RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 NEUROD6Q96NK8 337 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 NOC4LQ9BVI4 516 aaKnown RBP11.98□□□□□ -0.49
CHFR-220ENST00000541817 HOXC10Q9NYD6 342 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 LRP2BPQ9P2M1 347 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 CNPY2Q9Y2B0 182 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 MYH1P12882 1939 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 ZNF318Q5VUA4 2279 aa11.97□□□□□ -0.49
CHFR-220ENST00000541817 IL16Q14005 1332 aa11.97□□□□□ -0.49
CHFR-220ENST00000541817 GFRA3O60609 400 aa11.97□□□□□ -0.49
CHFR-220ENST00000541817 HLA-DOAP06340 250 aa11.97□□□□□ -0.49
CHFR-220ENST00000541817 PTGS1P23219 599 aa11.97□□□□□ -0.49
CHFR-220ENST00000541817 DSG3P32926 999 aa11.97□□□□□ -0.49
CHFR-220ENST00000541817 TMEM132BQ14DG7 1078 aa11.97□□□□□ -0.49
CHFR-220ENST00000541817 CERKLQ49MI3 558 aaPredicted RBP11.97□□□□□ -0.49
CHFR-220ENST00000541817 NAA16Q6N069 864 aaPredicted RBP11.97□□□□□ -0.49
CHFR-220ENST00000541817 TATDN1Q6P1N9 297 aa11.97□□□□□ -0.49
CHFR-220ENST00000541817 SNRKQ9NRH2 765 aa11.97□□□□□ -0.49
CHFR-220ENST00000541817 MYO5AQ9Y4I1 1855 aaKnown RBP11.97□□□□□ -0.49
CHFR-220ENST00000541817 BRWD1Q9NSI6 2320 aa11.96□□□□□ -0.49
CHFR-220ENST00000541817 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.96□□□□□ -0.49
CHFR-220ENST00000541817 LCHNA4D1U4 455 aa11.96□□□□□ -0.49
CHFR-220ENST00000541817 B4GALT4O60513 344 aa11.96□□□□□ -0.49
CHFR-220ENST00000541817 DUSP11O75319 330 aaKnown RBP11.96□□□□□ -0.49
CHFR-220ENST00000541817 BAG3O95817 575 aa11.96□□□□□ -0.49
CHFR-220ENST00000541817 IL15P40933 162 aaPredicted RBP11.96□□□□□ -0.49
CHFR-220ENST00000541817 FOXK2Q01167 660 aa11.96□□□□□ -0.49
CHFR-220ENST00000541817 TFCP2Q12800 502 aa11.96□□□□□ -0.49
CHFR-220ENST00000541817 LEXMQ3ZCV2 418 aa11.96□□□□□ -0.49
CHFR-220ENST00000541817 TMCO2Q7Z6W1 182 aaPredicted RBP11.96□□□□□ -0.49
CHFR-220ENST00000541817 RPUSD2Q8IZ73 545 aaKnown RBP11.96□□□□□ -0.49
CHFR-220ENST00000541817 FAM9BQ8IZU0 186 aa11.96□□□□□ -0.49
CHFR-220ENST00000541817 SPICE1Q8N0Z3 855 aa11.96□□□□□ -0.49
CHFR-220ENST00000541817 MTUS1Q9ULD2 1270 aa11.96□□□□□ -0.49
CHFR-220ENST00000541817 ROBO3Q96MS0 1386 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 GRIN2DO15399 1336 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 GRXCR2A6NFK2 248 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 H3BQ06 376 aaPredicted RBP11.95□□□□□ -0.5
CHFR-220ENST00000541817 FLOT1O75955 427 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 MCAMP43121 646 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 PSMC6P62333 389 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 EVX2Q03828 476 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 KCTD2Q14681 263 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 CXCL17Q6UXB2 119 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 CLEC10AQ8IUN9 316 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 PCSK9Q8NBP7 692 aaKnown RBP11.95□□□□□ -0.5
CHFR-220ENST00000541817 AGBL1Q96MI9 1066 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 CABP5Q9NP86 173 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 MCM3APO60318 1980 aa11.95□□□□□ -0.5
CHFR-220ENST00000541817 ZNF536O15090 1300 aa11.94□□□□□ -0.5
CHFR-220ENST00000541817 MPHOSPH10O00566 681 aaKnown RBP11.94□□□□□ -0.5
CHFR-220ENST00000541817 CTAGE5O15320 804 aa11.94□□□□□ -0.5
CHFR-220ENST00000541817 KRT37O76014 449 aa11.94□□□□□ -0.5
CHFR-220ENST00000541817 CYP2C9P11712 490 aa11.94□□□□□ -0.5
CHFR-220ENST00000541817 CST5P28325 142 aaPredicted RBP11.94□□□□□ -0.5
CHFR-220ENST00000541817 GJA9P57773 515 aa11.94□□□□□ -0.5
CHFR-220ENST00000541817 MVPQ14764 893 aaKnown RBP11.94□□□□□ -0.5
CHFR-220ENST00000541817 CCDC144BQ3MJ40 725 aa11.94□□□□□ -0.5
CHFR-220ENST00000541817 ATF7IPQ6VMQ6 1270 aa11.94□□□□□ -0.5
CHFR-220ENST00000541817 MFSD14AQ96MC6 490 aa11.94□□□□□ -0.5
CHFR-220ENST00000541817 TRIOO75962 3097 aa11.94□□□□□ -0.5
CHFR-220ENST00000541817 PTPRSQ13332 1948 aa11.94□□□□□ -0.5
CHFR-220ENST00000541817 PARP14Q460N5 1801 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 ZBTB22O15209 634 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 RGS20O76081 388 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 PLCG2P16885 1265 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 SHMT1P34896 483 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 PPP4CP60510 307 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 TCF15Q12870 199 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 ITGA7Q13683 1181 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 ACVR2BQ13705 512 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 GORABQ5T7V8 394 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 EP400NLQ6ZTU2 488 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 HERC6Q8IVU3 1022 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 MB21D1Q8N884 522 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 PPP1R13LQ8WUF5 828 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 UPF3AQ9H1J1 476 aaKnown RBP11.93□□□□□ -0.5
CHFR-220ENST00000541817 SPC25Q9HBM1 224 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 FBXO28Q9NVF7 368 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 SERPINB13Q9UIV8 391 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
CHFR-220ENST00000541817 DIS3Q9Y2L1 958 aaKnown RBP11.93□□□□□ -0.5
CHFR-220ENST00000541817 C5orf42Q9H799 3197 aa11.92□□□□□ -0.5
CHFR-220ENST00000541817 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.92□□□□□ -0.5
CHFR-220ENST00000541817 SLC25A27O95847 323 aa11.92□□□□□ -0.5
CHFR-220ENST00000541817 USP5P45974 858 aa11.92□□□□□ -0.5
CHFR-220ENST00000541817 PLCD1P51178 756 aa11.92□□□□□ -0.5
CHFR-220ENST00000541817 PTPN5P54829 565 aa11.92□□□□□ -0.5
CHFR-220ENST00000541817 CCDC184Q52MB2 194 aa11.92□□□□□ -0.5
CHFR-220ENST00000541817 RIOX2Q8IUF8 465 aa11.92□□□□□ -0.5
CHFR-220ENST00000541817 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
CHFR-220ENST00000541817 SUGCTQ9HAC7 445 aa11.92□□□□□ -0.5
CHFR-220ENST00000541817 MUTYHQ9UIF7 546 aa11.92□□□□□ -0.5
CHFR-220ENST00000541817 ASTN1O14525 1302 aa11.91□□□□□ -0.5
CHFR-220ENST00000541817 ZBED9Q6R2W3 1325 aa11.91□□□□□ -0.5
CHFR-220ENST00000541817 SOWAHBA6NEL2 793 aa11.91□□□□□ -0.5
CHFR-220ENST00000541817 KIF28PB7ZC32 967 aa11.91□□□□□ -0.5
CHFR-220ENST00000541817 ARID4AP29374 1257 aaPredicted RBP11.91□□□□□ -0.5
CHFR-220ENST00000541817 IRS1P35568 1242 aa11.91□□□□□ -0.5
CHFR-220ENST00000541817 ZP2Q05996 745 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms