RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 KCTD2Q14681 263 aa31.3■■■□□ 2.6
SRSF9-202ENST00000546942 OLFML2BQ68BL8 750 aa31.3■■■□□ 2.6
SRSF9-202ENST00000546942 SNRNP48Q6IEG0 339 aaKnown RBP31.3■■■□□ 2.6
SRSF9-202ENST00000546942 TRPV1Q8NER1 839 aa31.3■■■□□ 2.6
SRSF9-202ENST00000546942 IL17RBQ9NRM6 502 aa31.3■■■□□ 2.6
SRSF9-202ENST00000546942 FEM1BQ9UK73 627 aa31.3■■■□□ 2.6
SRSF9-202ENST00000546942 COLQQ9Y215 455 aaPredicted RBP31.3■■■□□ 2.6
SRSF9-202ENST00000546942 FRMPD3Q5JV73 1810 aa31.3■■■□□ 2.6
SRSF9-202ENST00000546942 HABP4Q5JVS0 413 aaKnown RBP31.29■■■□□ 2.6
SRSF9-202ENST00000546942 CWC27Q6UX04 472 aaKnown RBP31.29■■■□□ 2.6
SRSF9-202ENST00000546942 SYNPO2Q9UMS6 1093 aa31.29■■■□□ 2.6
SRSF9-202ENST00000546942 MTMR7Q9Y216 660 aa31.29■■■□□ 2.6
SRSF9-202ENST00000546942 PLXNA1Q9UIW2 1896 aa31.29■■■□□ 2.6
SRSF9-202ENST00000546942 MFAP1P55081 439 aaKnown RBP31.28■■■□□ 2.6
SRSF9-202ENST00000546942 MAML3Q96JK9 1138 aa31.28■■■□□ 2.6
SRSF9-202ENST00000546942 TEX13BQ9BXU2 312 aa31.28■■■□□ 2.6
SRSF9-202ENST00000546942 DIAPH3Q9NSV4 1193 aa31.28■■■□□ 2.6
SRSF9-202ENST00000546942 DDX20Q9UHI6 824 aaKnown RBP31.28■■■□□ 2.6
SRSF9-202ENST00000546942 TMEM232C9JQI7 657 aa31.27■■■□□ 2.6
SRSF9-202ENST00000546942 CYBAP13498 195 aa31.27■■■□□ 2.6
SRSF9-202ENST00000546942 MCCP23508 829 aa31.27■■■□□ 2.6
SRSF9-202ENST00000546942 COPB2P35606 906 aa31.27■■■□□ 2.6
SRSF9-202ENST00000546942 IKQ13123 557 aaPredicted RBP31.27■■■□□ 2.6
SRSF9-202ENST00000546942 PPP4R3BQ5MIZ7 849 aa31.27■■■□□ 2.6
SRSF9-202ENST00000546942 PRAMEF19Q5SWL8 479 aa31.27■■■□□ 2.6
SRSF9-202ENST00000546942 RAVER2Q9HCJ3 691 aaKnown RBP31.27■■■□□ 2.6
SRSF9-202ENST00000546942 RIPK3Q9Y572 518 aa31.27■■■□□ 2.6
SRSF9-202ENST00000546942 ORC4O43929 436 aa31.26■■■□□ 2.59
SRSF9-202ENST00000546942 CHRDL2Q6WN34 429 aa31.26■■■□□ 2.59
SRSF9-202ENST00000546942 SLC34A2O95436 690 aa31.25■■■□□ 2.59
SRSF9-202ENST00000546942 IGHA2P01877 340 aa31.25■■■□□ 2.59
SRSF9-202ENST00000546942 SLC1A4P43007 532 aa31.25■■■□□ 2.59
SRSF9-202ENST00000546942 ANO1Q5XXA6 986 aa31.25■■■□□ 2.59
SRSF9-202ENST00000546942 SLC38A10Q9HBR0 1119 aa31.25■■■□□ 2.59
SRSF9-202ENST00000546942 FGRP09769 529 aa31.24■■■□□ 2.59
SRSF9-202ENST00000546942 PDE4AP27815 886 aa31.24■■■□□ 2.59
SRSF9-202ENST00000546942 KCTD1Q719H9 257 aa31.24■■■□□ 2.59
SRSF9-202ENST00000546942 C7orf61Q8IZ16 206 aa31.24■■■□□ 2.59
SRSF9-202ENST00000546942 ZMYM6O95789 1325 aa31.24■■■□□ 2.59
SRSF9-202ENST00000546942 MSCO60682 206 aa31.23■■■□□ 2.59
SRSF9-202ENST00000546942 STAT2P52630 851 aa31.23■■■□□ 2.59
SRSF9-202ENST00000546942 GMCL1Q96IK5 515 aa31.23■■■□□ 2.59
SRSF9-202ENST00000546942 HIP1O00291 1037 aa31.22■■■□□ 2.59
SRSF9-202ENST00000546942 MFSD6Q6ZSS7 791 aa31.22■■■□□ 2.59
SRSF9-202ENST00000546942 RASGRP2Q7LDG7 609 aa31.22■■■□□ 2.59
SRSF9-202ENST00000546942 CHURC1Q8WUH1 139 aa31.22■■■□□ 2.59
SRSF9-202ENST00000546942 DDX11Q96FC9 970 aa31.22■■■□□ 2.59
SRSF9-202ENST00000546942 DNAH12Q6ZR08 3092 aa31.22■■■□□ 2.59
SRSF9-202ENST00000546942 PFASO15067 1338 aa31.22■■■□□ 2.59
SRSF9-202ENST00000546942 ZNF792Q3KQV3 632 aa31.21■■■□□ 2.59
SRSF9-202ENST00000546942 STAG1Q8WVM7 1258 aa31.21■■■□□ 2.59
SRSF9-202ENST00000546942 HOMER2Q9NSB8 354 aa31.21■■■□□ 2.59
SRSF9-202ENST00000546942 ATP2A1O14983 1001 aa31.2■■■□□ 2.59
SRSF9-202ENST00000546942 MYCNP04198 464 aaPredicted RBP31.2■■■□□ 2.59
SRSF9-202ENST00000546942 AKNAD1Q5T1N1 836 aa31.2■■■□□ 2.59
SRSF9-202ENST00000546942 RCSD1Q6JBY9 416 aa31.2■■■□□ 2.59
SRSF9-202ENST00000546942 FAM160B2Q86V87 743 aa31.2■■■□□ 2.59
SRSF9-202ENST00000546942 TINF2Q9BSI4 451 aa31.2■■■□□ 2.59
SRSF9-202ENST00000546942 SNAP25P60880 206 aa31.19■■■□□ 2.58
SRSF9-202ENST00000546942 CCDC96Q2M329 555 aa31.19■■■□□ 2.58
SRSF9-202ENST00000546942 TBC1D10CQ8IV04 446 aa31.19■■■□□ 2.58
SRSF9-202ENST00000546942 SMCHD1A6NHR9 2005 aa31.19■■■□□ 2.58
SRSF9-202ENST00000546942 ZNF213O14771 459 aa31.18■■■□□ 2.58
SRSF9-202ENST00000546942 SEPT4O43236 478 aa31.18■■■□□ 2.58
SRSF9-202ENST00000546942 COL6A1P12109 1028 aa31.18■■■□□ 2.58
SRSF9-202ENST00000546942 ANKRD35Q8N283 1001 aa31.18■■■□□ 2.58
SRSF9-202ENST00000546942 SENP6Q9GZR1 1112 aaPredicted RBP31.18■■■□□ 2.58
SRSF9-202ENST00000546942 ZMYND8Q9ULU4 1186 aaPredicted RBP31.18■■■□□ 2.58
SRSF9-202ENST00000546942 DIS3Q9Y2L1 958 aaKnown RBP31.18■■■□□ 2.58
SRSF9-202ENST00000546942 OAZ1P54368 228 aa31.17■■■□□ 2.58
SRSF9-202ENST00000546942 GJC2Q5T442 439 aaPredicted RBP31.17■■■□□ 2.58
SRSF9-202ENST00000546942 TMEM47Q9BQJ4 181 aa31.17■■■□□ 2.58
SRSF9-202ENST00000546942 RBM27Q9P2N5 1060 aaKnown RBP31.17■■■□□ 2.58
SRSF9-202ENST00000546942 FDX1P10109 184 aa31.16■■■□□ 2.58
SRSF9-202ENST00000546942 TOP1P11387 765 aaKnown RBP31.16■■■□□ 2.58
SRSF9-202ENST00000546942 TAL1P17542 331 aaPredicted RBP31.16■■■□□ 2.58
SRSF9-202ENST00000546942 TTC22Q5TAA0 569 aa31.16■■■□□ 2.58
SRSF9-202ENST00000546942 CCDC174Q6PII3 467 aa31.16■■■□□ 2.58
SRSF9-202ENST00000546942 AGBL1Q96MI9 1066 aa31.16■■■□□ 2.58
SRSF9-202ENST00000546942 RNF41Q9H4P4 317 aaPredicted RBP31.16■■■□□ 2.58
SRSF9-202ENST00000546942 TRIOBPQ9H2D6 2365 aa31.16■■■□□ 2.58
SRSF9-202ENST00000546942 GSPT1P15170 499 aaKnown RBP31.15■■■□□ 2.58
SRSF9-202ENST00000546942 NOVP48745 357 aa31.15■■■□□ 2.58
SRSF9-202ENST00000546942 LRRC26Q2I0M4 334 aa31.15■■■□□ 2.58
SRSF9-202ENST00000546942 CHST13Q8NET6 341 aa31.15■■■□□ 2.58
SRSF9-202ENST00000546942 DCAF4Q8WV16 495 aa31.15■■■□□ 2.58
SRSF9-202ENST00000546942 TCP11L1Q9NUJ3 509 aa31.15■■■□□ 2.58
SRSF9-202ENST00000546942 FBXO40Q9UH90 709 aa31.15■■■□□ 2.58
SRSF9-202ENST00000546942 PRR12Q9ULL5 1215 aa31.15■■■□□ 2.58
SRSF9-202ENST00000546942 NEDD4P46934 1319 aa31.15■■■□□ 2.58
SRSF9-202ENST00000546942 SYN1P17600 705 aa31.14■■■□□ 2.58
SRSF9-202ENST00000546942 ARRDC4Q8NCT1 418 aa31.14■■■□□ 2.58
SRSF9-202ENST00000546942 ZKSCAN3Q9BRR0 538 aa31.14■■■□□ 2.58
SRSF9-202ENST00000546942 LAMA4Q16363 1823 aa31.14■■■□□ 2.58
SRSF9-202ENST00000546942 RANBP2P49792 3224 aaKnown RBP31.14■■■□□ 2.58
SRSF9-202ENST00000546942 DNM1LO00429 736 aa31.13■■■□□ 2.57
SRSF9-202ENST00000546942 PLA2G6O60733 806 aa31.13■■■□□ 2.57
SRSF9-202ENST00000546942 PCP11498 1178 aaKnown RBP31.13■■■□□ 2.57
SRSF9-202ENST00000546942 ESR2Q92731 530 aa31.13■■■□□ 2.57
SRSF9-202ENST00000546942 GPCPD1Q9NPB8 672 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms