RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 AGXT2Q9BYV1 514 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 KLF18A0A0U1RQI7 1052 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 PEX10O60683 326 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 PLA2G6O60733 806 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 BCRP11274 1271 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 RXRAP19793 462 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 SLC16A2P36021 539 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 NEK4P51957 841 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 APOBRQ0VD83 1088 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 TOB2Q14106 344 aaPredicted RBP15.9■□□□□ 0.14
SP140-213ENST00000543928 APOA5Q6Q788 366 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 BTNL9Q6UXG8 535 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 SYNE3Q6ZMZ3 975 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 ANKRD13CQ8N6S4 541 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 TXNRD2Q9NNW7 524 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 RBPJLQ9UBG7 517 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 MAD2L2Q9UI95 211 aa15.9■□□□□ 0.14
SP140-213ENST00000543928 NAP1L2Q9ULW6 460 aaPredicted RBP15.9■□□□□ 0.14
SP140-213ENST00000543928 PALM3A6NDB9 673 aaPredicted RBP15.89■□□□□ 0.13
SP140-213ENST00000543928 GPR25O00155 361 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 CALM1P0DP23 149 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 CALM2P0DP24 149 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 CALM3P0DP25 149 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 FAM110CQ1W6H9 321 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 CCDC144CPQ8IYA2 1237 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 STAG2Q8N3U4 1231 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 MB21D1Q8N884 522 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 CTCFLQ8NI51 663 aaPredicted RBP15.89■□□□□ 0.13
SP140-213ENST00000543928 MAP3K14Q99558 947 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 UBA5Q9GZZ9 404 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 CPVLQ9H3G5 476 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 BTBD7Q9P203 1132 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 PRR12Q9ULL5 1215 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 ADAMTS5Q9UNA0 930 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 RABGAP1Q9Y3P9 1069 aa15.89■□□□□ 0.13
SP140-213ENST00000543928 GOLGA8BA8MQT2 603 aa15.88■□□□□ 0.13
SP140-213ENST00000543928 KLRF2D3W0D1 207 aa15.88■□□□□ 0.13
SP140-213ENST00000543928 VWA5AO00534 786 aa15.88■□□□□ 0.13
SP140-213ENST00000543928 ZBTB43O43298 467 aa15.88■□□□□ 0.13
SP140-213ENST00000543928 CNMDO75829 334 aa15.88■□□□□ 0.13
SP140-213ENST00000543928 HSPA8P11142 646 aaKnown RBP15.88■□□□□ 0.13
SP140-213ENST00000543928 KIF5BP33176 963 aa15.88■□□□□ 0.13
SP140-213ENST00000543928 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
SP140-213ENST00000543928 AK2P54819 239 aa15.88■□□□□ 0.13
SP140-213ENST00000543928 NOM1Q5C9Z4 860 aaKnown RBP15.88■□□□□ 0.13
SP140-213ENST00000543928 SYDE2Q5VT97 1194 aa15.88■□□□□ 0.13
SP140-213ENST00000543928 LARP6Q9BRS8 491 aaKnown RBP15.88■□□□□ 0.13
SP140-213ENST00000543928 ALDH8A1Q9H2A2 487 aaPredicted RBP15.88■□□□□ 0.13
SP140-213ENST00000543928 MORF4L1Q9UBU8 362 aa15.88■□□□□ 0.13
SP140-213ENST00000543928 A0A0G2JMZ2 1700 aa15.88■□□□□ 0.13
SP140-213ENST00000543928 ZBED4O75132 1171 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 EVCP57679 992 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 SNAP25P60880 206 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 ERVK-9P63128 1117 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 ERVK-24P63145 666 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 SP3Q02447 781 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 PLS1Q14651 629 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 RABEP1Q15276 862 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 FANCBQ8NB91 859 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 REPS2Q8NFH8 660 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 GPRC5AQ8NFJ5 357 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 ZNF296Q8WUU4 475 aaPredicted RBP15.87■□□□□ 0.13
SP140-213ENST00000543928 SLC38A10Q9HBR0 1119 aa15.87■□□□□ 0.13
SP140-213ENST00000543928 CTDP1Q9Y5B0 961 aaPredicted RBP15.87■□□□□ 0.13
SP140-213ENST00000543928 GOLGA8AA7E2F4 631 aa15.86■□□□□ 0.13
SP140-213ENST00000543928 DHX16O60231 1041 aaKnown RBP15.86■□□□□ 0.13
SP140-213ENST00000543928 FKTNO75072 461 aa15.86■□□□□ 0.13
SP140-213ENST00000543928 FDX1P10109 184 aa15.86■□□□□ 0.13
SP140-213ENST00000543928 LBX1P52954 281 aa15.86■□□□□ 0.13
SP140-213ENST00000543928 RCAN1P53805 252 aa15.86■□□□□ 0.13
SP140-213ENST00000543928 TMEM132BQ14DG7 1078 aa15.86■□□□□ 0.13
SP140-213ENST00000543928 ANKRD1Q15327 319 aa15.86■□□□□ 0.13
SP140-213ENST00000543928 RTN1Q16799 776 aa15.86■□□□□ 0.13
SP140-213ENST00000543928 Q3C1V9 767 aa15.86■□□□□ 0.13
SP140-213ENST00000543928 ADGRF4Q8IZF3 695 aa15.86■□□□□ 0.13
SP140-213ENST00000543928 HPS5Q9UPZ3 1129 aa15.86■□□□□ 0.13
SP140-213ENST00000543928 COL11A1P12107 1806 aaPredicted RBP15.86■□□□□ 0.13
SP140-213ENST00000543928 ECM2O94769 699 aaPredicted RBP15.85■□□□□ 0.13
SP140-213ENST00000543928 PLEKHA8P1O95397 391 aa15.85■□□□□ 0.13
SP140-213ENST00000543928 PDIA3P30101 505 aaKnown RBP15.85■□□□□ 0.13
SP140-213ENST00000543928 GNAQP50148 359 aa15.85■□□□□ 0.13
SP140-213ENST00000543928 METAP2P50579 478 aaKnown RBP eCLIP15.85■□□□□ 0.13
SP140-213ENST00000543928 CCDC174Q6PII3 467 aa15.85■□□□□ 0.13
SP140-213ENST00000543928 NOL8Q76FK4 1167 aaKnown RBP15.85■□□□□ 0.13
SP140-213ENST00000543928 NBPF11Q86T75 865 aa15.85■□□□□ 0.13
SP140-213ENST00000543928 CPXCR1Q8N123 301 aa15.85■□□□□ 0.13
SP140-213ENST00000543928 SPATC1LQ9H0A9 340 aa15.85■□□□□ 0.13
SP140-213ENST00000543928 RANBP17Q9H2T7 1088 aaKnown RBP15.85■□□□□ 0.13
SP140-213ENST00000543928 RAVER2Q9HCJ3 691 aaKnown RBP15.85■□□□□ 0.13
SP140-213ENST00000543928 VAT1LQ9HCJ6 419 aa15.85■□□□□ 0.13
SP140-213ENST00000543928 RBM28Q9NW13 759 aaKnown RBP15.85■□□□□ 0.13
SP140-213ENST00000543928 ZNF214Q9UL59 606 aaPredicted RBP15.85■□□□□ 0.13
SP140-213ENST00000543928 CCNA1P78396 465 aa15.84■□□□□ 0.13
SP140-213ENST00000543928 LACTBP83111 547 aaPredicted RBP15.84■□□□□ 0.13
SP140-213ENST00000543928 SLC35G1Q2M3R5 365 aa15.84■□□□□ 0.13
SP140-213ENST00000543928 TMTC3Q6ZXV5 915 aa15.84■□□□□ 0.13
SP140-213ENST00000543928 CMTR1Q8N1G2 835 aaKnown RBP15.84■□□□□ 0.13
SP140-213ENST00000543928 CD99L2Q8TCZ2 262 aa15.84■□□□□ 0.13
SP140-213ENST00000543928 ZNF274Q96GC6 653 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms