 958 aaKnown RBP14.65□□□□□ -0.06
SSH1-206ENST00000547381 TMEM232C9JQI7 657 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 NMT2O60551 498 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 MCCP23508 829 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 PDE4AP27815 886 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 CNGA1P29973 690 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 HAND2P61296 217 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 TTC22Q5TAA0 569 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 RCSD1Q6JBY9 416 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 STAG1Q8WVM7 1258 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 MAML3Q96JK9 1138 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 TTC14Q96N46 770 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 DSCC1Q9BVC3 393 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 DDX20Q9UHI6 824 aaKnown RBP14.64□□□□□ -0.07
SSH1-206ENST00000547381 CTNNA3Q9UI47 895 aa14.64□□□□□ -0.07
SSH1-206ENST00000547381 H0YGN5 161 aa14.63□□□□□ -0.07
SSH1-206ENST00000547381 EVI5O60447 810 aa14.63□□□□□ -0.07
SSH1-206ENST00000547381 TOP1P11387 765 aaKnown RBP14.63□□□□□ -0.07
SSH1-206ENST00000547381 IKQ13123 557 aaPredicted RBP14.63□□□□□ -0.07
SSH1-206ENST00000547381 CPXCR1Q8N123 301 aa14.63□□□□□ -0.07
SSH1-206ENST00000547381 DCAF4Q8WV16 495 aa14.63□□□□□ -0.07
SSH1-206ENST00000547381 ESR2Q92731 530 aa14.63□□□□□ -0.07
SSH1-206ENST00000547381 C11orf49Q9H6J7 331 aa14.63□□□□□ -0.07
SSH1-206ENST00000547381 FBXO40Q9UH90 709 aa14.63□□□□□ -0.07
SSH1-206ENST00000547381 NRBP1Q9UHY1 535 aa14.63□□□□□ -0.07
SSH1-206ENST00000547381 TACC3Q9Y6A5 838 aa14.63□□□□□ -0.07
SSH1-206ENST00000547381 CYBAP13498 195 aa14.62□□□□□ -0.07
SSH1-206ENST00000547381 MNX1P50219 401 aaPredicted RBP14.62□□□□□ -0.07
SSH1-206ENST00000547381 IMMTQ16891 758 aaKnown RBP14.62□□□□□ -0.07
SSH1-206ENST00000547381 ZNF792Q3KQV3 632 aa14.62□□□□□ -0.07
SSH1-206ENST00000547381 CHST13Q8NET6 341 aa14.62□□□□□ -0.07
SSH1-206ENST00000547381 DIS3LQ8TF46 1054 aaKnown RBP14.62□□□□□ -0.07
SSH1-206ENST00000547381 RUFY2Q8WXA3 655 aa14.62□□□□□ -0.07
SSH1-206ENST00000547381 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
SSH1-206ENST00000547381 RIPK3Q9Y572 518 aa14.62□□□□□ -0.07
SSH1-206ENST00000547381 ZNFX1Q9P2E3 1918 aaKnown RBP14.62□□□□□ -0.07
SSH1-206ENST00000547381 SEPT4O43236 478 aa14.61□□□□□ -0.07
SSH1-206ENST00000547381 PGK2P07205 417 aa14.61□□□□□ -0.07
SSH1-206ENST00000547381 GSPT1P15170 499 aaKnown RBP14.61□□□□□ -0.07
SSH1-206ENST00000547381 SLC4A3P48751 1232 aa14.61□□□□□ -0.07
SSH1-206ENST00000547381 CCDC178Q5BJE1 867 aa14.61□□□□□ -0.07
SSH1-206ENST00000547381 KCTD1Q719H9 257 aa14.61□□□□□ -0.07
SSH1-206ENST00000547381 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.61□□□□□ -0.07
SSH1-206ENST00000547381 TBC1D10CQ8IV04 446 aa14.61□□□□□ -0.07
SSH1-206ENST00000547381 MSL3Q8N5Y2 521 aaKnown RBP14.61□□□□□ -0.07
SSH1-206ENST00000547381 TRPV1Q8NER1 839 aa14.61□□□□□ -0.07
SSH1-206ENST00000547381 TMEM47Q9BQJ4 181 aa14.61□□□□□ -0.07
SSH1-206ENST00000547381 TINF2Q9BSI4 451 aa14.61□□□□□ -0.07
SSH1-206ENST00000547381 RAVER2Q9HCJ3 691 aaKnown RBP14.61□□□□□ -0.07
SSH1-206ENST00000547381 RAD50Q92878 1312 aa14.61□□□□□ -0.07
SSH1-206ENST00000547381 CCDC96Q2M329 555 aa14.6□□□□□ -0.07
SSH1-206ENST00000547381 TKFCQ3LXA3 575 aa14.6□□□□□ -0.07
SSH1-206ENST00000547381 IQCA1Q86XH1 822 aa14.6□□□□□ -0.07
SSH1-206ENST00000547381 ANKRD35Q8N283 1001 aa14.6□□□□□ -0.07
SSH1-206ENST00000547381 DNAJC25-GNG10A0A024R161 153 aa14.59□□□□□ -0.07
SSH1-206ENST00000547381 COL6A1P12109 1028 aa14.59□□□□□ -0.07
SSH1-206ENST00000547381 ZNF467Q7Z7K2 595 aaPredicted RBP14.59□□□□□ -0.07
SSH1-206ENST00000547381 DGKHQ86XP1 1220 aa14.59□□□□□ -0.07
SSH1-206ENST00000547381 ARRDC4Q8NCT1 418 aa14.59□□□□□ -0.07
SSH1-206ENST00000547381 CHMP4CQ96CF2 233 aa14.59□□□□□ -0.07
SSH1-206ENST00000547381 KRT23Q9C075 422 aa14.59□□□□□ -0.07
SSH1-206ENST00000547381 CNNM2Q9H8M5 875 aa14.59□□□□□ -0.07
SSH1-206ENST00000547381 PRR12Q9ULL5 1215 aa14.59□□□□□ -0.07
SSH1-206ENST00000547381 MTMR7Q9Y216 660 aa14.59□□□□□ -0.07
SSH1-206ENST00000547381 CNPY2Q9Y2B0 182 aa14.59□□□□□ -0.07
SSH1-206ENST00000547381 LAMA2P24043 3122 aaKnown RBP14.58□□□□□ -0.08
SSH1-206ENST00000547381 LAMA4Q16363 1823 aa14.58□□□□□ -0.08
SSH1-206ENST00000547381 DNM1LO00429 736 aa14.58□□□□□ -0.08
SSH1-206ENST00000547381 MAMDC4Q6UXC1 1216 aa14.58□□□□□ -0.08
SSH1-206ENST00000547381 BTNL9Q6UXG8 535 aa14.58□□□□□ -0.08
SSH1-206ENST00000547381 ACAD9Q9H845 621 aa14.58□□□□□ -0.08
SSH1-206ENST00000547381 PNMA2Q9UL42 364 aa14.58□□□□□ -0.08
SSH1-206ENST00000547381 PLXNA1Q9UIW2 1896 aa14.58□□□□□ -0.08
SSH1-206ENST00000547381 NEDD4P46934 1319 aa14.58□□□□□ -0.08
SSH1-206ENST00000547381 SYNGAP1Q96PV0 1343 aa14.58□□□□□ -0.08
SSH1-206ENST00000547381 KDM4AO75164 1064 aa14.57□□□□□ -0.08
SSH1-206ENST00000547381 PDHBP11177 359 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms