RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 TMEM232C9JQI7 657 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 KDM4AO75164 1064 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 ADORA2AP29274 412 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 STAT2P52630 851 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 FAM160B2Q86V87 743 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 NCAPG2Q86XI2 1143 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 CHURC1Q8WUH1 139 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 DCAF4Q8WV16 495 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 ANKS1AQ92625 1134 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 MAP4K1Q92918 833 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 KIFC2Q96AC6 838 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 TEX13BQ9BXU2 312 aa18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 U3KPZ7 1027 aaPredicted RBP18.21■□□□□ 0.51
ECHDC2-223ENST00000542552 ZBED4O75132 1171 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 SGPL1O95470 568 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 NEFLP07196 543 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 CYP21A2P08686 494 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 FDX1P10109 184 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 COPB2P35606 906 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 RASGRP2Q7LDG7 609 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 DGKHQ86XP1 1220 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 NPLOC4Q8TAT6 608 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 U2AF1L4Q8WU68 220 aaKnown RBP18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 KRT23Q9C075 422 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 CNNM2Q9H8M5 875 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 FLRT1Q9NZU1 646 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 ZSWIM5Q9P217 1185 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 RPTORQ8N122 1335 aa18.2■□□□□ 0.5
ECHDC2-223ENST00000542552 B4E1Z4 1266 aa18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 COBLO75128 1261 aa18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 FCER1AP12319 257 aa18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 CAPN2P17655 700 aa18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 OAZ1P54368 228 aa18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 CACNB2Q08289 660 aaPredicted RBP18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 CCDC178Q5BJE1 867 aa18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 KCTD1Q719H9 257 aa18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 ZKSCAN3Q9BRR0 538 aa18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 ESYT1Q9BSJ8 1104 aa18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 CRISPLD2Q9H0B8 497 aa18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.19■□□□□ 0.56e-7■□□□□ 8.4
ECHDC2-223ENST00000542552 RIPK3Q9Y572 518 aa18.19■□□□□ 0.5
ECHDC2-223ENST00000542552 SNHG28P0DPA3 235 aa18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 PDHBP11177 359 aa18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 PRKAR2AP13861 404 aaKnown RBP18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 SNRNP48Q6IEG0 339 aaKnown RBP18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 BTNL9Q6UXG8 535 aa18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 UBE2Q1Q7Z7E8 422 aa18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 DPP9Q86TI2 863 aa18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 IQCA1Q86XH1 822 aa18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 CHMP4CQ96CF2 233 aa18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 DEFB118Q96PH6 123 aa18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 ZSCAN10Q96SZ4 725 aaPredicted RBP18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 HMX1Q9NP08 348 aaPredicted RBP18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 TAF6LQ9Y6J9 622 aa18.18■□□□□ 0.5
ECHDC2-223ENST00000542552 ERICH6BQ5W0A0 696 aa18.17■□□□□ 0.5
ECHDC2-223ENST00000542552 OLFML2BQ68BL8 750 aa18.17■□□□□ 0.5
ECHDC2-223ENST00000542552 ENAHQ8N8S7 591 aaPredicted RBP18.17■□□□□ 0.5
ECHDC2-223ENST00000542552 MMP19Q99542 508 aa18.17■□□□□ 0.5
ECHDC2-223ENST00000542552 LSG1Q9H089 658 aaKnown RBP18.17■□□□□ 0.5
ECHDC2-223ENST00000542552 RAVER2Q9HCJ3 691 aaKnown RBP18.17■□□□□ 0.5
ECHDC2-223ENST00000542552 PRR12Q9ULL5 1215 aa18.17■□□□□ 0.5
ECHDC2-223ENST00000542552 ZNF536O15090 1300 aa18.17■□□□□ 0.5
ECHDC2-223ENST00000542552 PLXNA1Q9UIW2 1896 aa18.16■□□□□ 0.5
ECHDC2-223ENST00000542552 TTBK2Q6IQ55 1244 aa18.16■□□□□ 0.5
ECHDC2-223ENST00000542552 CPXCR1Q8N123 301 aa18.16■□□□□ 0.5
ECHDC2-223ENST00000542552 SLC5A4Q9NY91 659 aa18.16■□□□□ 0.5
ECHDC2-223ENST00000542552 ISY1Q9ULR0 285 aaKnown RBP18.16■□□□□ 0.5
ECHDC2-223ENST00000542552 MTMR7Q9Y216 660 aa18.16■□□□□ 0.5
ECHDC2-223ENST00000542552 RBM8AQ9Y5S9 174 aaKnown RBP18.16■□□□□ 0.5
ECHDC2-223ENST00000542552 CENPBP07199 599 aaPredicted RBP18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 ZNF543Q08ER8 600 aa18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 IKQ13123 557 aaPredicted RBP18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 KCTD2Q14681 263 aa18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 CCDC96Q2M329 555 aa18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 ZNF792Q3KQV3 632 aa18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 MFSD14CQ5VZR4 134 aa18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 CYB5R4Q7L1T6 521 aa18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 MAML3Q96JK9 1138 aa18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 DIS3Q9Y2L1 958 aaKnown RBP18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 CTDP1Q9Y5B0 961 aaPredicted RBP18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 TNKSO95271 1327 aa18.15■□□□□ 0.5
ECHDC2-223ENST00000542552 DNAJC25-GNG10A0A024R161 153 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 E7EWF7 191 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 PGK2P07205 417 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 CCND3P30281 292 aaPredicted RBP18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 CYP2C19P33261 490 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 SEC23AQ15436 765 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 LHX8Q68G74 356 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 KIAA1211Q6ZU35 1233 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 STOX1Q6ZVD7 989 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 PNMA1Q8ND90 353 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 CHST13Q8NET6 341 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 AGBL1Q96MI9 1066 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 RANBP17Q9H2T7 1088 aaKnown RBP18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 FBXO40Q9UH90 709 aa18.14■□□□□ 0.49
ECHDC2-223ENST00000542552 TFRCP02786 760 aaKnown RBP18.13■□□□□ 0.49
ECHDC2-223ENST00000542552 SLC16A2P36021 539 aa18.13■□□□□ 0.49
ECHDC2-223ENST00000542552 TRDNQ13061 729 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms