RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 CCDC178Q5BJE1 867 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 FAM160B2Q86V87 743 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 MAP4K1Q92918 833 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 TTC14Q96N46 770 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 MMP19Q99542 508 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 UNC93B1Q9H1C4 597 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 MROH8Q9H579 483 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 TAF6LQ9Y6J9 622 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 TNKSO95271 1327 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 ERICH2A1L162 156 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 SLC15A5A6NIM6 579 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 E7EWF7 191 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 IFIT3O14879 490 aaKnown RBP12.97□□□□□ -0.33
DDB1-222ENST00000543627 DHX16O60231 1041 aaKnown RBP12.97□□□□□ -0.33
DDB1-222ENST00000543627 SLC25A27O95847 323 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 FCER1AP12319 257 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 ADORA2AP29274 412 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 CNGA1P29973 690 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 MLLT1Q03111 559 aaPredicted RBP12.97□□□□□ -0.33
DDB1-222ENST00000543627 MORN1Q5T089 497 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 IFIT1BQ5T764 474 aaKnown RBP12.97□□□□□ -0.33
DDB1-222ENST00000543627 ERICH6BQ5W0A0 696 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 CYB5R4Q7L1T6 521 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 NCOA7Q8NI08 942 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 PXYLP1Q8TE99 480 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 DCAF4Q8WV16 495 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 TRIB2Q92519 343 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 GMCL1Q96IK5 515 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 LSG1Q9H089 658 aaKnown RBP12.97□□□□□ -0.33
DDB1-222ENST00000543627 SYNPO2Q9UMS6 1093 aa12.97□□□□□ -0.33
DDB1-222ENST00000543627 GREB1LQ9C091 1923 aaPredicted RBP12.97□□□□□ -0.33
DDB1-222ENST00000543627 TFRCP02786 760 aaKnown RBP12.96□□□□□ -0.33
DDB1-222ENST00000543627 HMGCRP04035 888 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 PGK2P07205 417 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 KCTD2Q14681 263 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 DGKHQ86XP1 1220 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 RIOX2Q8IUF8 465 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 NPLOC4Q8TAT6 608 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 DEFB118Q96PH6 123 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 TEX13BQ9BXU2 312 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 UBA5Q9GZZ9 404 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 VAT1LQ9HCJ6 419 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 PRR12Q9ULL5 1215 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 ADAMTS5Q9UNA0 930 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 RIPK3Q9Y572 518 aa12.96□□□□□ -0.33
DDB1-222ENST00000543627 HTTP42858 3142 aa12.96□□□□□ -0.34
DDB1-222ENST00000543627 SLC27A2O14975 620 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 STRNO43815 780 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 PDHBP11177 359 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 ALAS1P13196 640 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
DDB1-222ENST00000543627 SYDE2Q5VT97 1194 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 MFSD14CQ5VZR4 134 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 CREB3L3Q68CJ9 461 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 STOX1Q6ZVD7 989 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 ANKRD35Q8N283 1001 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 ENAHQ8N8S7 591 aaPredicted RBP12.95□□□□□ -0.34
DDB1-222ENST00000543627 SHCBP1Q8NEM2 672 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 AGBL1Q96MI9 1066 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 APBA2Q99767 749 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 CPVLQ9H3G5 476 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 SLC38A10Q9HBR0 1119 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 HMX1Q9NP08 348 aaPredicted RBP12.95□□□□□ -0.34
DDB1-222ENST00000543627 SLC5A4Q9NY91 659 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 FLRT1Q9NZU1 646 aa12.95□□□□□ -0.34
DDB1-222ENST00000543627 ZNF214Q9UL59 606 aaPredicted RBP12.95□□□□□ -0.34
DDB1-222ENST00000543627 COBLO75128 1261 aa12.94□□□□□ -0.34
DDB1-222ENST00000543627 TAL1P17542 331 aaPredicted RBP12.94□□□□□ -0.34
DDB1-222ENST00000543627 CYP2C19P33261 490 aa12.94□□□□□ -0.34
DDB1-222ENST00000543627 NOVP48745 357 aa12.94□□□□□ -0.34
DDB1-222ENST00000543627 GRB14Q14449 540 aa12.94□□□□□ -0.34
DDB1-222ENST00000543627 WTAPQ15007 396 aa12.94□□□□□ -0.34
DDB1-222ENST00000543627 SART3Q15020 963 aaKnown RBP12.94□□□□□ -0.34
DDB1-222ENST00000543627 TMEM67Q5HYA8 995 aa12.94□□□□□ -0.34
DDB1-222ENST00000543627 NFXL1Q6ZNB6 911 aa12.94□□□□□ -0.34
DDB1-222ENST00000543627 REPS2Q8NFH8 660 aa12.94□□□□□ -0.34
DDB1-222ENST00000543627 USP6NLQ92738 828 aa12.94□□□□□ -0.34
DDB1-222ENST00000543627 COL11A1P12107 1806 aaPredicted RBP12.93□□□□□ -0.34
DDB1-222ENST00000543627 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
DDB1-222ENST00000543627 PARP1P09874 1014 aaKnown RBP12.93□□□□□ -0.34
DDB1-222ENST00000543627 XRCC5P13010 732 aaKnown RBP12.93□□□□□ -0.34
DDB1-222ENST00000543627 COPB2P35606 906 aa12.93□□□□□ -0.34
DDB1-222ENST00000543627 CACNB2Q08289 660 aaPredicted RBP12.93□□□□□ -0.34
DDB1-222ENST00000543627 ZNF543Q08ER8 600 aa12.93□□□□□ -0.34
DDB1-222ENST00000543627 PRAMEF19Q5SWL8 479 aa12.93□□□□□ -0.34
DDB1-222ENST00000543627 RNF20Q5VTR2 975 aa12.93□□□□□ -0.34
DDB1-222ENST00000543627 TRMT44Q8IYL2 757 aaKnown RBP12.93□□□□□ -0.34
DDB1-222ENST00000543627 NUP133Q8WUM0 1156 aa12.93□□□□□ -0.34
DDB1-222ENST00000543627 TRERF1Q96PN7 1200 aa12.93□□□□□ -0.34
DDB1-222ENST00000543627 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDB1-222ENST00000543627 PCDH10Q9P2E7 1040 aa12.93□□□□□ -0.34
DDB1-222ENST00000543627 CCPG1Q9ULG6 757 aa12.93□□□□□ -0.34
DDB1-222ENST00000543627 RLFQ13129 1914 aa12.93□□□□□ -0.34
DDB1-222ENST00000543627 RPTORQ8N122 1335 aa12.92□□□□□ -0.34
DDB1-222ENST00000543627 PRC1O43663 620 aa12.92□□□□□ -0.34
DDB1-222ENST00000543627 GJB1P08034 283 aa12.92□□□□□ -0.34
DDB1-222ENST00000543627 FDX1P10109 184 aa12.92□□□□□ -0.34
DDB1-222ENST00000543627 CCND3P30281 292 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms