RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 FLT1P17948 1338 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 POLRMTO00411 1230 aaKnown RBP11.41□□□□□ -0.58
TOP3A-208ENST00000542570 BMP3P12645 472 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 CMA1P23946 247 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 FAM83BQ5T0W9 1011 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 TMC4Q7Z404 712 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 VTI1AQ96AJ9 217 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 SH2D4AQ9H788 454 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 NFAT5O94916 1531 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 F5H6K3 240 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 AKR1B10O60218 316 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 IRX3P78415 501 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-208ENST00000542570 KLRC3Q07444 240 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 TNFAIP1Q13829 316 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 GOLPH3LQ9H4A5 285 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 DNAI1Q9UI46 699 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 PPP1R12BO60237 982 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-208ENST00000542570 ADKP55263 362 aaKnown RBP11.4□□□□□ -0.58
TOP3A-208ENST00000542570 PABPC4Q13310 644 aaKnown RBP eCLIP11.4□□□□□ -0.581e-10■■□□□ 14.2
TOP3A-208ENST00000542570 ATL3Q6DD88 541 aa11.4□□□□□ -0.58
TOP3A-208ENST00000542570 CSGALNACT2Q8N6G5 542 aa11.4□□□□□ -0.58
TOP3A-208ENST00000542570 TSC1Q92574 1164 aa11.4□□□□□ -0.58
TOP3A-208ENST00000542570 GOPCQ9HD26 462 aa11.4□□□□□ -0.58
TOP3A-208ENST00000542570 CSADQ9Y600 493 aa11.4□□□□□ -0.58
TOP3A-208ENST00000542570 KRBA2Q6ZNG9 492 aa11.4□□□□□ -0.58
TOP3A-208ENST00000542570 CHURC1Q8WUH1 139 aa11.4□□□□□ -0.58
TOP3A-208ENST00000542570 DCPSQ96C86 337 aaKnown RBP11.4□□□□□ -0.58
TOP3A-208ENST00000542570 SPAG5Q96R06 1193 aa11.4□□□□□ -0.58
TOP3A-208ENST00000542570 CRACR2AQ9BSW2 395 aa11.4□□□□□ -0.58
TOP3A-208ENST00000542570 RMND1Q9NWS8 449 aa11.4□□□□□ -0.58
TOP3A-208ENST00000542570 ZHX2Q9Y6X8 837 aa11.4□□□□□ -0.58
TOP3A-208ENST00000542570 RASA3Q14644 834 aa11.4□□□□□ -0.59
TOP3A-208ENST00000542570 CERS3Q8IU89 383 aa11.4□□□□□ -0.59
TOP3A-208ENST00000542570 ZNF397Q8NF99 534 aaPredicted RBP11.4□□□□□ -0.59
TOP3A-208ENST00000542570 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.4□□□□□ -0.59
TOP3A-208ENST00000542570 DDX25Q9UHL0 483 aaKnown RBP11.4□□□□□ -0.59
TOP3A-208ENST00000542570 ZKSCAN5Q9Y2L8 839 aa11.4□□□□□ -0.59
TOP3A-208ENST00000542570 SLC10A5Q5PT55 438 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 NCAPG2Q86XI2 1143 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 DGKHQ86XP1 1220 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 CCDC17Q96LX7 622 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 KIAA1024Q9UPX6 916 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 ZBED4O75132 1171 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 OR52Z1P0C646 297 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 EIF2AK2P19525 551 aaKnown RBP11.39□□□□□ -0.59
TOP3A-208ENST00000542570 SPA17Q15506 151 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 CDC37Q16543 378 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-208ENST00000542570 PPP4R3BQ5MIZ7 849 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 DPH6Q7L8W6 267 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 VGLL2Q8N8G2 317 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 WRNIP1Q96S55 665 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 RIOK1Q9BRS2 568 aaKnown RBP11.39□□□□□ -0.59
TOP3A-208ENST00000542570 AMNQ9BXJ7 453 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 SRRTQ9BXP5 876 aaKnown RBP11.39□□□□□ -0.59
TOP3A-208ENST00000542570 PXDNLA1KZ92 1463 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 POTEMA6NI47 508 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 SFI1A8K8P3 1242 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 GAS7O60861 476 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 NOP2P46087 812 aaKnown RBP11.39□□□□□ -0.59
TOP3A-208ENST00000542570 TBC1D8BQ0IIM8 1120 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 ANKRD35Q8N283 1001 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 PCDHA4Q9UN74 947 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 HPS5Q9UPZ3 1129 aa11.39□□□□□ -0.59
TOP3A-208ENST00000542570 MED1Q15648 1581 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-208ENST00000542570 PRPF3O43395 683 aaKnown RBP11.38□□□□□ -0.59
TOP3A-208ENST00000542570 WDHD1O75717 1129 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-208ENST00000542570 ATP1A3P13637 1013 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 ALX1Q15699 326 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 TEX35Q5T0J7 233 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 ZFPM1Q8IX07 1006 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 NLRP12P59046 1061 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 GRIN1Q05586 938 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 MICALL2Q8IY33 904 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 LZTS2Q9BRK4 669 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 CNOT7Q9UIV1 285 aaKnown RBP11.38□□□□□ -0.59
TOP3A-208ENST00000542570 PDE4DIPQ5VU43 2346 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 MACROD2A1Z1Q3 448 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 RASA1P20936 1047 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 RAPGEF1Q13905 1077 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 TSGA10IPQ3SY00 556 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 NBPF11Q86T75 865 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 FOXP1Q9H334 677 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-208ENST00000542570 PCDHB13Q9Y5F0 798 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 PNPLA7Q6ZV29 1317 aa11.38□□□□□ -0.59
TOP3A-208ENST00000542570 ZNF75DP51815 510 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 SNW1Q13573 536 aaKnown RBP11.37□□□□□ -0.59
TOP3A-208ENST00000542570 PTPROQ16827 1216 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 CCDC181Q5TID7 509 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 PLA2G4DQ86XP0 818 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 MYCT1Q8N699 235 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 NELFBQ8WX92 580 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 FERMT2Q96AC1 680 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 FAM193AP78312 1265 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 ST3GAL1Q11201 340 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 ARID5BQ14865 1188 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 DHX36Q9H2U1 1008 aaKnown RBP11.37□□□□□ -0.59
TOP3A-208ENST00000542570 RAVER2Q9HCJ3 691 aaKnown RBP11.37□□□□□ -0.59
TOP3A-208ENST00000542570 POLR3EQ9NVU0 708 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 VEGFAP15692 232 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms