RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 ALDH1A1P00352 501 aa15.11■□□□□ 0.01
CDCA3-210ENST00000545368 SCRN1Q12765 414 aa15.11■□□□□ 0.01
CDCA3-210ENST00000545368 COG2Q14746 738 aa15.11■□□□□ 0.01
CDCA3-210ENST00000545368 SYDE2Q5VT97 1194 aa15.11■□□□□ 0.01
CDCA3-210ENST00000545368 TTBK2Q6IQ55 1244 aa15.11■□□□□ 0.01
CDCA3-210ENST00000545368 TMTC3Q6ZXV5 915 aa15.11■□□□□ 0.01
CDCA3-210ENST00000545368 FAM43AQ8N2R8 423 aa15.11■□□□□ 0.01
CDCA3-210ENST00000545368 PRPF38AQ8NAV1 312 aaKnown RBP15.11■□□□□ 0.01
CDCA3-210ENST00000545368 GTF3C2Q8WUA4 911 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-210ENST00000545368 SNX21Q969T3 373 aa15.11■□□□□ 0.01
CDCA3-210ENST00000545368 KIFC2Q96AC6 838 aa15.11■□□□□ 0.01
CDCA3-210ENST00000545368 PARK7Q99497 189 aaKnown RBP15.11■□□□□ 0.01
CDCA3-210ENST00000545368 PTPN18Q99952 460 aa15.11■□□□□ 0.01
CDCA3-210ENST00000545368 ASCC2Q9H1I8 757 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-210ENST00000545368 PPP1R9AQ9ULJ8 1098 aa15.11■□□□□ 0.01
CDCA3-210ENST00000545368 CTDP1Q9Y5B0 961 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-210ENST00000545368 CDKL5O76039 1030 aa15.1■□□□□ 0.01
CDCA3-210ENST00000545368 PLEKHA8P1O95397 391 aa15.1■□□□□ 0.01
CDCA3-210ENST00000545368 LARGE1O95461 756 aa15.1■□□□□ 0.01
CDCA3-210ENST00000545368 CDC27P30260 824 aa15.1■□□□□ 0.01
CDCA3-210ENST00000545368 SLC16A2P36021 539 aa15.1■□□□□ 0.01
CDCA3-210ENST00000545368 TAF1CQ15572 869 aaPredicted RBP15.1■□□□□ 0.01
CDCA3-210ENST00000545368 BTNL9Q6UXG8 535 aa15.1■□□□□ 0.01
CDCA3-210ENST00000545368 SMCR8Q8TEV9 937 aaPredicted RBP15.1■□□□□ 0.01
CDCA3-210ENST00000545368 GTF3C6Q969F1 213 aa15.1■□□□□ 0.01
CDCA3-210ENST00000545368 ZIC5Q96T25 663 aa15.1■□□□□ 0.01
CDCA3-210ENST00000545368 UBA5Q9GZZ9 404 aa15.1■□□□□ 0.01
CDCA3-210ENST00000545368 NCOA5Q9HCD5 579 aaKnown RBP15.1■□□□□ 0.01
CDCA3-210ENST00000545368 FBXO28Q9NVF7 368 aa15.1■□□□□ 0.01
CDCA3-210ENST00000545368 HOXC10Q9NYD6 342 aa15.1■□□□□ 0.01
CDCA3-210ENST00000545368 K7ELQ4 463 aaPredicted RBP15.09■□□□□ 0.01
CDCA3-210ENST00000545368 FDX1P10109 184 aa15.09■□□□□ 0.01
CDCA3-210ENST00000545368 SMARCA1P28370 1054 aa15.09■□□□□ 0.01
CDCA3-210ENST00000545368 DSG3P32926 999 aa15.09■□□□□ 0.01
CDCA3-210ENST00000545368 ADD1P35611 737 aaKnown RBP15.09■□□□□ 0.01
CDCA3-210ENST00000545368 ADGRF4Q8IZF3 695 aa15.09■□□□□ 0.01
CDCA3-210ENST00000545368 TMX3Q96JJ7 454 aa15.09■□□□□ 0.01
CDCA3-210ENST00000545368 SPZ1Q9BXG8 430 aa15.09■□□□□ 0.01
CDCA3-210ENST00000545368 FAM217BQ9NTX9 383 aaPredicted RBP15.09■□□□□ 0.01
CDCA3-210ENST00000545368 PRR12Q9ULL5 1215 aa15.09■□□□□ 0.01
CDCA3-210ENST00000545368 RLFQ13129 1914 aa15.09■□□□□ 0.01
CDCA3-210ENST00000545368 A0A0G2JMZ2 1700 aa15.09■□□□□ 0.01
CDCA3-210ENST00000545368 SPDYE16A6NNV3 312 aaPredicted RBP15.08■□□□□ 0
CDCA3-210ENST00000545368 ZBED4O75132 1171 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 CYP2C8P10632 490 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 ANP32AP39687 249 aaKnown RBP15.08■□□□□ 0
CDCA3-210ENST00000545368 HERVK_113P62684 666 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 BECN1Q14457 450 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 CCDC83Q8IWF9 413 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 CCDC82Q8N4S0 544 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 SRBD1Q8N5C6 995 aaKnown RBP15.08■□□□□ 0
CDCA3-210ENST00000545368 MB21D1Q8N884 522 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 NECAB1Q8N987 351 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 ATG4CQ96DT6 458 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 P2RX7Q99572 595 aaKnown RBP15.08■□□□□ 0
CDCA3-210ENST00000545368 CPVLQ9H3G5 476 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 RIOX1Q9H6W3 641 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 ZFYVE28Q9HCC9 887 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 SEC63Q9UGP8 760 aaKnown RBP15.08■□□□□ 0
CDCA3-210ENST00000545368 CNTNAP5Q8WYK1 1306 aa15.08■□□□□ 0
CDCA3-210ENST00000545368 MYH6P13533 1939 aa15.07■□□□□ 0
CDCA3-210ENST00000545368 VWA5AO00534 786 aa15.07■□□□□ 0
CDCA3-210ENST00000545368 IFNAR1P17181 557 aa15.07■□□□□ 0
CDCA3-210ENST00000545368 AKAP17AQ02040 695 aaKnown RBP15.07■□□□□ 0
CDCA3-210ENST00000545368 CDC37Q16543 378 aaPredicted RBP15.07■□□□□ 0
CDCA3-210ENST00000545368 LBX2Q6XYB7 198 aa15.07■□□□□ 0
CDCA3-210ENST00000545368 TRIM22Q8IYM9 498 aa15.07■□□□□ 0
CDCA3-210ENST00000545368 CMTR1Q8N1G2 835 aaKnown RBP15.07■□□□□ 0
CDCA3-210ENST00000545368 RRP36Q96EU6 259 aaKnown RBP15.07■□□□□ 0
CDCA3-210ENST00000545368 VAT1LQ9HCJ6 419 aa15.07■□□□□ 0
CDCA3-210ENST00000545368 RBM27Q9P2N5 1060 aaKnown RBP15.07■□□□□ 0
CDCA3-210ENST00000545368 COL11A1P12107 1806 aaPredicted RBP15.07■□□□□ 0
CDCA3-210ENST00000545368 CYTH3O43739 400 aa15.06■□□□□ 0
CDCA3-210ENST00000545368 GCLCP48506 637 aaPredicted RBP15.06■□□□□ 0
CDCA3-210ENST00000545368 MAP2K1Q02750 393 aaPredicted RBP15.06■□□□□ 0
CDCA3-210ENST00000545368 SSRP1Q08945 709 aaKnown RBP15.06■□□□□ 0
CDCA3-210ENST00000545368 NBPF11Q86T75 865 aa15.06■□□□□ 0
CDCA3-210ENST00000545368 HOMER1Q86YM7 354 aa15.06■□□□□ 0
CDCA3-210ENST00000545368 SLC26A6Q9BXS9 759 aa15.06■□□□□ 0
CDCA3-210ENST00000545368 RNF26Q9BY78 433 aaPredicted RBP15.06■□□□□ 0
CDCA3-210ENST00000545368 RANBP17Q9H2T7 1088 aaKnown RBP15.06■□□□□ 0
CDCA3-210ENST00000545368 JMJD4Q9H9V9 463 aa15.06■□□□□ 0
CDCA3-210ENST00000545368 SLC38A10Q9HBR0 1119 aa15.06■□□□□ 0
CDCA3-210ENST00000545368 TSHZ2Q9NRE2 1034 aa15.06■□□□□ 0
CDCA3-210ENST00000545368 PNMA2Q9UL42 364 aa15.06■□□□□ 0
CDCA3-210ENST00000545368 ZBTB5O15062 677 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 CA12O43570 354 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 OAZ1P54368 228 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 ST3GAL1Q11201 340 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 NTRK3Q16288 839 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 CCDC174Q6PII3 467 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 PIBF1Q8WXW3 757 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 PHKBQ93100 1093 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 PIGSQ96S52 555 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 LLPHQ9BRT6 129 aaKnown RBP15.05■□□□□ -0
CDCA3-210ENST00000545368 PAGR1Q9BTK6 254 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 BEGAINQ9BUH8 593 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 ADAMTS5Q9UNA0 930 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 RABGAP1Q9Y3P9 1069 aa15.05■□□□□ -0
CDCA3-210ENST00000545368 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms