RNA–Protein interactions for RNA: ENST00000545388.2

IST1-222, Transcript of IST1, ESCRT-III associated factor, human

TSL 2

Gene IST1, Length 630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IST1-222	ENST00000545388	ANKRD45	Q5TZF3	282 aa		13.21	□□□□□ -0.29
IST1-222	ENST00000545388	CCDC129	Q6ZRS4	1044 aa		13.21	□□□□□ -0.29
IST1-222	ENST00000545388	PRPF38A	Q8NAV1	312 aa	Known RBP	13.21	□□□□□ -0.29
IST1-222	ENST00000545388	SLC17A8	Q8NDX2	589 aa		13.21	□□□□□ -0.29
IST1-222	ENST00000545388	REPS2	Q8NFH8	660 aa		13.21	□□□□□ -0.29
IST1-222	ENST00000545388	PI4K2B	Q8TCG2	481 aa		13.21	□□□□□ -0.29
IST1-222	ENST00000545388	LENG1	Q96BZ8	264 aa	Predicted RBP	13.21	□□□□□ -0.29
IST1-222	ENST00000545388	TEX13B	Q9BXU2	312 aa		13.21	□□□□□ -0.29
IST1-222	ENST00000545388	XPNPEP3	Q9NQH7	507 aa		13.21	□□□□□ -0.29
IST1-222	ENST00000545388	MTMR7	Q9Y216	660 aa		13.21	□□□□□ -0.29
IST1-222	ENST00000545388	CNPY2	Q9Y2B0	182 aa		13.21	□□□□□ -0.29
IST1-222	ENST00000545388	GREB1L	Q9C091	1923 aa	Predicted RBP	13.21	□□□□□ -0.3
IST1-222	ENST00000545388	ROBO3	Q96MS0	1386 aa		13.2	□□□□□ -0.3
IST1-222	ENST00000545388	TTLL1	O95922	423 aa		13.2	□□□□□ -0.3
IST1-222	ENST00000545388	SLC3A2	P08195	630 aa	Known RBP	13.2	□□□□□ -0.3
IST1-222	ENST00000545388	MX1	P20591	662 aa		13.2	□□□□□ -0.3
IST1-222	ENST00000545388	COPB2	P35606	906 aa		13.2	□□□□□ -0.3
IST1-222	ENST00000545388	TFAP4	Q01664	338 aa		13.2	□□□□□ -0.3
IST1-222	ENST00000545388	PDE4B	Q07343	736 aa		13.2	□□□□□ -0.3
IST1-222	ENST00000545388	IK	Q13123	557 aa	Predicted RBP	13.2	□□□□□ -0.3
IST1-222	ENST00000545388	SLFN13	Q68D06	897 aa		13.2	□□□□□ -0.3
IST1-222	ENST00000545388	HOMER2	Q9NSB8	354 aa		13.2	□□□□□ -0.3
IST1-222	ENST00000545388	MTMR4	Q9NYA4	1195 aa		13.2	□□□□□ -0.3
IST1-222	ENST00000545388	IGKV6D-41	A0A0C4DH26	115 aa		13.19	□□□□□ -0.3
IST1-222	ENST00000545388	RRP1	P56182	461 aa	Known RBP	13.19	□□□□□ -0.3
IST1-222	ENST00000545388	CTDSPL2	Q05D32	466 aa		13.19	□□□□□ -0.3
IST1-222	ENST00000545388	PPARA	Q07869	468 aa		13.19	□□□□□ -0.3
IST1-222	ENST00000545388	ZMYM1	Q5SVZ6	1142 aa		13.19	□□□□□ -0.3
IST1-222	ENST00000545388	RNF180	Q86T96	592 aa		13.19	□□□□□ -0.3
IST1-222	ENST00000545388	ANKRD35	Q8N283	1001 aa		13.19	□□□□□ -0.3
IST1-222	ENST00000545388	CRBN	Q96SW2	442 aa		13.19	□□□□□ -0.3
IST1-222	ENST00000545388	INCENP	Q9NQS7	918 aa		13.19	□□□□□ -0.3
IST1-222	ENST00000545388	FEM1B	Q9UK73	627 aa		13.19	□□□□□ -0.3
IST1-222	ENST00000545388	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.19	□□□□□ -0.3
IST1-222	ENST00000545388	DIS3	Q9Y2L1	958 aa	Known RBP	13.19	□□□□□ -0.3
IST1-222	ENST00000545388	TMEM232	C9JQI7	657 aa		13.18	□□□□□ -0.3
IST1-222	ENST00000545388	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.18	□□□□□ -0.3
IST1-222	ENST00000545388	BMP3	P12645	472 aa		13.18	□□□□□ -0.3
IST1-222	ENST00000545388	AKR1A1	P14550	325 aa		13.18	□□□□□ -0.3
IST1-222	ENST00000545388	SH3RF1	Q7Z6J0	888 aa		13.18	□□□□□ -0.3
IST1-222	ENST00000545388	NEDD1	Q8NHV4	660 aa		13.18	□□□□□ -0.3
IST1-222	ENST00000545388	BAD	Q92934	168 aa		13.18	□□□□□ -0.3
IST1-222	ENST00000545388	MKL1	Q969V6	931 aa		13.18	□□□□□ -0.3
IST1-222	ENST00000545388	YTHDC1	Q96MU7	727 aa	Known RBP	13.18	□□□□□ -0.3
IST1-222	ENST00000545388	FAM161B	Q96MY7	647 aa		13.18	□□□□□ -0.3
IST1-222	ENST00000545388	TOMM22	Q9NS69	142 aa		13.18	□□□□□ -0.3
IST1-222	ENST00000545388	STX8	Q9UNK0	236 aa		13.18	□□□□□ -0.3
IST1-222	ENST00000545388	TSPY2	A6NKD2	308 aa		13.17	□□□□□ -0.3
IST1-222	ENST00000545388	MCC	P23508	829 aa		13.17	□□□□□ -0.3
IST1-222	ENST00000545388	TLE2	Q04725	743 aa		13.17	□□□□□ -0.3
IST1-222	ENST00000545388	SLC38A10	Q9HBR0	1119 aa		13.17	□□□□□ -0.3
IST1-222	ENST00000545388	NRBP1	Q9UHY1	535 aa		13.17	□□□□□ -0.3
IST1-222	ENST00000545388	DNAH12	Q6ZR08	3092 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	MCM3AP	O60318	1980 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	RANBP6	O60518	1105 aa	Known RBP	13.16	□□□□□ -0.3
IST1-222	ENST00000545388	NMT2	O60551	498 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	PQBP1	O60828	265 aa	Known RBP	13.16	□□□□□ -0.3
IST1-222	ENST00000545388	SNAI1	O95863	264 aa	Predicted RBP	13.16	□□□□□ -0.3
IST1-222	ENST00000545388	SLC1A4	P43007	532 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	SNAP25	P60880	206 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	SHH	Q15465	462 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	VPS53	Q5VIR6	699 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	GPR153	Q6NV75	609 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	CCDC174	Q6PII3	467 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	KCTD1	Q719H9	257 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	VTI1A	Q96AJ9	217 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	PDLIM7	Q9NR12	457 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	MTMR10	Q9NXD2	777 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	FAM184B	Q9ULE4	1060 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388	PHF24	Q9UPV7	400 aa		13.16	□□□□□ -0.3
IST1-222	ENST00000545388		A0A1W2PQ45	241 aa	Predicted RBP	13.15	□□□□□ -0.3
IST1-222	ENST00000545388		A0A1W2PQY0	241 aa		13.15	□□□□□ -0.3
IST1-222	ENST00000545388	TRIM43B	A6NCK2	446 aa		13.15	□□□□□ -0.3
IST1-222	ENST00000545388	ATP2A1	O14983	1001 aa		13.15	□□□□□ -0.3
IST1-222	ENST00000545388	STAT2	P52630	851 aa		13.15	□□□□□ -0.3
IST1-222	ENST00000545388	IRX5	P78411	483 aa	Predicted RBP	13.15	□□□□□ -0.3
IST1-222	ENST00000545388	ACVR2B	Q13705	512 aa		13.15	□□□□□ -0.3
IST1-222	ENST00000545388	RRP12	Q5JTH9	1297 aa	Known RBP	13.15	□□□□□ -0.3
IST1-222	ENST00000545388	C9orf50	Q5SZB4	431 aa		13.15	□□□□□ -0.3
IST1-222	ENST00000545388	RASGRP2	Q7LDG7	609 aa		13.15	□□□□□ -0.3
IST1-222	ENST00000545388	GMCL1P1	Q8NEA9	526 aa		13.15	□□□□□ -0.3
IST1-222	ENST00000545388	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.15	□□□□□ -0.3
IST1-222	ENST00000545388	AGBL1	Q96MI9	1066 aa		13.15	□□□□□ -0.3
IST1-222	ENST00000545388	STARD7	Q9NQZ5	370 aa		13.15	□□□□□ -0.3
IST1-222	ENST00000545388	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.15	□□□□□ -0.3
IST1-222	ENST00000545388	FBXO40	Q9UH90	709 aa		13.15	□□□□□ -0.3
IST1-222	ENST00000545388	SYNGAP1	Q96PV0	1343 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	SYNRG	Q9UMZ2	1314 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	LTBP2	Q14767	1821 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	DNAJC25-GNG10	A0A024R161	153 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	MYADML2	A6NDP7	307 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	TRIM6-TRIM34	B2RNG4	842 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	ADAMTS4	O75173	837 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	CLTB	P09497	229 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	C6orf222	P0C671	652 aa	Predicted RBP	13.14	□□□□□ -0.31
IST1-222	ENST00000545388	ALAS1	P13196	640 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	RAG1	P15918	1043 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	CNTN2	Q02246	1040 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	SNX17	Q15036	470 aa		13.14	□□□□□ -0.31
IST1-222	ENST00000545388	KCNA10	Q16322	511 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms