RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 TEX13BQ9BXU2 312 aa22.25■■□□□ 1.15
CHERP-204ENST00000546538 DIS3Q9Y2L1 958 aaKnown RBP22.25■■□□□ 1.15
CHERP-204ENST00000546538 ATP2A1O14983 1001 aa22.24■■□□□ 1.15
CHERP-204ENST00000546538 ADCYAP1R1P41586 468 aa22.24■■□□□ 1.15
CHERP-204ENST00000546538 PPARAQ07869 468 aa22.24■■□□□ 1.15
CHERP-204ENST00000546538 ZNF444Q8N0Y2 327 aaPredicted RBP22.24■■□□□ 1.15
CHERP-204ENST00000546538 PRPF38AQ8NAV1 312 aaKnown RBP22.24■■□□□ 1.15
CHERP-204ENST00000546538 EYSQ5T1H1 3165 aa22.24■■□□□ 1.15
CHERP-204ENST00000546538 TRIM60Q495X7 471 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 VPS53Q5VIR6 699 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 RASGRP2Q7LDG7 609 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 GMCL1P1Q8NEA9 526 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 FERMT2Q96AC1 680 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 SLC38A10Q9HBR0 1119 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 RAVER2Q9HCJ3 691 aaKnown RBP22.23■■□□□ 1.15
CHERP-204ENST00000546538 NRBP1Q9UHY1 535 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 ATP11BQ9Y2G3 1177 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.23■■□□□ 1.15
CHERP-204ENST00000546538 UNC80Q8N2C7 3258 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 SNAI1O95863 264 aaPredicted RBP22.23■■□□□ 1.15
CHERP-204ENST00000546538 TTLL1O95922 423 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 PGK1P00558 417 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 MYCNP04198 464 aaPredicted RBP22.23■■□□□ 1.15
CHERP-204ENST00000546538 CPXCR1Q8N123 301 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 KIFC2Q96AC6 838 aa22.23■■□□□ 1.15
CHERP-204ENST00000546538 KBTBD13C9JR72 458 aa22.22■■□□□ 1.15
CHERP-204ENST00000546538 COPB2P35606 906 aa22.22■■□□□ 1.15
CHERP-204ENST00000546538 TFAP4Q01664 338 aa22.22■■□□□ 1.15
CHERP-204ENST00000546538 GPR153Q6NV75 609 aa22.22■■□□□ 1.15
CHERP-204ENST00000546538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.22■■□□□ 1.15
CHERP-204ENST00000546538 SH3RF1Q7Z6J0 888 aa22.22■■□□□ 1.15
CHERP-204ENST00000546538 NAPBQ9H115 298 aa22.22■■□□□ 1.15
CHERP-204ENST00000546538 XPNPEP3Q9NQH7 507 aa22.22■■□□□ 1.15
CHERP-204ENST00000546538 IL17RBQ9NRM6 502 aa22.22■■□□□ 1.15
CHERP-204ENST00000546538 SYNPO2Q9UMS6 1093 aa22.22■■□□□ 1.15
CHERP-204ENST00000546538 PHF24Q9UPV7 400 aa22.22■■□□□ 1.15
CHERP-204ENST00000546538 MCM3APO60318 1980 aa22.22■■□□□ 1.15
CHERP-204ENST00000546538 ADCY6O43306 1168 aa22.21■■□□□ 1.15
CHERP-204ENST00000546538 NMT2O60551 498 aa22.21■■□□□ 1.15
CHERP-204ENST00000546538 ADAMTS4O75173 837 aa22.21■■□□□ 1.15
CHERP-204ENST00000546538 CTDSPL2Q05D32 466 aa22.21■■□□□ 1.15
CHERP-204ENST00000546538 LRRFIP1Q32MZ4 808 aaKnown RBP22.21■■□□□ 1.15
CHERP-204ENST00000546538 ANKRD45Q5TZF3 282 aa22.21■■□□□ 1.15
CHERP-204ENST00000546538 NACAP1Q9BZK3 213 aa22.21■■□□□ 1.15
CHERP-204ENST00000546538 TSPY3P0CV98 308 aa22.2■■□□□ 1.14
CHERP-204ENST00000546538 TSPY8P0CW00 308 aa22.2■■□□□ 1.14
CHERP-204ENST00000546538 IRX5P78411 483 aaPredicted RBP22.2■■□□□ 1.14
CHERP-204ENST00000546538 SLFN13Q68D06 897 aa22.2■■□□□ 1.14
CHERP-204ENST00000546538 MAMDC4Q6UXC1 1216 aa22.2■■□□□ 1.14
CHERP-204ENST00000546538 DEFB123Q8N688 67 aa22.2■■□□□ 1.14
CHERP-204ENST00000546538 CHMP4CQ96CF2 233 aa22.2■■□□□ 1.14
CHERP-204ENST00000546538 ZNF287Q9HBT7 754 aa22.2■■□□□ 1.14
CHERP-204ENST00000546538 PDLIM7Q9NR12 457 aa22.2■■□□□ 1.14
CHERP-204ENST00000546538 FEM1BQ9UK73 627 aa22.2■■□□□ 1.14
CHERP-204ENST00000546538 ZNF536O15090 1300 aa22.2■■□□□ 1.14
CHERP-204ENST00000546538 TRIM43BA6NCK2 446 aa22.19■■□□□ 1.14
CHERP-204ENST00000546538 RARBP10826 455 aa22.19■■□□□ 1.14
CHERP-204ENST00000546538 ITGB8P26012 769 aa22.19■■□□□ 1.14
CHERP-204ENST00000546538 SLC4A3P48751 1232 aa22.19■■□□□ 1.14
CHERP-204ENST00000546538 PDE1AP54750 535 aa22.19■■□□□ 1.14
CHERP-204ENST00000546538 PDE4BQ07343 736 aa22.19■■□□□ 1.14
CHERP-204ENST00000546538 C1orf53Q5VUE5 145 aa22.19■■□□□ 1.14
CHERP-204ENST00000546538 TRIM43Q96BQ3 446 aaPredicted RBP22.19■■□□□ 1.14
CHERP-204ENST00000546538 ZBED4O75132 1171 aa22.18■■□□□ 1.14
CHERP-204ENST00000546538 BMP3P12645 472 aa22.18■■□□□ 1.14
CHERP-204ENST00000546538 HDAC1Q13547 482 aaPredicted RBP22.18■■□□□ 1.14
CHERP-204ENST00000546538 SYNGAP1Q96PV0 1343 aa22.18■■□□□ 1.14
CHERP-204ENST00000546538 A0A0D9SFI3 127 aa22.17■■□□□ 1.14
CHERP-204ENST00000546538 MYADML2A6NDP7 307 aa22.17■■□□□ 1.14
CHERP-204ENST00000546538 AKR1A1P14550 325 aa22.17■■□□□ 1.14
CHERP-204ENST00000546538 TLE2Q04725 743 aa22.17■■□□□ 1.14
CHERP-204ENST00000546538 FAM227BQ96M60 508 aa22.17■■□□□ 1.14
CHERP-204ENST00000546538 MTMR10Q9NXD2 777 aa22.17■■□□□ 1.14
CHERP-204ENST00000546538 SYNRGQ9UMZ2 1314 aa22.17■■□□□ 1.14
CHERP-204ENST00000546538 A0A1W2PQ45 241 aaPredicted RBP22.16■■□□□ 1.14
CHERP-204ENST00000546538 A0A1W2PQY0 241 aa22.16■■□□□ 1.14
CHERP-204ENST00000546538 TMEM232C9JQI7 657 aa22.16■■□□□ 1.14
CHERP-204ENST00000546538 NOVP48745 357 aa22.16■■□□□ 1.14
CHERP-204ENST00000546538 C9orf50Q5SZB4 431 aa22.16■■□□□ 1.14
CHERP-204ENST00000546538 CCSAPQ6IQ19 270 aaPredicted RBP22.16■■□□□ 1.14
CHERP-204ENST00000546538 ZNF467Q7Z7K2 595 aaPredicted RBP22.16■■□□□ 1.14
CHERP-204ENST00000546538 MSL3Q8N5Y2 521 aaKnown RBP22.16■■□□□ 1.14
CHERP-204ENST00000546538 EVI5LQ96CN4 794 aa22.16■■□□□ 1.14
CHERP-204ENST00000546538 DDX11Q96FC9 970 aa22.16■■□□□ 1.14
CHERP-204ENST00000546538 GMCL1Q96IK5 515 aa22.16■■□□□ 1.14
CHERP-204ENST00000546538 LBHD1Q9BQE6 289 aaPredicted RBP22.16■■□□□ 1.14
CHERP-204ENST00000546538 KATNBL1Q9H079 304 aa22.16■■□□□ 1.14
CHERP-204ENST00000546538 PRDM5Q9NQX1 630 aaPredicted RBP22.16■■□□□ 1.14
CHERP-204ENST00000546538 ANAPC4Q9UJX5 808 aa22.16■■□□□ 1.14
CHERP-204ENST00000546538 FGRP09769 529 aa22.15■■□□□ 1.14
CHERP-204ENST00000546538 MCCP23508 829 aa22.15■■□□□ 1.14
CHERP-204ENST00000546538 OAZ1P54368 228 aa22.15■■□□□ 1.14
CHERP-204ENST00000546538 KLHDC9Q8NEP7 349 aa22.15■■□□□ 1.14
CHERP-204ENST00000546538 BADQ92934 168 aa22.15■■□□□ 1.14
CHERP-204ENST00000546538 AGBL1Q96MI9 1066 aa22.15■■□□□ 1.14
CHERP-204ENST00000546538 HOMER2Q9NSB8 354 aa22.15■■□□□ 1.14
CHERP-204ENST00000546538 CNPY2Q9Y2B0 182 aa22.15■■□□□ 1.14
CHERP-204ENST00000546538 SNAP25P60880 206 aa22.14■■□□□ 1.14
CHERP-204ENST00000546538 CNTN2Q02246 1040 aa22.14■■□□□ 1.14
CHERP-204ENST00000546538 SHHQ15465 462 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms