RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 F5H6K3 240 aa12.65□□□□□ -0.38
SCG3-202ENST00000542355 NR1I2O75469 434 aa12.65□□□□□ -0.38
SCG3-202ENST00000542355 SLC16A2P36021 539 aa12.65□□□□□ -0.38
SCG3-202ENST00000542355 SLC1A4P43007 532 aa12.65□□□□□ -0.38
SCG3-202ENST00000542355 KLRC3Q07444 240 aa12.65□□□□□ -0.38
SCG3-202ENST00000542355 PTPAQ15257 358 aa12.65□□□□□ -0.38
SCG3-202ENST00000542355 GPATCH4Q5T3I0 446 aaKnown RBP12.65□□□□□ -0.38
SCG3-202ENST00000542355 ADALQ6DHV7 355 aa12.65□□□□□ -0.38
SCG3-202ENST00000542355 GPC2Q8N158 579 aa12.65□□□□□ -0.38
SCG3-202ENST00000542355 A6NJR5 290 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 STXBP3O00186 592 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 ADAMTS3O15072 1205 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 YBX3P16989 372 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCG3-202ENST00000542355 CALML3P27482 149 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 NOM1Q5C9Z4 860 aaKnown RBP12.64□□□□□ -0.39
SCG3-202ENST00000542355 TNFRSF25Q93038 417 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 GPRC5DQ9NZD1 345 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 PCDHB6Q9Y5E3 794 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 A0A1W2PRG0 241 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 CAMK4Q16566 473 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 ADGRF4Q8IZF3 695 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 BLIDQ8IZY5 108 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 TEPSINQ96N21 525 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 PCDHA4Q9UN74 947 aa12.64□□□□□ -0.39
SCG3-202ENST00000542355 PPP6R2O75170 966 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 LETM1O95202 739 aaPredicted RBP12.63□□□□□ -0.39
SCG3-202ENST00000542355 ECE1P42892 770 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 NAPAP54920 295 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 MAP3K10Q02779 954 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 LRSAM1Q6UWE0 723 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 PIK3AP1Q6ZUJ8 805 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 CCDC148Q8NFR7 591 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 DCAF4Q8WV16 495 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 GOLPH3LQ9H4A5 285 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 JMJD4Q9H9V9 463 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 RYDENQ9NUL5 291 aaKnown RBP12.63□□□□□ -0.39
SCG3-202ENST00000542355 RNF181Q9P0P0 153 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.63□□□□□ -0.39
SCG3-202ENST00000542355 ZBTB21Q9ULJ3 1066 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 ARFGEF1Q9Y6D6 1849 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 BAZ2BQ9UIF8 2168 aaKnown RBP12.63□□□□□ -0.39
SCG3-202ENST00000542355 DDNO94850 711 aaPredicted RBP12.63□□□□□ -0.39
SCG3-202ENST00000542355 NDUFB10O96000 172 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 CAP2P40123 477 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 EPS15P42566 896 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 IRF5Q13568 498 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 ANGEL2Q5VTE6 544 aaKnown RBP12.63□□□□□ -0.39
SCG3-202ENST00000542355 JMYQ8N9B5 988 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 FSIP1Q8NA03 581 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 GMCL1P1Q8NEA9 526 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 TRPM4Q8TD43 1214 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 ACER1Q8TDN7 264 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 NUP88Q99567 741 aaPredicted RBP12.63□□□□□ -0.39
SCG3-202ENST00000542355 FAM117AQ9C073 453 aa12.63□□□□□ -0.39
SCG3-202ENST00000542355 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
SCG3-202ENST00000542355 A0A1B0GVL5 298 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 A0A1W2PQ27 194 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 A0A1W2PQ64 194 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 A0A1W2PQD8 194 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 SMCO2A6NFE2 343 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 USP17L10C9JJH3 530 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 AXDND1Q5T1B0 1012 aaPredicted RBP12.62□□□□□ -0.39
SCG3-202ENST00000542355 CCDC73Q6ZRK6 1079 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 SPICE1Q8N0Z3 855 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 RASGRP4Q8TDF6 673 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 CCDC12Q8WUD4 166 aaPredicted RBP12.62□□□□□ -0.39
SCG3-202ENST00000542355 MRPS27Q92552 414 aaKnown RBP12.62□□□□□ -0.39
SCG3-202ENST00000542355 COA7Q96BR5 231 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 NUP62CLQ9H1M0 184 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 ARHGEF10LQ9HCE6 1279 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 DDX19AQ9NUU7 478 aaKnown RBP12.62□□□□□ -0.39
SCG3-202ENST00000542355 NOL7Q9UMY1 257 aaKnown RBP12.62□□□□□ -0.39
SCG3-202ENST00000542355 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 TRIM75PA6NK02 468 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 SNW1Q13573 536 aaKnown RBP12.62□□□□□ -0.39
SCG3-202ENST00000542355 L1TD1Q5T7N2 865 aaKnown RBP12.62□□□□□ -0.39
SCG3-202ENST00000542355 NBPF12Q5TAG4 269 aaPredicted RBP12.62□□□□□ -0.39
SCG3-202ENST00000542355 GALNT17Q6IS24 598 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 RETREG2Q8NC44 543 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 CLIC6Q96NY7 704 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 ZMYND12Q9H0C1 365 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 TNMDQ9H2S6 317 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 GRPEL1Q9HAV7 217 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 PCDHA6Q9UN73 950 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 PCDHA8Q9Y5H6 950 aa12.62□□□□□ -0.39
SCG3-202ENST00000542355 PHF20L1A8MW92 1017 aa12.61□□□□□ -0.39
SCG3-202ENST00000542355 M0R2N6 131 aa12.61□□□□□ -0.39
SCG3-202ENST00000542355 WNT7AO00755 349 aa12.61□□□□□ -0.39
SCG3-202ENST00000542355 HIRAP54198 1017 aaPredicted RBP12.61□□□□□ -0.39
SCG3-202ENST00000542355 ZNF174Q15697 407 aa12.61□□□□□ -0.39
SCG3-202ENST00000542355 PRAMEF18Q5VWM3 479 aa12.61□□□□□ -0.39
SCG3-202ENST00000542355 GMCL1Q96IK5 515 aa12.61□□□□□ -0.39
SCG3-202ENST00000542355 C6orf50Q9HD87 102 aa12.61□□□□□ -0.39
SCG3-202ENST00000542355 CEP131Q9UPN4 1083 aa12.61□□□□□ -0.39
SCG3-202ENST00000542355 MYH8P13535 1937 aa12.61□□□□□ -0.39
SCG3-202ENST00000542355 ASNSP08243 561 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 BMP3P12645 472 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 CMA1P23946 247 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 GNA11P29992 359 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms