RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 XPNPEP3Q9NQH7 507 aa15.07■□□□□ 0
COPS7A-221ENST00000546229 SYNRGQ9UMZ2 1314 aa15.07■□□□□ 0
COPS7A-221ENST00000546229 A0A1W2PQ45 241 aaPredicted RBP15.06■□□□□ 0
COPS7A-221ENST00000546229 A0A1W2PQY0 241 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 PGK1P00558 417 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 COPB2P35606 906 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 TLE2Q04725 743 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 ZSCAN25Q6NSZ9 544 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 KLHDC9Q8NEP7 349 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 SLF1Q9BQI6 1058 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 TEX13BQ9BXU2 312 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 KATNBL1Q9H079 304 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 BCL11AQ9H165 835 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 TTYH1Q9H313 450 aaPredicted RBP15.06■□□□□ 0
COPS7A-221ENST00000546229 DCTPP1Q9H773 170 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 SYNGAP1Q96PV0 1343 aa15.06■□□□□ 0
COPS7A-221ENST00000546229 MYADML2A6NDP7 307 aa15.05■□□□□ -0
COPS7A-221ENST00000546229 F5H6K3 240 aa15.05■□□□□ -0
COPS7A-221ENST00000546229 KIAA0355O15063 1070 aa15.05■□□□□ -0
COPS7A-221ENST00000546229 GPAA1O43292 621 aa15.05■□□□□ -0
COPS7A-221ENST00000546229 RARBP10826 455 aa15.05■□□□□ -0
COPS7A-221ENST00000546229 KLRC3Q07444 240 aa15.05■□□□□ -0
COPS7A-221ENST00000546229 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
COPS7A-221ENST00000546229 AMOTL1Q8IY63 956 aa15.05■□□□□ -0
COPS7A-221ENST00000546229 MSL3Q8N5Y2 521 aaKnown RBP15.05■□□□□ -0
COPS7A-221ENST00000546229 PI4K2BQ8TCG2 481 aa15.05■□□□□ -0
COPS7A-221ENST00000546229 MKL1Q969V6 931 aa15.05■□□□□ -0
COPS7A-221ENST00000546229 CEP95Q96GE4 821 aa15.05■□□□□ -0
COPS7A-221ENST00000546229 PRDM5Q9NQX1 630 aaPredicted RBP15.05■□□□□ -0
COPS7A-221ENST00000546229 SALL3Q9BXA9 1300 aa15.05■□□□□ -0
COPS7A-221ENST00000546229 RNF113AO15541 343 aaKnown RBP15.04■□□□□ -0
COPS7A-221ENST00000546229 AKR1A1P14550 325 aa15.04■□□□□ -0
COPS7A-221ENST00000546229 CST5P28325 142 aaPredicted RBP15.04■□□□□ -0
COPS7A-221ENST00000546229 IRX5P78411 483 aaPredicted RBP15.04■□□□□ -0
COPS7A-221ENST00000546229 KCTD2Q14681 263 aa15.04■□□□□ -0
COPS7A-221ENST00000546229 SNRNP48Q6IEG0 339 aaKnown RBP15.04■□□□□ -0
COPS7A-221ENST00000546229 ANKRD33Q7Z3H0 272 aa15.04■□□□□ -0
COPS7A-221ENST00000546229 ZNF467Q7Z7K2 595 aaPredicted RBP15.04■□□□□ -0
COPS7A-221ENST00000546229 CHMP4BQ9H444 224 aaKnown RBP15.04■□□□□ -0
COPS7A-221ENST00000546229 SLC38A10Q9HBR0 1119 aa15.04■□□□□ -0
COPS7A-221ENST00000546229 MTMR4Q9NYA4 1195 aa15.04■□□□□ -0
COPS7A-221ENST00000546229 SYNPO2Q9UMS6 1093 aa15.04■□□□□ -0
COPS7A-221ENST00000546229 REV3LO60673 3130 aa15.03■□□□□ -0
COPS7A-221ENST00000546229 ASTN1O14525 1302 aa15.03■□□□□ -0
COPS7A-221ENST00000546229 CTAGE5O15320 804 aa15.03■□□□□ -0
COPS7A-221ENST00000546229 CLTBP09497 229 aa15.03■□□□□ -0
COPS7A-221ENST00000546229 SMAD3P84022 425 aaKnown RBP15.03■□□□□ -0
COPS7A-221ENST00000546229 FAAP100Q0VG06 881 aa15.03■□□□□ -0
COPS7A-221ENST00000546229 GMCL1P1Q8NEA9 526 aa15.03■□□□□ -0
COPS7A-221ENST00000546229 OTUD7AQ8TE49 926 aaPredicted RBP15.03■□□□□ -0
COPS7A-221ENST00000546229 DDRGK1Q96HY6 314 aa15.03■□□□□ -0
COPS7A-221ENST00000546229 FAM161BQ96MY7 647 aa15.03■□□□□ -0
COPS7A-221ENST00000546229 SEC62Q99442 399 aaKnown RBP15.03■□□□□ -0
COPS7A-221ENST00000546229 UPF3AQ9H1J1 476 aaKnown RBP15.03■□□□□ -0
COPS7A-221ENST00000546229 PRKAG2Q9UGJ0 569 aa15.03■□□□□ -0
COPS7A-221ENST00000546229 ZNF536O15090 1300 aa15.02■□□□□ -0
COPS7A-221ENST00000546229 PRDM1O75626 825 aa15.02■□□□□ -0
COPS7A-221ENST00000546229 ACLYP53396 1101 aa15.02■□□□□ -0
COPS7A-221ENST00000546229 NKX3-2P78367 333 aa15.02■□□□□ -0
COPS7A-221ENST00000546229 RNF180Q86T96 592 aa15.02■□□□□ -0
COPS7A-221ENST00000546229 PRPF38AQ8NAV1 312 aaKnown RBP15.02■□□□□ -0
COPS7A-221ENST00000546229 CDX2Q99626 313 aaPredicted RBP15.02■□□□□ -0
COPS7A-221ENST00000546229 TSEN34Q9BSV6 310 aaKnown RBP15.02■□□□□ -0
COPS7A-221ENST00000546229 COL25A1Q9BXS0 654 aaPredicted RBP15.02■□□□□ -0
COPS7A-221ENST00000546229 TBX21Q9UL17 535 aa15.02■□□□□ -0
COPS7A-221ENST00000546229 TACC3Q9Y6A5 838 aa15.02■□□□□ -0
COPS7A-221ENST00000546229 MINDY4BA8MYZ0 360 aa15.01□□□□□ -0.01
COPS7A-221ENST00000546229 ZFYP08048 801 aaPredicted RBP15.01□□□□□ -0.01
COPS7A-221ENST00000546229 ZNF697Q5TEC3 545 aa15.01□□□□□ -0.01
COPS7A-221ENST00000546229 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.01□□□□□ -0.01
COPS7A-221ENST00000546229 IFNL3Q8IZI9 196 aa15.01□□□□□ -0.01
COPS7A-221ENST00000546229 STK11IPQ8N1F8 1099 aa15.01□□□□□ -0.01
COPS7A-221ENST00000546229 LRRC47Q8N1G4 583 aaKnown RBP15.01□□□□□ -0.01
COPS7A-221ENST00000546229 TOX2Q96NM4 488 aa15.01□□□□□ -0.01
COPS7A-221ENST00000546229 SEMA6BQ9H3T3 888 aa15.01□□□□□ -0.01
COPS7A-221ENST00000546229 CLIP2Q9UDT6 1046 aa15.01□□□□□ -0.01
COPS7A-221ENST00000546229 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.01□□□□□ -0.01
COPS7A-221ENST00000546229 TTC28Q96AY4 2481 aa15.01□□□□□ -0.01
COPS7A-221ENST00000546229 DUSP11O75319 330 aaKnown RBP15□□□□□ -0.01
COPS7A-221ENST00000546229 MYCNP04198 464 aaPredicted RBP15□□□□□ -0.01
COPS7A-221ENST00000546229 GNAT2P19087 354 aa15□□□□□ -0.01
COPS7A-221ENST00000546229 NOVP48745 357 aa15□□□□□ -0.01
COPS7A-221ENST00000546229 CDK7P50613 346 aa15□□□□□ -0.01
COPS7A-221ENST00000546229 OAZ1P54368 228 aa15□□□□□ -0.01
COPS7A-221ENST00000546229 ZMYM1Q5SVZ6 1142 aa15□□□□□ -0.01
COPS7A-221ENST00000546229 RASGRP2Q7LDG7 609 aa15□□□□□ -0.01
COPS7A-221ENST00000546229 FAM133AQ8N9E0 248 aa15□□□□□ -0.01
COPS7A-221ENST00000546229 NEDD1Q8NHV4 660 aa15□□□□□ -0.01
COPS7A-221ENST00000546229 MKNK2Q9HBH9 465 aa15□□□□□ -0.01
COPS7A-221ENST00000546229 RAVER2Q9HCJ3 691 aaKnown RBP15□□□□□ -0.01
COPS7A-221ENST00000546229 CDKN2AIPQ9NXV6 580 aaPredicted RBP15□□□□□ -0.01
COPS7A-221ENST00000546229 CNPY2Q9Y2B0 182 aa15□□□□□ -0.01
COPS7A-221ENST00000546229 PCDHB15Q9Y5E8 787 aa15□□□□□ -0.01
COPS7A-221ENST00000546229 TTC41PQ6P2S7 1318 aa14.99□□□□□ -0.01
COPS7A-221ENST00000546229 MOXD2PA6NHM9 499 aa14.99□□□□□ -0.01
COPS7A-221ENST00000546229 PQBP1O60828 265 aaKnown RBP14.99□□□□□ -0.01
COPS7A-221ENST00000546229 TTLL1O95922 423 aa14.99□□□□□ -0.01
COPS7A-221ENST00000546229 ACVR2BQ13705 512 aa14.99□□□□□ -0.01
COPS7A-221ENST00000546229 KCNA10Q16322 511 aa14.99□□□□□ -0.01
COPS7A-221ENST00000546229 RASIP1Q5U651 963 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms