RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 DUSP11O75319 330 aaKnown RBP28.7■■■□□ 2.18
PRDM4-202ENST00000547188 SNAI1O95863 264 aaPredicted RBP28.7■■■□□ 2.18
PRDM4-202ENST00000547188 CST5P28325 142 aaPredicted RBP28.7■■■□□ 2.18
PRDM4-202ENST00000547188 NHLH1Q02575 133 aa28.7■■■□□ 2.18
PRDM4-202ENST00000547188 EVX2Q03828 476 aa28.7■■■□□ 2.18
PRDM4-202ENST00000547188 PCSK9Q8NBP7 692 aaKnown RBP28.7■■■□□ 2.18
PRDM4-202ENST00000547188 HDAC5Q9UQL6 1122 aa28.7■■■□□ 2.18
PRDM4-202ENST00000547188 CA3P07451 260 aa28.69■■■□□ 2.18
PRDM4-202ENST00000547188 ATP2A2P16615 1042 aaKnown RBP28.68■■■□□ 2.18
PRDM4-202ENST00000547188 ZAP70P43403 619 aa28.68■■■□□ 2.18
PRDM4-202ENST00000547188 CLEC10AQ8IUN9 316 aa28.68■■■□□ 2.18
PRDM4-202ENST00000547188 GNASQ5JWF2 1037 aa28.67■■■□□ 2.18
PRDM4-202ENST00000547188 RIOX2Q8IUF8 465 aa28.67■■■□□ 2.18
PRDM4-202ENST00000547188 MYH8P13535 1937 aa28.67■■■□□ 2.18
PRDM4-202ENST00000547188 NAV1Q8NEY1 1877 aa28.66■■■□□ 2.18
PRDM4-202ENST00000547188 TMEM67Q5HYA8 995 aa28.66■■■□□ 2.18
PRDM4-202ENST00000547188 FBXO28Q9NVF7 368 aa28.66■■■□□ 2.18
PRDM4-202ENST00000547188 ARNTL2Q8WYA1 636 aa28.65■■■□□ 2.18
PRDM4-202ENST00000547188 DBNDD2Q9BQY9 259 aa28.65■■■□□ 2.18
PRDM4-202ENST00000547188 WNT8AQ9H1J5 351 aa28.65■■■□□ 2.18
PRDM4-202ENST00000547188 SCN5AQ14524 2016 aa28.64■■■□□ 2.18
PRDM4-202ENST00000547188 POLR3DP05423 398 aaPredicted RBP28.64■■■□□ 2.18
PRDM4-202ENST00000547188 STAT3P40763 770 aa28.64■■■□□ 2.18
PRDM4-202ENST00000547188 VWCEQ96DN2 955 aa28.64■■■□□ 2.18
PRDM4-202ENST00000547188 SCLYQ96I15 445 aa28.64■■■□□ 2.18
PRDM4-202ENST00000547188 UPF3AQ9H1J1 476 aaKnown RBP28.64■■■□□ 2.18
PRDM4-202ENST00000547188 SPC25Q9HBM1 224 aa28.64■■■□□ 2.18
PRDM4-202ENST00000547188 SMC4Q9NTJ3 1288 aa28.64■■■□□ 2.18
PRDM4-202ENST00000547188 ARHGEF15O94989 841 aa28.63■■■□□ 2.17
PRDM4-202ENST00000547188 GJA9P57773 515 aa28.63■■■□□ 2.17
PRDM4-202ENST00000547188 BEX3Q00994 111 aa28.63■■■□□ 2.17
PRDM4-202ENST00000547188 GABPAQ06546 454 aa28.63■■■□□ 2.17
PRDM4-202ENST00000547188 SIAH1Q8IUQ4 282 aa28.63■■■□□ 2.17
PRDM4-202ENST00000547188 FBXL18Q96ME1 805 aa28.63■■■□□ 2.17
PRDM4-202ENST00000547188 NOC4LQ9BVI4 516 aaKnown RBP28.63■■■□□ 2.17
PRDM4-202ENST00000547188 ADAMTS5Q9UNA0 930 aa28.63■■■□□ 2.17
PRDM4-202ENST00000547188 WDFY4Q6ZS81 3184 aa28.63■■■□□ 2.17
PRDM4-202ENST00000547188 IDH1O75874 414 aaKnown RBP28.62■■■□□ 2.17
PRDM4-202ENST00000547188 G3BP1Q13283 466 aaKnown RBP eCLIP28.62■■■□□ 2.17
PRDM4-202ENST00000547188 ACVR2BQ13705 512 aa28.62■■■□□ 2.17
PRDM4-202ENST00000547188 TTLL4Q14679 1199 aa28.62■■■□□ 2.17
PRDM4-202ENST00000547188 CCDC158Q5M9N0 1113 aa28.62■■■□□ 2.17
PRDM4-202ENST00000547188 COL4A4P53420 1690 aaPredicted RBP28.61■■■□□ 2.17
PRDM4-202ENST00000547188 CTAGE5O15320 804 aa28.61■■■□□ 2.17
PRDM4-202ENST00000547188 MTX1Q13505 466 aa28.61■■■□□ 2.17
PRDM4-202ENST00000547188 CCDC144BQ3MJ40 725 aa28.61■■■□□ 2.17
PRDM4-202ENST00000547188 RPUSD2Q8IZ73 545 aaKnown RBP28.61■■■□□ 2.17
PRDM4-202ENST00000547188 MSL3Q8N5Y2 521 aaKnown RBP28.61■■■□□ 2.17
PRDM4-202ENST00000547188 MAGEB6Q8N7X4 407 aa28.61■■■□□ 2.17
PRDM4-202ENST00000547188 TRPV6Q9H1D0 765 aa28.61■■■□□ 2.17
PRDM4-202ENST00000547188 VCPKMTQ9H867 229 aa28.61■■■□□ 2.17
PRDM4-202ENST00000547188 ZNF214Q9UL59 606 aaPredicted RBP28.6■■■□□ 2.17
PRDM4-202ENST00000547188 NOB1Q9ULX3 412 aaKnown RBP28.6■■■□□ 2.17
PRDM4-202ENST00000547188 VWA5AO00534 786 aa28.59■■■□□ 2.17
PRDM4-202ENST00000547188 WDR46O15213 610 aaKnown RBP28.59■■■□□ 2.17
PRDM4-202ENST00000547188 GRB10Q13322 594 aa28.59■■■□□ 2.17
PRDM4-202ENST00000547188 CXCL17Q6UXB2 119 aa28.59■■■□□ 2.17
PRDM4-202ENST00000547188 MAMDC4Q6UXC1 1216 aa28.59■■■□□ 2.17
PRDM4-202ENST00000547188 TMEM179Q6ZVK1 233 aa28.59■■■□□ 2.17
PRDM4-202ENST00000547188 GJD3Q8N144 294 aa28.59■■■□□ 2.17
PRDM4-202ENST00000547188 SLC43A3Q8NBI5 491 aa28.59■■■□□ 2.17
PRDM4-202ENST00000547188 ARHGEF10LQ9HCE6 1279 aa28.59■■■□□ 2.17
PRDM4-202ENST00000547188 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.59■■■□□ 2.17
PRDM4-202ENST00000547188 TMX2Q9Y320 296 aa28.59■■■□□ 2.17
PRDM4-202ENST00000547188 TAP1Q03518 808 aa28.58■■■□□ 2.17
PRDM4-202ENST00000547188 CSPP1Q1MSJ5 1256 aa28.58■■■□□ 2.17
PRDM4-202ENST00000547188 ALDH1L2Q3SY69 923 aa28.58■■■□□ 2.17
PRDM4-202ENST00000547188 SPRED2Q7Z698 418 aa28.58■■■□□ 2.17
PRDM4-202ENST00000547188 DDX11Q96FC9 970 aa28.58■■■□□ 2.17
PRDM4-202ENST00000547188 TNNI3KQ59H18 835 aa28.57■■■□□ 2.16
PRDM4-202ENST00000547188 REPS2Q8NFH8 660 aa28.57■■■□□ 2.16
PRDM4-202ENST00000547188 FPGT-TNNI3KV9GXZ4 949 aa28.57■■■□□ 2.16
PRDM4-202ENST00000547188 GRIN2DO15399 1336 aa28.56■■■□□ 2.16
PRDM4-202ENST00000547188 B4GALT4O60513 344 aa28.56■■■□□ 2.16
PRDM4-202ENST00000547188 SSTR3P32745 418 aaPredicted RBP28.56■■■□□ 2.16
PRDM4-202ENST00000547188 ICA1Q05084 483 aa28.56■■■□□ 2.16
PRDM4-202ENST00000547188 ITGA7Q13683 1181 aa28.56■■■□□ 2.16
PRDM4-202ENST00000547188 DEFB128Q7Z7B8 93 aa28.56■■■□□ 2.16
PRDM4-202ENST00000547188 CERS3Q8IU89 383 aa28.56■■■□□ 2.16
PRDM4-202ENST00000547188 PNMA6EA0A0J9YXQ4 647 aa28.55■■■□□ 2.16
PRDM4-202ENST00000547188 LPXNO60711 386 aa28.55■■■□□ 2.16
PRDM4-202ENST00000547188 AKR1B1P15121 316 aa28.55■■■□□ 2.16
PRDM4-202ENST00000547188 FAM178BQ8IXR5 827 aa28.55■■■□□ 2.16
PRDM4-202ENST00000547188 AGBL1Q96MI9 1066 aa28.55■■■□□ 2.16
PRDM4-202ENST00000547188 MCM9Q9NXL9 1143 aa28.55■■■□□ 2.16
PRDM4-202ENST00000547188 PPP1R9AQ9ULJ8 1098 aa28.55■■■□□ 2.16
PRDM4-202ENST00000547188 DNAJC25-GNG10A0A024R161 153 aa28.54■■■□□ 2.16
PRDM4-202ENST00000547188 IGSF3O75054 1194 aa28.54■■■□□ 2.16
PRDM4-202ENST00000547188 CYP2D6P10635 497 aa28.54■■■□□ 2.16
PRDM4-202ENST00000547188 COPB2P35606 906 aa28.54■■■□□ 2.16
PRDM4-202ENST00000547188 SLC4A3P48751 1232 aa28.54■■■□□ 2.16
PRDM4-202ENST00000547188 ABHD16BQ9H3Z7 469 aa28.54■■■□□ 2.16
PRDM4-202ENST00000547188 RIPK3Q9Y572 518 aa28.54■■■□□ 2.16
PRDM4-202ENST00000547188 ZNF318Q5VUA4 2279 aa28.54■■■□□ 2.16
PRDM4-202ENST00000547188 ASTN1O14525 1302 aa28.53■■■□□ 2.16
PRDM4-202ENST00000547188 DYNLL2Q96FJ2 89 aa28.53■■■□□ 2.16
PRDM4-202ENST00000547188 SH2D4AQ9H788 454 aa28.53■■■□□ 2.16
PRDM4-202ENST00000547188 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.52■■■□□ 2.16
PRDM4-202ENST00000547188 GNAI3P08754 354 aa28.52■■■□□ 2.16
PRDM4-202ENST00000547188 PTGS1P23219 599 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms