RNA–Protein interactions for RNA: ENST00000543772.2

PSMC1-202, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2 BASIC

Gene PSMC1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-202ENST00000543772 RETREG3Q86VR2 466 aa9.89□□□□□ -0.83
PSMC1-202ENST00000543772 DYNLL2Q96FJ2 89 aa9.89□□□□□ -0.83
PSMC1-202ENST00000543772 TMEM39BQ9GZU3 492 aa9.89□□□□□ -0.83
PSMC1-202ENST00000543772 DNAJC18Q9H819 358 aa9.89□□□□□ -0.83
PSMC1-202ENST00000543772 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.89□□□□□ -0.83
PSMC1-202ENST00000543772 FDX1P10109 184 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 JUNDP17535 347 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 EXOSC10Q01780 885 aaKnown RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 FOXC1Q12948 553 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 RRP1BQ14684 758 aaKnown RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 IMMTQ16891 758 aaKnown RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 SLC4A8Q2Y0W8 1093 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 FOXP4Q8IVH2 680 aaPredicted RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 PARP9Q8IXQ6 854 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 BRI3BPQ8WY22 251 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 SYMPKQ92797 1274 aaKnown RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 ZNF333Q96JL9 665 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 TM6SF1Q9BZW5 370 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 DHX36Q9H2U1 1008 aaKnown RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 UPF2Q9HAU5 1272 aaKnown RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 PTCH2Q9Y6C5 1203 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 TRIM66O15016 1216 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 ZBTB24O43167 697 aaPredicted RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 MYCP01106 439 aaPredicted RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 POLR3DP05423 398 aaPredicted RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 CPA1P15085 419 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 CDK8P49336 464 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 JAG1P78504 1218 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 TAF1CQ15572 869 aaPredicted RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 AKNAD1Q5T1N1 836 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 C16orf86Q6ZW13 317 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 TTC6Q86TZ1 520 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 SLC44A5Q8NCS7 719 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 STAG1Q8WVM7 1258 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 EHD4Q9H223 541 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 PI4KBQ9UBF8 816 aa9.88□□□□□ -0.83
PSMC1-202ENST00000543772 ARPP21Q9UBL0 812 aaPredicted RBP9.88□□□□□ -0.83
PSMC1-202ENST00000543772 ZSWIM8A7E2V4 1837 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 ROBO3Q96MS0 1386 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 CEP290O15078 2479 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 COL2A1P02458 1487 aaPredicted RBP9.87□□□□□ -0.83
PSMC1-202ENST00000543772 CCL15-CCL14A0A0B4J2E2 113 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 PHF20L1A8MW92 1017 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 WNT7AO00755 349 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 ORC4O43929 436 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 AVPP01185 164 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 RASA1P20936 1047 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 SHMT1P34896 483 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 ANTXR2P58335 489 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 TNFAIP1Q13829 316 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 VGLL4Q14135 290 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 CCL15Q16663 113 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 SLC9C1Q4G0N8 1177 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 RNF20Q5VTR2 975 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 TATDN1Q6P1N9 297 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 CYB5R4Q7L1T6 521 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 MB21D2Q8IYB1 491 aaPredicted RBP9.87□□□□□ -0.83
PSMC1-202ENST00000543772 STK11IPQ8N1F8 1099 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 CRIPAKQ8N1N5 446 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 FAM43AQ8N2R8 423 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.87□□□□□ -0.83
PSMC1-202ENST00000543772 TMOD2Q9NZR1 351 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 ZSWIM5Q9P217 1185 aa9.87□□□□□ -0.83
PSMC1-202ENST00000543772 CDK5RAP2Q96SN8 1893 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 NEDD4P46934 1319 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 FAM196BA6NMK8 535 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 PRDM1O75626 825 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 ZKSCAN1P17029 563 aaPredicted RBP9.86□□□□□ -0.83
PSMC1-202ENST00000543772 GTF2A2P52657 109 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 MFSD6Q6ZSS7 791 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.86□□□□□ -0.83
PSMC1-202ENST00000543772 DDRGK1Q96HY6 314 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 TTC14Q96N46 770 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 NEK1Q96PY6 1258 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 ARHGAP39Q9C0H5 1083 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 ZFYVE28Q9HCC9 887 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 SERPINB13Q9UIV8 391 aa9.86□□□□□ -0.83
PSMC1-202ENST00000543772 TRIOBPQ9H2D6 2365 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 DDX60LQ5H9U9 1706 aaKnown RBP9.85□□□□□ -0.83
PSMC1-202ENST00000543772 MOXD2PA6NHM9 499 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 B4E1Z4 1266 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 H0YGN5 161 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 PCP11498 1178 aaKnown RBP9.85□□□□□ -0.83
PSMC1-202ENST00000543772 TNNI2P48788 182 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 ARHGEF6Q15052 776 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 SHROOM1Q2M3G4 852 aaPredicted RBP9.85□□□□□ -0.83
PSMC1-202ENST00000543772 RUFY3Q7L099 469 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 MIGA2Q7L4E1 593 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 NBPF11Q86T75 865 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 SIAH1Q8IUQ4 282 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 ZSCAN29Q8IWY8 852 aaPredicted RBP9.85□□□□□ -0.83
PSMC1-202ENST00000543772 FBXL16Q8N461 479 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 IGDCC4Q8TDY8 1250 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 SH3TC2Q8TF17 1288 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 JAKMIP1Q96N16 626 aaKnown RBP9.85□□□□□ -0.83
PSMC1-202ENST00000543772 UPF3BQ9BZI7 483 aaKnown RBP9.85□□□□□ -0.83
PSMC1-202ENST00000543772 ALDH8A1Q9H2A2 487 aaPredicted RBP9.85□□□□□ -0.83
PSMC1-202ENST00000543772 IL17RBQ9NRM6 502 aa9.85□□□□□ -0.83
PSMC1-202ENST00000543772 ZNF112Q9UJU3 913 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms