RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 CC2D2BQ6DHV5 1058 aa19.41■□□□□ 0.7
PTPRO-209ENST00000543886 POTEAQ6S8J7 498 aa19.41■□□□□ 0.7
PTPRO-209ENST00000543886 C17orf53Q8N3J3 647 aaPredicted RBP19.41■□□□□ 0.7
PTPRO-209ENST00000543886 ZNF646O15015 1829 aaPredicted RBP19.41■□□□□ 0.7
PTPRO-209ENST00000543886 MPHOSPH10O00566 681 aaKnown RBP19.4■□□□□ 0.7
PTPRO-209ENST00000543886 LMOD1P29536 600 aaPredicted RBP19.4■□□□□ 0.7
PTPRO-209ENST00000543886 GNA11P29992 359 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 MLKLQ8NB16 471 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 PIGSQ96S52 555 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 SPTLC3Q9NUV7 552 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 IFNKQ9P0W0 207 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 LONP1P36776 959 aaKnown RBP19.4■□□□□ 0.7
PTPRO-209ENST00000543886 MORC3Q14149 939 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 INF2Q27J81 1249 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 PPP4R3BQ5MIZ7 849 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 DNTTIP2Q5QJE6 756 aaKnown RBP19.4■□□□□ 0.7
PTPRO-209ENST00000543886 KRT25Q7Z3Z0 450 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 CLEC10AQ8IUN9 316 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 C7orf43Q8WVR3 580 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 PAGE5Q96GU1 130 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 UBA5Q9GZZ9 404 aa19.4■□□□□ 0.7
PTPRO-209ENST00000543886 DHX36Q9H2U1 1008 aaKnown RBP19.4■□□□□ 0.7
PTPRO-209ENST00000543886 SMCO2A6NFE2 343 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 hCG_1984214I3L0E3 225 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 BMP6P22004 513 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 TXLNAP40222 546 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 AFMP43652 599 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 LRMPQ12912 555 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 ZNF713Q8N859 430 aaPredicted RBP19.39■□□□□ 0.69
PTPRO-209ENST00000543886 XPO4Q9C0E2 1151 aaKnown RBP19.39■□□□□ 0.69
PTPRO-209ENST00000543886 RIOX1Q9H6W3 641 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 SERPINA10Q9UK55 444 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 MYO1BO43795 1136 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 NEMFO60524 1076 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 CACNB3P54284 484 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 TCP10Q12799 353 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 IL17AQ16552 155 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 FILIP1Q7Z7B0 1213 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 C4orf32Q8N8J7 132 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 IQUBQ8NA54 791 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 CCDC17Q96LX7 622 aa19.39■□□□□ 0.69
PTPRO-209ENST00000543886 GREB1LQ9C091 1923 aaPredicted RBP19.38■□□□□ 0.69
PTPRO-209ENST00000543886 SNHG28P0DPA3 235 aa19.38■□□□□ 0.69
PTPRO-209ENST00000543886 SH3RF1Q7Z6J0 888 aa19.38■□□□□ 0.69
PTPRO-209ENST00000543886 ZFPM1Q8IX07 1006 aa19.38■□□□□ 0.69
PTPRO-209ENST00000543886 SPATA20Q8TB22 786 aa19.38■□□□□ 0.69
PTPRO-209ENST00000543886 CACTINQ8WUQ7 758 aaKnown RBP19.38■□□□□ 0.69
PTPRO-209ENST00000543886 IDI2Q9BXS1 227 aa19.38■□□□□ 0.69
PTPRO-209ENST00000543886 TRIM34Q9BYJ4 488 aa19.38■□□□□ 0.69
PTPRO-209ENST00000543886 R3HCC1Q9Y3T6 440 aaKnown RBP19.38■□□□□ 0.69
PTPRO-209ENST00000543886 PCDHAC2Q9Y5I4 1007 aa19.38■□□□□ 0.69
PTPRO-209ENST00000543886 PPIP5K2O43314 1243 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 TERF1P54274 439 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 FANCCQ00597 558 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 ATP2B2Q01814 1243 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 NONOQ15233 471 aaKnown RBP eCLIP19.37■□□□□ 0.69
PTPRO-209ENST00000543886 DTHD1Q6ZMT9 781 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 ZSCAN29Q8IWY8 852 aaPredicted RBP19.37■□□□□ 0.69
PTPRO-209ENST00000543886 GPCPD1Q9NPB8 672 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 IMPACTQ9P2X3 320 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 MYH4Q9Y623 1939 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 ESYT2A0FGR8 921 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 LAD1O00515 517 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 GSDMDP57764 484 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 LRRC8AQ8IWT6 810 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 HSD3B7Q9H2F3 369 aa19.37■□□□□ 0.69
PTPRO-209ENST00000543886 CBFA2T2O43439 604 aa19.36■□□□□ 0.69
PTPRO-209ENST00000543886 C21orf2O43822 256 aa19.36■□□□□ 0.69
PTPRO-209ENST00000543886 SERPINC1P01008 464 aa19.36■□□□□ 0.69
PTPRO-209ENST00000543886 ATP1A3P13637 1013 aa19.36■□□□□ 0.69
PTPRO-209ENST00000543886 ZNF543Q08ER8 600 aa19.36■□□□□ 0.69
PTPRO-209ENST00000543886 PI4KBQ9UBF8 816 aa19.36■□□□□ 0.69
PTPRO-209ENST00000543886 SIPA1L1O43166 1804 aa19.36■□□□□ 0.69
PTPRO-209ENST00000543886 NPM3O75607 178 aaKnown RBP19.36■□□□□ 0.69
PTPRO-209ENST00000543886 CCDC96Q2M329 555 aa19.36■□□□□ 0.69
PTPRO-209ENST00000543886 REXO1Q8N1G1 1221 aaKnown RBP19.36■□□□□ 0.69
PTPRO-209ENST00000543886 FANCLQ9NW38 375 aa19.36■□□□□ 0.69
PTPRO-209ENST00000543886 FAM198AQ9UFP1 575 aa19.36■□□□□ 0.69
PTPRO-209ENST00000543886 DPYDQ12882 1025 aa19.35■□□□□ 0.69
PTPRO-209ENST00000543886 E2F4Q16254 413 aa19.35■□□□□ 0.69
PTPRO-209ENST00000543886 GRIPAP1Q4V328 841 aa19.35■□□□□ 0.69
PTPRO-209ENST00000543886 GSDMAQ96QA5 445 aa19.35■□□□□ 0.69
PTPRO-209ENST00000543886 DNAJC18Q9H819 358 aa19.35■□□□□ 0.69
PTPRO-209ENST00000543886 DDTLA6NHG4 134 aaPredicted RBP19.34■□□□□ 0.69
PTPRO-209ENST00000543886 SF3B2Q13435 895 aaKnown RBP19.34■□□□□ 0.69
PTPRO-209ENST00000543886 GPATCH4Q5T3I0 446 aaKnown RBP19.34■□□□□ 0.69
PTPRO-209ENST00000543886 TMC6Q7Z403 805 aa19.34■□□□□ 0.69
PTPRO-209ENST00000543886 PRPHP41219 470 aa19.34■□□□□ 0.69
PTPRO-209ENST00000543886 ADCY7P51828 1080 aa19.34■□□□□ 0.69
PTPRO-209ENST00000543886 UBASH3AP57075 661 aa19.34■□□□□ 0.69
PTPRO-209ENST00000543886 LETM2Q2VYF4 491 aa19.34■□□□□ 0.69
PTPRO-209ENST00000543886 CERKLQ49MI3 558 aaPredicted RBP19.34■□□□□ 0.69
PTPRO-209ENST00000543886 CT47A1Q5JQC4 288 aaPredicted RBP19.34■□□□□ 0.69
PTPRO-209ENST00000543886 PDXDC2PQ6P474 469 aa19.34■□□□□ 0.69
PTPRO-209ENST00000543886 NEK8Q86SG6 692 aa19.34■□□□□ 0.69
PTPRO-209ENST00000543886 RASSF8Q8NHQ8 419 aa19.34■□□□□ 0.69
PTPRO-209ENST00000543886 ENOX1Q8TC92 643 aaKnown RBP19.34■□□□□ 0.69
PTPRO-209ENST00000543886 TMEM60Q9H2L4 133 aa19.34■□□□□ 0.69
PTPRO-209ENST00000543886 CCNT1O60563 726 aaKnown RBP19.33■□□□□ 0.69
PTPRO-209ENST00000543886 ERCC5P28715 1186 aaPredicted RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms