RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 CC2D2BQ6DHV5 1058 aa21.2■□□□□ 0.99
VDR-204ENST00000547065 KRT25Q7Z3Z0 450 aa21.2■□□□□ 0.99
VDR-204ENST00000547065 ZNF713Q8N859 430 aaPredicted RBP21.2■□□□□ 0.99
VDR-204ENST00000547065 RASGRP4Q8TDF6 673 aa21.2■□□□□ 0.99
VDR-204ENST00000547065 RGPD3A6NKT7 1758 aaPredicted RBP21.2■□□□□ 0.98
VDR-204ENST00000547065 RGPD4Q7Z3J3 1758 aa21.2■□□□□ 0.98
VDR-204ENST00000547065 SMCO2A6NFE2 343 aa21.2■□□□□ 0.98
VDR-204ENST00000547065 SNHG28P0DPA3 235 aa21.2■□□□□ 0.98
VDR-204ENST00000547065 FILIP1Q7Z7B0 1213 aa21.2■□□□□ 0.98
VDR-204ENST00000547065 C7orf43Q8WVR3 580 aa21.2■□□□□ 0.98
VDR-204ENST00000547065 CCDC17Q96LX7 622 aa21.2■□□□□ 0.98
VDR-204ENST00000547065 CAMKK2Q96RR4 588 aa21.2■□□□□ 0.98
VDR-204ENST00000547065 DHX36Q9H2U1 1008 aaKnown RBP21.2■□□□□ 0.98
VDR-204ENST00000547065 CPVLQ9H3G5 476 aa21.2■□□□□ 0.98
VDR-204ENST00000547065 VAT1LQ9HCJ6 419 aa21.2■□□□□ 0.98
VDR-204ENST00000547065 LAD1O00515 517 aa21.19■□□□□ 0.98
VDR-204ENST00000547065 CHRNA5P30532 468 aa21.19■□□□□ 0.98
VDR-204ENST00000547065 RASGRP2Q7LDG7 609 aa21.19■□□□□ 0.98
VDR-204ENST00000547065 ENOX1Q8TC92 643 aaKnown RBP21.19■□□□□ 0.98
VDR-204ENST00000547065 GSDMAQ96QA5 445 aa21.19■□□□□ 0.98
VDR-204ENST00000547065 PIGSQ96S52 555 aa21.19■□□□□ 0.98
VDR-204ENST00000547065 ANO8Q9HCE9 1232 aaPredicted RBP21.19■□□□□ 0.98
VDR-204ENST00000547065 TNS1Q9HBL0 1735 aaKnown RBP21.18■□□□□ 0.98
VDR-204ENST00000547065 C10orf71Q711Q0 1435 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 NPM3O75607 178 aaKnown RBP21.18■□□□□ 0.98
VDR-204ENST00000547065 ERCC5P28715 1186 aaPredicted RBP21.18■□□□□ 0.98
VDR-204ENST00000547065 AFMP43652 599 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 EZH2Q15910 746 aaKnown RBP21.18■□□□□ 0.98
VDR-204ENST00000547065 E2F4Q16254 413 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 INF2Q27J81 1249 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 DTHD1Q6ZMT9 781 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 HOMER1Q86YM7 354 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 KIAA0825Q8IV33 1275 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 SUPT20HQ8NEM7 779 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 UBA5Q9GZZ9 404 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 FANCLQ9NW38 375 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 ZNF219Q9P2Y4 722 aaPredicted RBP21.18■□□□□ 0.98
VDR-204ENST00000547065 ESYT2A0FGR8 921 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 TXLNAP40222 546 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 NFIAQ12857 509 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 DPYDQ12882 1025 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 IDI2Q9BXS1 227 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 SERPINA10Q9UK55 444 aa21.18■□□□□ 0.98
VDR-204ENST00000547065 SERPINC1P01008 464 aa21.17■□□□□ 0.98
VDR-204ENST00000547065 ATP1A3P13637 1013 aa21.17■□□□□ 0.98
VDR-204ENST00000547065 UBASH3AP57075 661 aa21.17■□□□□ 0.98
VDR-204ENST00000547065 NONOQ15233 471 aaKnown RBP eCLIP21.17■□□□□ 0.98
VDR-204ENST00000547065 LRRC47Q8N1G4 583 aaKnown RBP21.17■□□□□ 0.98
VDR-204ENST00000547065 PRPHP41219 470 aa21.16■□□□□ 0.98
VDR-204ENST00000547065 RBM5P52756 815 aaKnown RBP eCLIP21.16■□□□□ 0.98
VDR-204ENST00000547065 FRMPD2Q68DX3 1309 aaPredicted RBP21.16■□□□□ 0.98
VDR-204ENST00000547065 EN1Q05925 392 aaPredicted RBP21.15■□□□□ 0.98
VDR-204ENST00000547065 ARID5BQ14865 1188 aa21.15■□□□□ 0.98
VDR-204ENST00000547065 PDXDC2PQ6P474 469 aa21.15■□□□□ 0.98
VDR-204ENST00000547065 TMC6Q7Z403 805 aa21.15■□□□□ 0.98
VDR-204ENST00000547065 ZFPM1Q8IX07 1006 aa21.15■□□□□ 0.98
VDR-204ENST00000547065 PI4KBQ9UBF8 816 aa21.15■□□□□ 0.98
VDR-204ENST00000547065 MPHOSPH10O00566 681 aaKnown RBP21.15■□□□□ 0.98
VDR-204ENST00000547065 EIF6P56537 245 aaKnown RBP21.15■□□□□ 0.98
VDR-204ENST00000547065 ZNF543Q08ER8 600 aa21.15■□□□□ 0.98
VDR-204ENST00000547065 ORC2Q13416 577 aaPredicted RBP21.15■□□□□ 0.98
VDR-204ENST00000547065 GRIPAP1Q4V328 841 aa21.15■□□□□ 0.98
VDR-204ENST00000547065 CCDC150Q8NCX0 1101 aa21.15■□□□□ 0.98
VDR-204ENST00000547065 SLX4Q8IY92 1834 aa21.14■□□□□ 0.98
VDR-204ENST00000547065 GTPBP6O43824 516 aaPredicted RBP21.14■□□□□ 0.97
VDR-204ENST00000547065 SKILP12757 684 aa21.14■□□□□ 0.97
VDR-204ENST00000547065 FMR1Q06787 632 aaKnown RBP eCLIP21.14■□□□□ 0.97
VDR-204ENST00000547065 AOC3Q16853 763 aa21.14■□□□□ 0.97
VDR-204ENST00000547065 GPATCH4Q5T3I0 446 aaKnown RBP21.14■□□□□ 0.97
VDR-204ENST00000547065 TMEM60Q9H2L4 133 aa21.14■□□□□ 0.97
VDR-204ENST00000547065 GPCPD1Q9NPB8 672 aa21.14■□□□□ 0.97
VDR-204ENST00000547065 PRIMPOLQ96LW4 560 aa21.13■□□□□ 0.97
VDR-204ENST00000547065 FAM198AQ9UFP1 575 aa21.13■□□□□ 0.97
VDR-204ENST00000547065 NFE2L3Q9Y4A8 694 aa21.13■□□□□ 0.97
VDR-204ENST00000547065 PNMA6FA0A0J9YX94 578 aa21.13■□□□□ 0.97
VDR-204ENST00000547065 ZNF18P17022 549 aa21.13■□□□□ 0.97
VDR-204ENST00000547065 CFAP100Q494V2 611 aa21.13■□□□□ 0.97
VDR-204ENST00000547065 NEK8Q86SG6 692 aa21.13■□□□□ 0.97
VDR-204ENST00000547065 REXO1Q8N1G1 1221 aaKnown RBP21.13■□□□□ 0.97
VDR-204ENST00000547065 CCSER1Q9C0I3 900 aa21.13■□□□□ 0.97
VDR-204ENST00000547065 RGS17Q9UGC6 210 aaPredicted RBP21.13■□□□□ 0.97
VDR-204ENST00000547065 CDK11BP21127 795 aaKnown RBP21.12■□□□□ 0.97
VDR-204ENST00000547065 CCZ1BP86790 482 aa21.12■□□□□ 0.97
VDR-204ENST00000547065 CCZ1P86791 482 aaPredicted RBP21.12■□□□□ 0.97
VDR-204ENST00000547065 TCP10Q12799 353 aa21.12■□□□□ 0.97
VDR-204ENST00000547065 PPP1R18Q6NYC8 613 aa21.12■□□□□ 0.97
VDR-204ENST00000547065 CLEC10AQ8IUN9 316 aa21.12■□□□□ 0.97
VDR-204ENST00000547065 DPF2Q92785 391 aa21.12■□□□□ 0.97
VDR-204ENST00000547065 MKL1Q969V6 931 aa21.12■□□□□ 0.97
VDR-204ENST00000547065 AK8Q96MA6 479 aa21.12■□□□□ 0.97
VDR-204ENST00000547065 JMJD4Q9H9V9 463 aa21.12■□□□□ 0.97
VDR-204ENST00000547065 PCDHAC2Q9Y5I4 1007 aa21.12■□□□□ 0.97
VDR-204ENST00000547065 UBA7P41226 1012 aa21.11■□□□□ 0.97
VDR-204ENST00000547065 STAT6P42226 847 aa21.11■□□□□ 0.97
VDR-204ENST00000547065 ADCY7P51828 1080 aa21.11■□□□□ 0.97
VDR-204ENST00000547065 LETM2Q2VYF4 491 aa21.11■□□□□ 0.97
VDR-204ENST00000547065 CERKLQ49MI3 558 aaPredicted RBP21.11■□□□□ 0.97
VDR-204ENST00000547065 POTEAQ6S8J7 498 aa21.11■□□□□ 0.97
VDR-204ENST00000547065 ADGRF4Q8IZF3 695 aa21.11■□□□□ 0.97
VDR-204ENST00000547065 TRIM34Q9BYJ4 488 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms