RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 BTDP43251 543 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 TNNI2P48788 182 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 APBA1Q02410 837 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 PAK1Q13153 545 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 KRT26Q7Z3Y9 468 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 GLIS3Q8NEA6 775 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 TMEM47Q9BQJ4 181 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 TANGO6Q9C0B7 1094 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 AGPAT5Q9NUQ2 364 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 ERVK-24P63145 666 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 FAM207AQ9NSI2 230 aaPredicted RBP16.94■□□□□ 0.3
VARS2-211ENST00000541562 WDR19Q8NEZ3 1342 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 USP17L5A8MUK1 530 aa16.93■□□□□ 0.3
VARS2-211ENST00000541562 SARSP49591 514 aaKnown RBP16.93■□□□□ 0.3
VARS2-211ENST00000541562 POTEMA6NI47 508 aa16.93■□□□□ 0.3
VARS2-211ENST00000541562 KIF5CO60282 957 aa16.93■□□□□ 0.3
VARS2-211ENST00000541562 CXCR5P32302 372 aa16.93■□□□□ 0.3
VARS2-211ENST00000541562 NAP1L1P55209 391 aaKnown RBP16.93■□□□□ 0.3
VARS2-211ENST00000541562 MSL1Q68DK7 614 aa16.93■□□□□ 0.3
VARS2-211ENST00000541562 CRACR2AQ9BSW2 395 aa16.93■□□□□ 0.3
VARS2-211ENST00000541562 NUP188Q5SRE5 1749 aa16.93■□□□□ 0.3
VARS2-211ENST00000541562 SMCO2A6NFE2 343 aa16.93■□□□□ 0.3
VARS2-211ENST00000541562 N4BP1O75113 896 aaKnown RBP16.93■□□□□ 0.3
VARS2-211ENST00000541562 TPM1P09493 284 aa16.93■□□□□ 0.3
VARS2-211ENST00000541562 MTIF2P46199 727 aaKnown RBP16.93■□□□□ 0.3
VARS2-211ENST00000541562 RBM5P52756 815 aaKnown RBP eCLIP16.93■□□□□ 0.3
VARS2-211ENST00000541562 TXNRD1Q16881 649 aa16.93■□□□□ 0.3
VARS2-211ENST00000541562 MFSD14BQ5SR56 506 aa16.93■□□□□ 0.3
VARS2-211ENST00000541562 RPGRQ92834 1020 aaKnown RBP16.93■□□□□ 0.3
VARS2-211ENST00000541562 PLEKP08567 350 aaPredicted RBP16.92■□□□□ 0.3
VARS2-211ENST00000541562 TRIM21P19474 475 aaKnown RBP16.92■□□□□ 0.3
VARS2-211ENST00000541562 TXLNAP40222 546 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 COPB1P53618 953 aaKnown RBP16.92■□□□□ 0.3
VARS2-211ENST00000541562 PDE4DQ08499 809 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 EYA3Q99504 573 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 ADD3Q9UEY8 706 aaKnown RBP16.92■□□□□ 0.3
VARS2-211ENST00000541562 ADGRG1Q9Y653 693 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 MYH14Q7Z406 1995 aaKnown RBP16.92■□□□□ 0.3
VARS2-211ENST00000541562 STK36Q9NRP7 1315 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 ZNF142P52746 1687 aaPredicted RBP16.92■□□□□ 0.3
VARS2-211ENST00000541562 NUP98P52948 1817 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 G3V3G9 751 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 TTC26A0AVF1 554 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 ZNF185O15231 689 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 PLCG1P19174 1290 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 TTBK2Q6IQ55 1244 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 KCTD1Q719H9 257 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 FHOD1Q9Y613 1164 aa16.92■□□□□ 0.3
VARS2-211ENST00000541562 PKD1L3Q7Z443 1732 aa16.91■□□□□ 0.3
VARS2-211ENST00000541562 TADA3O75528 432 aa16.91■□□□□ 0.3
VARS2-211ENST00000541562 TNNT3P45378 269 aaPredicted RBP16.91■□□□□ 0.3
VARS2-211ENST00000541562 PLA2G4AP47712 749 aa16.91■□□□□ 0.3
VARS2-211ENST00000541562 PDE4CQ08493 712 aa16.91■□□□□ 0.3
VARS2-211ENST00000541562 FBXO33Q7Z6M2 555 aa16.91■□□□□ 0.3
VARS2-211ENST00000541562 CNBD1Q8NA66 436 aa16.91■□□□□ 0.3
VARS2-211ENST00000541562 AK7Q96M32 723 aa16.91■□□□□ 0.3
VARS2-211ENST00000541562 DCCP43146 1447 aa16.91■□□□□ 0.3
VARS2-211ENST00000541562 NELFCDQ8IXH7 590 aa16.91■□□□□ 0.3
VARS2-211ENST00000541562 CEP95Q96GE4 821 aa16.91■□□□□ 0.3
VARS2-211ENST00000541562 ABCC6O95255 1503 aa16.91■□□□□ 0.3
VARS2-211ENST00000541562 PARP1P09874 1014 aaKnown RBP16.9■□□□□ 0.3
VARS2-211ENST00000541562 GPSM2P81274 684 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 STK4Q13043 487 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 IKQ13123 557 aaPredicted RBP16.9■□□□□ 0.3
VARS2-211ENST00000541562 CCDC96Q2M329 555 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 KIAA1328Q86T90 577 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 ZSCAN29Q8IWY8 852 aaPredicted RBP16.9■□□□□ 0.3
VARS2-211ENST00000541562 CCDC102AQ96A19 550 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 FEZ1Q99689 392 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 KCNQ5Q9NR82 932 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 EHD2Q9NZN4 543 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 STX10O60499 249 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 OAS2P29728 719 aaKnown RBP16.9■□□□□ 0.3
VARS2-211ENST00000541562 PFKFB3Q16875 520 aaPredicted RBP16.9■□□□□ 0.3
VARS2-211ENST00000541562 CCDC93Q567U6 631 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 CSGALNACT2Q8N6G5 542 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 NOA1Q8NC60 698 aaKnown RBP16.9■□□□□ 0.3
VARS2-211ENST00000541562 PROCA1Q8NCQ7 364 aaPredicted RBP16.9■□□□□ 0.3
VARS2-211ENST00000541562 NOC3LQ8WTT2 800 aaKnown RBP16.9■□□□□ 0.3
VARS2-211ENST00000541562 MMRN2Q9H8L6 949 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.9■□□□□ 0.33e-6■■■■■ 42.5
VARS2-211ENST00000541562 ARGLU1Q9NWB6 273 aaPredicted RBP16.9■□□□□ 0.3
VARS2-211ENST00000541562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.9■□□□□ 0.3
VARS2-211ENST00000541562 A0A1B0GTH6 734 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 UBAP1LF5GYI3 381 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 MFAP3LO75121 409 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 CHMP4BP1P59074 171 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 ATP2C1P98194 919 aaPredicted RBP16.9■□□□□ 0.3
VARS2-211ENST00000541562 KANK3Q6NY19 840 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 AMOTL1Q8IY63 956 aa16.9■□□□□ 0.3
VARS2-211ENST00000541562 TDP2O95551 362 aa16.89■□□□□ 0.3
VARS2-211ENST00000541562 KIF5BP33176 963 aa16.89■□□□□ 0.3
VARS2-211ENST00000541562 BMS1Q14692 1282 aaKnown RBP16.89■□□□□ 0.3
VARS2-211ENST00000541562 MEX3CQ5U5Q3 659 aaKnown RBP16.89■□□□□ 0.3
VARS2-211ENST00000541562 TBCKQ8TEA7 893 aa16.89■□□□□ 0.3
VARS2-211ENST00000541562 PNKPQ96T60 521 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms