RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 CYP2C19P33261 490 aa20.64■□□□□ 0.89
LTBR-210ENST00000542830 SLC1A4P43007 532 aa20.64■□□□□ 0.89
LTBR-210ENST00000542830 LHX8Q68G74 356 aa20.64■□□□□ 0.89
LTBR-210ENST00000542830 SNRNP48Q6IEG0 339 aaKnown RBP20.64■□□□□ 0.89
LTBR-210ENST00000542830 FAM160B2Q86V87 743 aa20.64■□□□□ 0.89
LTBR-210ENST00000542830 DIS3LQ8TF46 1054 aaKnown RBP20.64■□□□□ 0.89
LTBR-210ENST00000542830 CHURC1Q8WUH1 139 aa20.64■□□□□ 0.89
LTBR-210ENST00000542830 RNF41Q9H4P4 317 aaPredicted RBP20.64■□□□□ 0.89
LTBR-210ENST00000542830 SLC38A10Q9HBR0 1119 aa20.64■□□□□ 0.89
LTBR-210ENST00000542830 IL17RBQ9NRM6 502 aa20.64■□□□□ 0.89
LTBR-210ENST00000542830 DDX20Q9UHI6 824 aaKnown RBP20.64■□□□□ 0.89
LTBR-210ENST00000542830 DIS3Q9Y2L1 958 aaKnown RBP20.64■□□□□ 0.89
LTBR-210ENST00000542830 H0YGN5 161 aa20.63■□□□□ 0.89
LTBR-210ENST00000542830 CYBAP13498 195 aa20.63■□□□□ 0.89
LTBR-210ENST00000542830 NOVP48745 357 aa20.63■□□□□ 0.89
LTBR-210ENST00000542830 NT5C2P49902 561 aa20.63■□□□□ 0.89
LTBR-210ENST00000542830 STAT2P52630 851 aa20.63■□□□□ 0.89
LTBR-210ENST00000542830 OAZ1P54368 228 aa20.63■□□□□ 0.89
LTBR-210ENST00000542830 RRP12Q5JTH9 1297 aaKnown RBP20.63■□□□□ 0.89
LTBR-210ENST00000542830 MAML3Q96JK9 1138 aa20.63■□□□□ 0.89
LTBR-210ENST00000542830 C11orf49Q9H6J7 331 aa20.63■□□□□ 0.89
LTBR-210ENST00000542830 ISY1Q9ULR0 285 aaKnown RBP20.63■□□□□ 0.89
LTBR-210ENST00000542830 TACC3Q9Y6A5 838 aa20.63■□□□□ 0.89
LTBR-210ENST00000542830 CEP290O15078 2479 aa20.63■□□□□ 0.89
LTBR-210ENST00000542830 TMEM232C9JQI7 657 aa20.62■□□□□ 0.89
LTBR-210ENST00000542830 EVI5O60447 810 aa20.62■□□□□ 0.89
LTBR-210ENST00000542830 NMT2O60551 498 aa20.62■□□□□ 0.89
LTBR-210ENST00000542830 PLA2G6O60733 806 aa20.62■□□□□ 0.89
LTBR-210ENST00000542830 CNGA1P29973 690 aa20.62■□□□□ 0.89
LTBR-210ENST00000542830 MNX1P50219 401 aaPredicted RBP20.62■□□□□ 0.89
LTBR-210ENST00000542830 HAND2P61296 217 aa20.62■□□□□ 0.89
LTBR-210ENST00000542830 AKNAD1Q5T1N1 836 aa20.62■□□□□ 0.89
LTBR-210ENST00000542830 MFSD6Q6ZSS7 791 aa20.62■□□□□ 0.89
LTBR-210ENST00000542830 STAG1Q8WVM7 1258 aa20.62■□□□□ 0.89
LTBR-210ENST00000542830 TCP11L1Q9NUJ3 509 aa20.62■□□□□ 0.89
LTBR-210ENST00000542830 MCCP23508 829 aa20.61■□□□□ 0.89
LTBR-210ENST00000542830 PDE4AP27815 886 aa20.61■□□□□ 0.89
LTBR-210ENST00000542830 IKQ13123 557 aaPredicted RBP20.61■□□□□ 0.89
LTBR-210ENST00000542830 CPXCR1Q8N123 301 aa20.61■□□□□ 0.89
LTBR-210ENST00000542830 DSCC1Q9BVC3 393 aa20.61■□□□□ 0.89
LTBR-210ENST00000542830 FBXO40Q9UH90 709 aa20.61■□□□□ 0.89
LTBR-210ENST00000542830 NRBP1Q9UHY1 535 aa20.61■□□□□ 0.89
LTBR-210ENST00000542830 ZNF213O14771 459 aa20.6■□□□□ 0.89
LTBR-210ENST00000542830 TTC22Q5TAA0 569 aa20.6■□□□□ 0.89
LTBR-210ENST00000542830 RCSD1Q6JBY9 416 aa20.6■□□□□ 0.89
LTBR-210ENST00000542830 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.6■□□□□ 0.89
LTBR-210ENST00000542830 TRPV1Q8NER1 839 aa20.6■□□□□ 0.89
LTBR-210ENST00000542830 CHST13Q8NET6 341 aa20.6■□□□□ 0.89
LTBR-210ENST00000542830 RAVER2Q9HCJ3 691 aaKnown RBP20.6■□□□□ 0.89
LTBR-210ENST00000542830 ZNFX1Q9P2E3 1918 aaKnown RBP20.6■□□□□ 0.89
LTBR-210ENST00000542830 PGK2P07205 417 aa20.59■□□□□ 0.89
LTBR-210ENST00000542830 TOP1P11387 765 aaKnown RBP20.59■□□□□ 0.89
LTBR-210ENST00000542830 ZNF792Q3KQV3 632 aa20.59■□□□□ 0.89
LTBR-210ENST00000542830 MSL3Q8N5Y2 521 aaKnown RBP20.59■□□□□ 0.89
LTBR-210ENST00000542830 DCAF4Q8WV16 495 aa20.59■□□□□ 0.89
LTBR-210ENST00000542830 ESR2Q92731 530 aa20.59■□□□□ 0.89
LTBR-210ENST00000542830 DDX11Q96FC9 970 aa20.59■□□□□ 0.89
LTBR-210ENST00000542830 RIPK3Q9Y572 518 aa20.59■□□□□ 0.89
LTBR-210ENST00000542830 SEPT4O43236 478 aa20.58■□□□□ 0.89
LTBR-210ENST00000542830 SLC4A3P48751 1232 aa20.58■□□□□ 0.89
LTBR-210ENST00000542830 HABP4Q5JVS0 413 aaKnown RBP20.58■□□□□ 0.89
LTBR-210ENST00000542830 TBC1D10CQ8IV04 446 aa20.58■□□□□ 0.89
LTBR-210ENST00000542830 TTC14Q96N46 770 aa20.58■□□□□ 0.89
LTBR-210ENST00000542830 TINF2Q9BSI4 451 aa20.58■□□□□ 0.89
LTBR-210ENST00000542830 CTNNA3Q9UI47 895 aa20.58■□□□□ 0.89
LTBR-210ENST00000542830 SLC34A2O95436 690 aa20.57■□□□□ 0.88
LTBR-210ENST00000542830 COL6A1P12109 1028 aa20.57■□□□□ 0.88
LTBR-210ENST00000542830 GSPT1P15170 499 aaKnown RBP20.57■□□□□ 0.88
LTBR-210ENST00000542830 IMMTQ16891 758 aaKnown RBP20.57■□□□□ 0.88
LTBR-210ENST00000542830 CCDC96Q2M329 555 aa20.57■□□□□ 0.88
LTBR-210ENST00000542830 KCTD1Q719H9 257 aa20.57■□□□□ 0.88
LTBR-210ENST00000542830 TMEM47Q9BQJ4 181 aa20.57■□□□□ 0.88
LTBR-210ENST00000542830 PFASO15067 1338 aa20.56■□□□□ 0.88
LTBR-210ENST00000542830 RAD50Q92878 1312 aa20.56■□□□□ 0.88
LTBR-210ENST00000542830 DNM1LO00429 736 aa20.56■□□□□ 0.88
LTBR-210ENST00000542830 TKFCQ3LXA3 575 aa20.56■□□□□ 0.88
LTBR-210ENST00000542830 CCDC178Q5BJE1 867 aa20.56■□□□□ 0.88
LTBR-210ENST00000542830 ANKRD35Q8N283 1001 aa20.56■□□□□ 0.88
LTBR-210ENST00000542830 ARRDC4Q8NCT1 418 aa20.56■□□□□ 0.88
LTBR-210ENST00000542830 RUFY2Q8WXA3 655 aa20.56■□□□□ 0.88
LTBR-210ENST00000542830 COLQQ9Y215 455 aaPredicted RBP20.56■□□□□ 0.88
LTBR-210ENST00000542830 MTMR7Q9Y216 660 aa20.56■□□□□ 0.88
LTBR-210ENST00000542830 FRMPD3Q5JV73 1810 aa20.55■□□□□ 0.88
LTBR-210ENST00000542830 DNAJC25-GNG10A0A024R161 153 aa20.55■□□□□ 0.88
LTBR-210ENST00000542830 PRAMEF19Q5SWL8 479 aa20.55■□□□□ 0.88
LTBR-210ENST00000542830 ZNF467Q7Z7K2 595 aaPredicted RBP20.55■□□□□ 0.88
LTBR-210ENST00000542830 CHMP4CQ96CF2 233 aa20.55■□□□□ 0.88
LTBR-210ENST00000542830 ACAD9Q9H845 621 aa20.55■□□□□ 0.88
LTBR-210ENST00000542830 PRR12Q9ULL5 1215 aa20.55■□□□□ 0.88
LTBR-210ENST00000542830 PLXNA1Q9UIW2 1896 aa20.55■□□□□ 0.88
LTBR-210ENST00000542830 NEDD4P46934 1319 aa20.54■□□□□ 0.88
LTBR-210ENST00000542830 SYNGAP1Q96PV0 1343 aa20.54■□□□□ 0.88
LTBR-210ENST00000542830 IQCA1Q86XH1 822 aa20.54■□□□□ 0.88
LTBR-210ENST00000542830 C7orf61Q8IZ16 206 aa20.54■□□□□ 0.88
LTBR-210ENST00000542830 CNPY2Q9Y2B0 182 aa20.54■□□□□ 0.88
LTBR-210ENST00000542830 ZNF536O15090 1300 aa20.53■□□□□ 0.88
LTBR-210ENST00000542830 LAMA4Q16363 1823 aa20.53■□□□□ 0.88
LTBR-210ENST00000542830 MAMDC4Q6UXC1 1216 aa20.53■□□□□ 0.88
LTBR-210ENST00000542830 BTNL9Q6UXG8 535 aa20.53■□□□□ 0.88
LTBR-210ENST00000542830 CHRDL2Q6WN34 429 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms