RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 BRCA1P38398 1863 aaKnown RBP5.56□□□□□ -1.52
LRP6-207ENST00000545658 USP31Q70CQ4 1352 aa5.55□□□□□ -1.52
LRP6-207ENST00000545658 CENPJQ9HC77 1338 aaPredicted RBP5.55□□□□□ -1.52
LRP6-207ENST00000545658 MEGF6O75095 1541 aa5.55□□□□□ -1.52
LRP6-207ENST00000545658 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.55□□□□□ -1.52
LRP6-207ENST00000545658 DYNC1LI2O43237 492 aaPredicted RBP5.55□□□□□ -1.52
LRP6-207ENST00000545658 CPSF6Q16630 551 aaKnown RBP eCLIP5.55□□□□□ -1.52
LRP6-207ENST00000545658 RPS26P11Q5JNZ5 115 aaPredicted RBP5.55□□□□□ -1.52
LRP6-207ENST00000545658 DUSP27Q5VZP5 1158 aa5.55□□□□□ -1.52
LRP6-207ENST00000545658 TMC7Q7Z402 723 aa5.55□□□□□ -1.52
LRP6-207ENST00000545658 LINC00116Q8NCU8 138 aa5.55□□□□□ -1.52
LRP6-207ENST00000545658 GLIS3Q8NEA6 775 aa5.55□□□□□ -1.52
LRP6-207ENST00000545658 GATA6Q92908 595 aa5.55□□□□□ -1.52
LRP6-207ENST00000545658 SMARCC1Q92922 1105 aaPredicted RBP5.55□□□□□ -1.52
LRP6-207ENST00000545658 ALKBH8Q96BT7 664 aaKnown RBP5.55□□□□□ -1.52
LRP6-207ENST00000545658 WDR89Q96FK6 387 aaPredicted RBP5.55□□□□□ -1.52
LRP6-207ENST00000545658 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
LRP6-207ENST00000545658 CCDC86Q9H6F5 360 aaKnown RBP5.55□□□□□ -1.52
LRP6-207ENST00000545658 ACSS3Q9H6R3 686 aa5.55□□□□□ -1.52
LRP6-207ENST00000545658 GPN3Q9UHW5 284 aaPredicted RBP5.55□□□□□ -1.52
LRP6-207ENST00000545658 ARFGEF1Q9Y6D6 1849 aa5.55□□□□□ -1.52
LRP6-207ENST00000545658 PAX4O43316 350 aa5.54□□□□□ -1.52
LRP6-207ENST00000545658 LMNB1P20700 586 aa5.54□□□□□ -1.52
LRP6-207ENST00000545658 MAPK1P28482 360 aa5.54□□□□□ -1.52
LRP6-207ENST00000545658 TMF1P82094 1093 aa5.54□□□□□ -1.52
LRP6-207ENST00000545658 MAP2K1Q02750 393 aaPredicted RBP5.54□□□□□ -1.52
LRP6-207ENST00000545658 MSMPQ1L6U9 139 aa5.54□□□□□ -1.52
LRP6-207ENST00000545658 MPRIPQ6WCQ1 1025 aa5.54□□□□□ -1.52
LRP6-207ENST00000545658 ZNF765Q7L2R6 523 aa5.54□□□□□ -1.52
LRP6-207ENST00000545658 NLGN1Q8N2Q7 840 aa5.54□□□□□ -1.52
LRP6-207ENST00000545658 IP6K1Q92551 441 aa5.54□□□□□ -1.52
LRP6-207ENST00000545658 LTV1Q96GA3 475 aaPredicted RBP5.54□□□□□ -1.52
LRP6-207ENST00000545658 PPP4R2Q9NY27 417 aa5.54□□□□□ -1.52
LRP6-207ENST00000545658 DCTN4Q9UJW0 460 aa5.54□□□□□ -1.52
LRP6-207ENST00000545658 KTN1Q86UP2 1357 aaKnown RBP5.54□□□□□ -1.52
LRP6-207ENST00000545658 FAM208AQ9UK61 1670 aaKnown RBP5.53□□□□□ -1.52
LRP6-207ENST00000545658 PASKQ96RG2 1323 aa5.53□□□□□ -1.52
LRP6-207ENST00000545658 PLCB3Q01970 1234 aa5.53□□□□□ -1.52
LRP6-207ENST00000545658 NME9Q86XW9 330 aa5.53□□□□□ -1.52
LRP6-207ENST00000545658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.53□□□□□ -1.52
LRP6-207ENST00000545658 ABI1Q8IZP0 508 aa5.53□□□□□ -1.52
LRP6-207ENST00000545658 BCO2Q9BYV7 579 aa5.53□□□□□ -1.52
LRP6-207ENST00000545658 GSX1Q9H4S2 264 aaPredicted RBP5.53□□□□□ -1.52
LRP6-207ENST00000545658 CCDC39Q9UFE4 941 aa5.53□□□□□ -1.52
LRP6-207ENST00000545658 TIMELESSQ9UNS1 1208 aa5.53□□□□□ -1.52
LRP6-207ENST00000545658 C4AP0C0L4 1744 aa5.53□□□□□ -1.52
LRP6-207ENST00000545658 PDE4DIPQ5VU43 2346 aa5.53□□□□□ -1.52
LRP6-207ENST00000545658 TNRC18O15417 2968 aaPredicted RBP5.52□□□□□ -1.53
LRP6-207ENST00000545658 LTN1O94822 1766 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 CGNL1Q0VF96 1302 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 EVC2Q86UK5 1308 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 SBF1O95248 1867 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 PNMA6FA0A0J9YX94 578 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 RASSF10A6NK89 507 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 TMPRSS2O15393 492 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 ZNF862O60290 1169 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 GSTP1P09211 210 aaKnown RBP5.52□□□□□ -1.53
LRP6-207ENST00000545658 SLFN14P0C7P3 912 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 GYS1P13807 737 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 CHRNA5P30532 468 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 CYP27A1Q02318 531 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 ID3Q02535 119 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 PPP2R3AQ06190 1150 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 ITPK1Q13572 414 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.52□□□□□ -1.53
LRP6-207ENST00000545658 TP53INP2Q8IXH6 220 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 PIGBQ92521 554 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 KCNB2Q92953 911 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 MCOLN1Q9GZU1 580 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 PIDD1Q9HB75 910 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 C1GALT1Q9NS00 363 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 TMEM39AQ9NV64 488 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 GNEQ9Y223 722 aaKnown RBP5.52□□□□□ -1.53
LRP6-207ENST00000545658 AKAP2Q9Y2D5 859 aa5.52□□□□□ -1.53
LRP6-207ENST00000545658 VIRMAQ69YN4 1812 aaKnown RBP5.52□□□□□ -1.53
LRP6-207ENST00000545658 PCDH11XQ9BZA7 1347 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 PCDH11YQ9BZA8 1340 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 WDR33Q9C0J8 1336 aaKnown RBP5.51□□□□□ -1.53
LRP6-207ENST00000545658 RNGTTO60942 597 aaKnown RBP5.51□□□□□ -1.53
LRP6-207ENST00000545658 BRD1O95696 1058 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 CDK5R2Q13319 367 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 DEFB115Q30KQ5 88 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 NXPE4Q6UWF7 544 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 SEZ6L2Q6UXD5 910 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 VSIG10LQ86VR7 867 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 LDHDQ86WU2 507 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 BSDC1Q9NW68 430 aaPredicted RBP5.51□□□□□ -1.53
LRP6-207ENST00000545658 CRIM1Q9NZV1 1036 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 ZC3H7BQ9UGR2 993 aaKnown RBP5.51□□□□□ -1.53
LRP6-207ENST00000545658 ADGRE2Q9UHX3 823 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 SBNO2Q9Y2G9 1366 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 CD163L1Q9NR16 1453 aa5.51□□□□□ -1.53
LRP6-207ENST00000545658 MAP2P11137 1827 aaKnown RBP5.51□□□□□ -1.53
LRP6-207ENST00000545658 PRNPP04156 253 aa5.5□□□□□ -1.53
LRP6-207ENST00000545658 HOXC9P31274 260 aa5.5□□□□□ -1.53
LRP6-207ENST00000545658 RFC4P35249 363 aa5.5□□□□□ -1.53
LRP6-207ENST00000545658 DSC3Q14574 896 aa5.5□□□□□ -1.53
LRP6-207ENST00000545658 KIF4BQ2VIQ3 1234 aa5.5□□□□□ -1.53
LRP6-207ENST00000545658 OGFOD3Q6PK18 319 aa5.5□□□□□ -1.53
LRP6-207ENST00000545658 SULF2Q8IWU5 870 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms