RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 NCLP19338 710 aaKnown RBP13.36□□□□□ -0.27
COPS7A-217ENST00000543537 TOB2Q14106 344 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-217ENST00000543537 ME3Q16798 604 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 PPP4R3BQ5MIZ7 849 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 MORN1Q5T089 497 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 MAP3K21Q5TCX8 1036 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 ATL3Q6DD88 541 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 SGMS1Q86VZ5 419 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 MB21D2Q8IYB1 491 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-217ENST00000543537 TRMT44Q8IYL2 757 aaKnown RBP13.36□□□□□ -0.27
COPS7A-217ENST00000543537 GTF3C6Q969F1 213 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 NUDT12Q9BQG2 462 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 UNC93B1Q9H1C4 597 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 PORCNQ9H237 461 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 RPAP3Q9H6T3 665 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-217ENST00000543537 SH2D4AQ9H788 454 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 BIN2Q9UBW5 565 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-217ENST00000543537 TPCN1Q9ULQ1 816 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 ISY1Q9ULR0 285 aaKnown RBP13.36□□□□□ -0.27
COPS7A-217ENST00000543537 CYP2D7A0A087X1C5 515 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 PRC1O43663 620 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 STX6O43752 255 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 MYCP01106 439 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-217ENST00000543537 FGRP09769 529 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 CCNA1P78396 465 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 ICA1Q05084 483 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 COG2Q14746 738 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 ZYXQ15942 572 aaKnown RBP13.35□□□□□ -0.27
COPS7A-217ENST00000543537 GPR142Q7Z601 462 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 IQCA1Q86XH1 822 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 MB21D1Q8N884 522 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 FAM184AQ8NB25 1140 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 WASF1Q92558 559 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 BRF1Q92994 677 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 ZSCAN16Q9H4T2 348 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-217ENST00000543537 VCPKMTQ9H867 229 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 KANSL2Q9H9L4 492 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 ARHGEF10LQ9HCE6 1279 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 HOXC10Q9NYD6 342 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 CEP290O15078 2479 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 RPTORQ8N122 1335 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 RLFQ13129 1914 aa13.35□□□□□ -0.27
COPS7A-217ENST00000543537 GREB1LQ9C091 1923 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-217ENST00000543537 MPHOSPH10O00566 681 aaKnown RBP13.34□□□□□ -0.27
COPS7A-217ENST00000543537 CPLX1O14810 134 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 ORC4O43929 436 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 PEX10O60683 326 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 HOXC6P09630 235 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 CALM1P0DP23 149 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 CALM2P0DP24 149 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 CALM3P0DP25 149 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 PPARAQ07869 468 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 KIAA1755Q5JYT7 1200 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 LARP1BQ659C4 914 aaKnown RBP13.34□□□□□ -0.27
COPS7A-217ENST00000543537 PLEKHH3Q7Z736 793 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 CCDC83Q8IWF9 413 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.34□□□□□ -0.27
COPS7A-217ENST00000543537 EPB41L4AQ9HCS5 686 aaPredicted RBP13.34□□□□□ -0.27
COPS7A-217ENST00000543537 BTBD7Q9P203 1132 aa13.34□□□□□ -0.27
COPS7A-217ENST00000543537 MYH8P13535 1937 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 WDR46O15213 610 aaKnown RBP13.33□□□□□ -0.28
COPS7A-217ENST00000543537 FOXP2O15409 715 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 BAG4O95429 457 aaKnown RBP13.33□□□□□ -0.28
COPS7A-217ENST00000543537 IGHA2P01877 340 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
COPS7A-217ENST00000543537 GJB2P29033 226 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 RGS2P41220 211 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 NBR1Q14596 966 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 STOX1Q6ZVD7 989 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 ANKLE1Q8NAG6 615 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 SHCBP1Q8NEM2 672 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 TRIB2Q92519 343 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 APBA2Q99767 749 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 UBAC1Q9BSL1 405 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 PAGR1Q9BTK6 254 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.33□□□□□ -0.28
COPS7A-217ENST00000543537 SYNPO2Q9UMS6 1093 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 ADAMTS5Q9UNA0 930 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 A0A0G2JMZ2 1700 aa13.33□□□□□ -0.28
COPS7A-217ENST00000543537 CCDC69A6NI79 296 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 SLC15A5A6NIM6 579 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 MBD3O95983 291 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 RASA1P20936 1047 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 SYT1P21579 422 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 PTPREP23469 700 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 PDIA3P30101 505 aaKnown RBP13.32□□□□□ -0.28
COPS7A-217ENST00000543537 DSG3P32926 999 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 MAP2K5Q13163 448 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 GRB14Q14449 540 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 SMARCC2Q8TAQ2 1214 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 DEFB118Q96PH6 123 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 HMX1Q9NP08 348 aaPredicted RBP13.32□□□□□ -0.28
COPS7A-217ENST00000543537 FOXD4L1Q9NU39 408 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 PLIN4Q96Q06 1357 aa13.32□□□□□ -0.28
COPS7A-217ENST00000543537 IGKV6D-41A0A0C4DH26 115 aa13.31□□□□□ -0.28
COPS7A-217ENST00000543537 IFIT3O14879 490 aaKnown RBP13.31□□□□□ -0.28
COPS7A-217ENST00000543537 STRNO43815 780 aa13.31□□□□□ -0.28
COPS7A-217ENST00000543537 FARP2O94887 1054 aaPredicted RBP13.31□□□□□ -0.28
COPS7A-217ENST00000543537 EEF2P13639 858 aaKnown RBP13.31□□□□□ -0.28
COPS7A-217ENST00000543537 CYP2B6P20813 491 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms