RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 IQCA1Q86XH1 822 aa12.87□□□□□ -0.35
GCN1-202ENST00000547263 RAET1EQ8TD07 263 aa12.87□□□□□ -0.35
GCN1-202ENST00000547263 SH3TC2Q8TF17 1288 aa12.87□□□□□ -0.35
GCN1-202ENST00000547263 TOMM22Q9NS69 142 aa12.87□□□□□ -0.35
GCN1-202ENST00000547263 TNKSO95271 1327 aa12.87□□□□□ -0.35
GCN1-202ENST00000547263 SMCHD1A6NHR9 2005 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 CCDC85CA6NKD9 419 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 TMEM232C9JQI7 657 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 SLC27A2O14975 620 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 STAT3P40763 770 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 RGS2P41220 211 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 ANTXR2P58335 489 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 CREB3L3Q68CJ9 461 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 KIAA1211Q6ZU35 1233 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 TRMT44Q8IYL2 757 aaKnown RBP12.86□□□□□ -0.35
GCN1-202ENST00000547263 CHURC1Q8WUH1 139 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 TRIB2Q92519 343 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 APBA2Q99767 749 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 ZKSCAN3Q9BRR0 538 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 TEX13BQ9BXU2 312 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 RANBP17Q9H2T7 1088 aaKnown RBP12.86□□□□□ -0.35
GCN1-202ENST00000547263 KIAA0100Q14667 2235 aaKnown RBP12.86□□□□□ -0.35
GCN1-202ENST00000547263 LCTP09848 1927 aa12.86□□□□□ -0.35
GCN1-202ENST00000547263 FRMPD3Q5JV73 1810 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 DNAJC25-GNG10A0A024R161 153 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 HMGCRP04035 888 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 CAPN2P17655 700 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 COL9A3Q14050 684 aaPredicted RBP12.85□□□□□ -0.35
GCN1-202ENST00000547263 MTFR1Q15390 333 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 GPATCH4Q5T3I0 446 aaKnown RBP12.85□□□□□ -0.35
GCN1-202ENST00000547263 KCTD1Q719H9 257 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 PNMA1Q8ND90 353 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 PAK6Q9NQU5 681 aaPredicted RBP12.85□□□□□ -0.35
GCN1-202ENST00000547263 PRR12Q9ULL5 1215 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 RIPK3Q9Y572 518 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 CENPFP49454 3210 aa12.85□□□□□ -0.35
GCN1-202ENST00000547263 POTEFA5A3E0 1075 aa12.84□□□□□ -0.35
GCN1-202ENST00000547263 COBLO75128 1261 aa12.84□□□□□ -0.35
GCN1-202ENST00000547263 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
GCN1-202ENST00000547263 INHAP05111 366 aa12.84□□□□□ -0.35
GCN1-202ENST00000547263 ELNP15502 786 aa12.84□□□□□ -0.35
GCN1-202ENST00000547263 ADORA2AP29274 412 aa12.84□□□□□ -0.35
GCN1-202ENST00000547263 OLFML2BQ68BL8 750 aa12.84□□□□□ -0.35
GCN1-202ENST00000547263 TTBK2Q6IQ55 1244 aa12.84□□□□□ -0.35
GCN1-202ENST00000547263 NPLOC4Q8TAT6 608 aa12.84□□□□□ -0.35
GCN1-202ENST00000547263 ANO2Q9NQ90 1003 aa12.84□□□□□ -0.35
GCN1-202ENST00000547263 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
GCN1-202ENST00000547263 ZBED4O75132 1171 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 GJB1P08034 283 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 UBXN2AP68543 259 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 TROAPQ12815 778 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 TRDNQ13061 729 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 CCL14Q16627 93 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 ZNF792Q3KQV3 632 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 CASC1Q6TDU7 716 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 CHST13Q8NET6 341 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 KIFC2Q96AC6 838 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 SHISA4Q96DD7 197 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 MTMR8Q96EF0 704 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 CRISPLD2Q9H0B8 497 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 FLRT1Q9NZU1 646 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 WDR19Q8NEZ3 1342 aa12.83□□□□□ -0.36
GCN1-202ENST00000547263 PALM3A6NDB9 673 aaPredicted RBP12.82□□□□□ -0.36
GCN1-202ENST00000547263 RAD21O60216 631 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 ICAM1P05362 532 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 CCL5P13501 91 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 CYP2B6P20813 491 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 HSPA4P34932 840 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 GJA8P48165 433 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 SOX10P56693 466 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 TRIM32Q13049 653 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 TKFCQ3LXA3 575 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 ASPRV1Q53RT3 343 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 SYDE2Q5VT97 1194 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 SNRNP48Q6IEG0 339 aaKnown RBP12.82□□□□□ -0.36
GCN1-202ENST00000547263 UBE2Q1Q7Z7E8 422 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 NCAPG2Q86XI2 1143 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 RASEFQ8IZ41 740 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 MAP3K14Q99558 947 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 UBAC1Q9BSL1 405 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 KAT14Q9H8E8 782 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 SENP2Q9HC62 589 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 RAVER2Q9HCJ3 691 aaKnown RBP12.82□□□□□ -0.36
GCN1-202ENST00000547263 IVNS1ABPQ9Y6Y0 642 aa12.82□□□□□ -0.36
GCN1-202ENST00000547263 FCER1AP12319 257 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 LIFRP42702 1097 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 EXOSC10Q01780 885 aaKnown RBP12.81□□□□□ -0.36
GCN1-202ENST00000547263 CACNB2Q08289 660 aaPredicted RBP12.81□□□□□ -0.36
GCN1-202ENST00000547263 PLS1Q14651 629 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 SLC35G1Q2M3R5 365 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 IFIT1BQ5T764 474 aaKnown RBP12.81□□□□□ -0.36
GCN1-202ENST00000547263 MAMDC4Q6UXC1 1216 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 RALYLQ86SE5 291 aaKnown RBP12.81□□□□□ -0.36
GCN1-202ENST00000547263 CCAR1Q8IX12 1150 aaKnown RBP12.81□□□□□ -0.36
GCN1-202ENST00000547263 MAML3Q96JK9 1138 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 TMEM87BQ96K49 555 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 FGD4Q96M96 766 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 MAF1Q9H063 256 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms