RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	CDR1	P51861	262 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	SAMD7	Q7Z3H4	446 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	PNMA8A	Q86V59	439 aa	Predicted RBP	13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	TRIM47	Q96LD4	638 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	NOP56	O00567	594 aa	Known RBP	13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	CHMP2A	O43633	222 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	FAM13A	O94988	1023 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	FAM160A1	Q05DH4	1040 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	SPP2	Q13103	211 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	SALL3	Q9BXA9	1300 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	STRCP1	A6NGW2	1772 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	RGPD5	Q99666	1765 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	INF2	Q27J81	1249 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	CCDC40	Q4G0X9	1142 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	TMTC3	Q6ZXV5	915 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	SV2B	Q7L1I2	683 aa		13.92	□□□□□ -0.18
ABCB8-222	ENST00000542328	KIF5C	O60282	957 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	FAM114A1	Q8IWE2	563 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	PSMA7	O14818	248 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	TCERG1L	Q5VWI1	586 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	NCAPH2	Q6IBW4	605 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	PROM2	Q8N271	834 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	PLIN2	Q99541	437 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	TTC12	Q9H892	705 aa	Predicted RBP	13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	CACNA1F	O60840	1977 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	CD2BP2	O95400	341 aa	Known RBP	13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	TOB2	Q14106	344 aa	Predicted RBP	13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	SKIDA1	Q1XH10	827 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	TDRD12	Q587J7	1177 aa	Known RBP	13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	SNX29	Q8TEQ0	813 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	BICD1	Q96G01	975 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	FOXP1	Q9H334	677 aa	Predicted RBP	13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	LY9	Q9HBG7	655 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	KCNH3	Q9ULD8	1083 aa		13.91	□□□□□ -0.18
ABCB8-222	ENST00000542328	PNMA6F	A0A0J9YX94	578 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328		F5H6K3	240 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	KLRC3	Q07444	240 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	CDC37	Q16543	378 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	RCSD1	Q6JBY9	416 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	ARHGEF6	Q15052	776 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	SGMS1	Q86VZ5	419 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	MYO6	Q9UM54	1294 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	PCDHA4	Q9UN74	947 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	LRRC37A3	O60309	1634 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	ERLIN1	O75477	346 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	CETN1	Q12798	172 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	CNKSR2	Q8WXI2	1034 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	PRMT6	Q96LA8	375 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	DEFB129	Q9H1M3	183 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	KCP	Q6ZWJ8	1503 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	RGPD2	P0DJD1	1756 aa		13.9	□□□□□ -0.18
ABCB8-222	ENST00000542328	NMT2	O60551	498 aa		13.9	□□□□□ -0.19
ABCB8-222	ENST00000542328	LARGE1	O95461	756 aa		13.9	□□□□□ -0.19
ABCB8-222	ENST00000542328	TRAPPC10	P48553	1259 aa		13.9	□□□□□ -0.19
ABCB8-222	ENST00000542328	C16orf86	Q6ZW13	317 aa		13.9	□□□□□ -0.19
ABCB8-222	ENST00000542328	TESPA1	A2RU30	521 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	GAS7	O60861	476 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	LUZP1	Q86V48	1076 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	ADARB2	Q9NS39	739 aa	Known RBP	13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	STOX1	Q6ZVD7	989 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	CCDC65	Q8IXS2	484 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	COA7	Q96BR5	231 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	HOXC10	Q9NYD6	342 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	FEM1B	Q9UK73	627 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	SPDYE2B	A6NHP3	402 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	GADD45B	O75293	160 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	PLEKHA8P1	O95397	391 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	SPDYE6	P0CI01	402 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	FKBP1A	P62942	108 aa	Known RBP	13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	PKP1	Q13835	747 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	FAM83B	Q5T0W9	1011 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	TMX1	Q9H3N1	280 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	AZI2	Q9H6S1	392 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	LMBRD1	Q9NUN5	540 aa		13.89	□□□□□ -0.19
ABCB8-222	ENST00000542328	SKIL	P12757	684 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	MKRN3	Q13064	507 aa	Known RBP	13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	GRM4	Q14833	912 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	PRR16	Q569H4	304 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	TAF4B	Q92750	862 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	ADD3	Q9UEY8	706 aa	Known RBP	13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	ARHGEF35	A5YM69	484 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	DDX39A	O00148	427 aa	Known RBP	13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	CCDC150	Q8NCX0	1101 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	USP28	Q96RU2	1077 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	SLF1	Q9BQI6	1058 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	RIOK1	Q9BRS2	568 aa	Known RBP	13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	RBSN	Q9H1K0	784 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	FDX1	P10109	184 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	PLA2G4D	Q86XP0	818 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	DNAI2	Q9GZS0	605 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	MTMR4	Q9NYA4	1195 aa		13.88	□□□□□ -0.19
ABCB8-222	ENST00000542328	OR52Z1	P0C646	297 aa		13.87	□□□□□ -0.19
ABCB8-222	ENST00000542328	STX17	P56962	302 aa		13.87	□□□□□ -0.19
ABCB8-222	ENST00000542328	PDE4D	Q08499	809 aa		13.87	□□□□□ -0.19
ABCB8-222	ENST00000542328	DACT2	Q5SW24	774 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms