RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ASB11Q8WXH4 323 aa8.07□□□□□ -1.12
SUDS3-202ENST00000541280 SIN3AQ96ST3 1273 aa8.07□□□□□ -1.12
SUDS3-202ENST00000541280 PRDM5Q9NQX1 630 aaPredicted RBP8.07□□□□□ -1.12
SUDS3-202ENST00000541280 ADAMTS6Q9UKP5 1117 aa8.07□□□□□ -1.12
SUDS3-202ENST00000541280 PCDHB5Q9Y5E4 795 aa8.07□□□□□ -1.12
SUDS3-202ENST00000541280 GPRASP1Q5JY77 1395 aa8.07□□□□□ -1.12
SUDS3-202ENST00000541280 PNPLA6Q8IY17 1366 aa8.07□□□□□ -1.12
SUDS3-202ENST00000541280 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.06□□□□□ -1.12
SUDS3-202ENST00000541280 SPATA31A3Q5VYP0 1347 aa8.06□□□□□ -1.12
SUDS3-202ENST00000541280 MYO5BQ9ULV0 1848 aa8.06□□□□□ -1.12
SUDS3-202ENST00000541280 BIN1O00499 593 aa8.06□□□□□ -1.12
SUDS3-202ENST00000541280 RNASE1P07998 156 aaKnown RBP8.06□□□□□ -1.12
SUDS3-202ENST00000541280 ZNF865P0CJ78 1059 aaPredicted RBP8.06□□□□□ -1.12
SUDS3-202ENST00000541280 CD96P40200 585 aa8.06□□□□□ -1.12
SUDS3-202ENST00000541280 CDK8P49336 464 aa8.06□□□□□ -1.12
SUDS3-202ENST00000541280 SEPT6Q14141 434 aa8.06□□□□□ -1.12
SUDS3-202ENST00000541280 NKG7Q16617 165 aa8.06□□□□□ -1.12
SUDS3-202ENST00000541280 MEI1Q5TIA1 1274 aa8.06□□□□□ -1.12
SUDS3-202ENST00000541280 NGDNQ8NEJ9 315 aaKnown RBP8.06□□□□□ -1.12
SUDS3-202ENST00000541280 C8orf37Q96NL8 207 aa8.06□□□□□ -1.12
SUDS3-202ENST00000541280 CDK19Q9BWU1 502 aa8.06□□□□□ -1.12
SUDS3-202ENST00000541280 SBNO1A3KN83 1393 aa8.06□□□□□ -1.12
SUDS3-202ENST00000541280 PITPNM2Q9BZ72 1349 aa8.05□□□□□ -1.12
SUDS3-202ENST00000541280 PPLO60437 1756 aa8.05□□□□□ -1.12
SUDS3-202ENST00000541280 GNAT3A8MTJ3 354 aa8.05□□□□□ -1.12
SUDS3-202ENST00000541280 CST3P01034 146 aaPredicted RBP8.05□□□□□ -1.12
SUDS3-202ENST00000541280 SLC23A3Q6PIS1 610 aa8.05□□□□□ -1.12
SUDS3-202ENST00000541280 HIRIP3Q9BW71 556 aaPredicted RBP8.05□□□□□ -1.12
SUDS3-202ENST00000541280 ARHGEF10O15013 1369 aa8.05□□□□□ -1.12
SUDS3-202ENST00000541280 USP31Q70CQ4 1352 aa8.05□□□□□ -1.12
SUDS3-202ENST00000541280 CDC42BPGQ6DT37 1551 aa8.05□□□□□ -1.12
SUDS3-202ENST00000541280 CLSPNQ9HAW4 1339 aa8.04□□□□□ -1.12
SUDS3-202ENST00000541280 CENPJQ9HC77 1338 aaPredicted RBP8.04□□□□□ -1.12
SUDS3-202ENST00000541280 XIRP1Q702N8 1843 aaKnown RBP8.04□□□□□ -1.12
SUDS3-202ENST00000541280 CTSHP09668 335 aa8.04□□□□□ -1.12
SUDS3-202ENST00000541280 TFE3P19532 575 aaPredicted RBP8.04□□□□□ -1.12
SUDS3-202ENST00000541280 ETF1P62495 437 aaKnown RBP8.04□□□□□ -1.12
SUDS3-202ENST00000541280 RBM6P78332 1123 aaKnown RBP8.04□□□□□ -1.12
SUDS3-202ENST00000541280 PSMD2Q13200 908 aa8.04□□□□□ -1.12
SUDS3-202ENST00000541280 TAF1CQ15572 869 aaPredicted RBP8.04□□□□□ -1.12
SUDS3-202ENST00000541280 POU5F2Q8N7G0 328 aa8.04□□□□□ -1.12
SUDS3-202ENST00000541280 PMFBP1Q8TBY8 1022 aa8.04□□□□□ -1.12
SUDS3-202ENST00000541280 PI4K2BQ8TCG2 481 aa8.04□□□□□ -1.12
SUDS3-202ENST00000541280 MIR1-1HGQ9H1L0 117 aa8.04□□□□□ -1.12
SUDS3-202ENST00000541280 RC3H2Q9HBD1 1191 aaKnown RBP8.04□□□□□ -1.12
SUDS3-202ENST00000541280 TRPC5Q9UL62 973 aaPredicted RBP8.04□□□□□ -1.12
SUDS3-202ENST00000541280 TONSLQ96HA7 1378 aa8.04□□□□□ -1.12
SUDS3-202ENST00000541280 ADGRB1O14514 1584 aa8.04□□□□□ -1.12
SUDS3-202ENST00000541280 AFF2P51816 1311 aa8.03□□□□□ -1.12
SUDS3-202ENST00000541280 YBX3P16989 372 aaKnown RBP eCLIP8.03□□□□□ -1.12
SUDS3-202ENST00000541280 ERCC3P19447 782 aa8.03□□□□□ -1.12
SUDS3-202ENST00000541280 LMNB1P20700 586 aa8.03□□□□□ -1.12
SUDS3-202ENST00000541280 GRK4P32298 578 aa8.03□□□□□ -1.12
SUDS3-202ENST00000541280 XPCQ01831 940 aaPredicted RBP8.03□□□□□ -1.12
SUDS3-202ENST00000541280 OGFOD2Q6N063 350 aa8.03□□□□□ -1.12
SUDS3-202ENST00000541280 ZNF746Q6NUN9 644 aaPredicted RBP8.03□□□□□ -1.12
SUDS3-202ENST00000541280 CCDC84Q86UT8 332 aaPredicted RBP8.03□□□□□ -1.12
SUDS3-202ENST00000541280 MRPL41Q8IXM3 137 aaKnown RBP8.03□□□□□ -1.12
SUDS3-202ENST00000541280 LRRN4CLQ8ND94 238 aa8.03□□□□□ -1.12
SUDS3-202ENST00000541280 COX4I2Q96KJ9 171 aa8.03□□□□□ -1.12
SUDS3-202ENST00000541280 MIPEPQ99797 713 aa8.03□□□□□ -1.12
SUDS3-202ENST00000541280 LAMC1P11047 1609 aa8.03□□□□□ -1.12
SUDS3-202ENST00000541280 COL16A1Q07092 1604 aaPredicted RBP8.03□□□□□ -1.12
SUDS3-202ENST00000541280 EVC2Q86UK5 1308 aa8.03□□□□□ -1.12
SUDS3-202ENST00000541280 BRD4O60885 1362 aaPredicted RBP8.02□□□□□ -1.13
SUDS3-202ENST00000541280 ROCK2O75116 1388 aaKnown RBP8.02□□□□□ -1.13
SUDS3-202ENST00000541280 RPL6Q02878 288 aaKnown RBP8.02□□□□□ -1.13
SUDS3-202ENST00000541280 TSNAXIP1Q2TAA8 658 aa8.02□□□□□ -1.13
SUDS3-202ENST00000541280 NBPF8Q3BBV2 869 aa8.02□□□□□ -1.13
SUDS3-202ENST00000541280 SFRP5Q5T4F7 317 aa8.02□□□□□ -1.13
SUDS3-202ENST00000541280 PRAMEF13Q5VWM6 474 aa8.02□□□□□ -1.13
SUDS3-202ENST00000541280 FLAD1Q8NFF5 587 aa8.02□□□□□ -1.13
SUDS3-202ENST00000541280 CRELD1Q96HD1 420 aa8.02□□□□□ -1.13
SUDS3-202ENST00000541280 PUS7Q96PZ0 661 aaKnown RBP8.02□□□□□ -1.13
SUDS3-202ENST00000541280 SEMA3GQ9NS98 782 aa8.02□□□□□ -1.13
SUDS3-202ENST00000541280 LMCD1Q9NZU5 365 aa8.02□□□□□ -1.13
SUDS3-202ENST00000541280 CNTNAP4Q9C0A0 1308 aa8.02□□□□□ -1.13
SUDS3-202ENST00000541280 PHLPP1O60346 1717 aa8.01□□□□□ -1.13
SUDS3-202ENST00000541280 MAP3K11Q16584 847 aa8.01□□□□□ -1.13
SUDS3-202ENST00000541280 LETMD1Q6P1Q0 360 aa8.01□□□□□ -1.13
SUDS3-202ENST00000541280 UNC5CLQ8IV45 518 aa8.01□□□□□ -1.13
SUDS3-202ENST00000541280 PHC3Q8NDX5 983 aa8.01□□□□□ -1.13
SUDS3-202ENST00000541280 CARD11Q9BXL7 1154 aa8.01□□□□□ -1.13
SUDS3-202ENST00000541280 TJP2Q9UDY2 1190 aa8.01□□□□□ -1.13
SUDS3-202ENST00000541280 ADAM30Q9UKF2 790 aa8.01□□□□□ -1.13
SUDS3-202ENST00000541280 CAPN6Q9Y6Q1 641 aa8.01□□□□□ -1.13
SUDS3-202ENST00000541280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.01□□□□□ -1.13
SUDS3-202ENST00000541280 PRR36Q9H6K5 1346 aa8.01□□□□□ -1.13
SUDS3-202ENST00000541280 SETD1AO15047 1707 aaKnown RBP8□□□□□ -1.13
SUDS3-202ENST00000541280 PRR33A8MZF0 331 aa8□□□□□ -1.13
SUDS3-202ENST00000541280 IKZF1Q13422 519 aa8□□□□□ -1.13
SUDS3-202ENST00000541280 SLC6A19Q695T7 634 aa8□□□□□ -1.13
SUDS3-202ENST00000541280 THAP5Q7Z6K1 395 aa8□□□□□ -1.13
SUDS3-202ENST00000541280 MFSD4AQ8N468 514 aa8□□□□□ -1.13
SUDS3-202ENST00000541280 RIN3Q8TB24 985 aa8□□□□□ -1.13
SUDS3-202ENST00000541280 TPX2Q9ULW0 747 aaKnown RBP8□□□□□ -1.13
SUDS3-202ENST00000541280 PXDNQ92626 1479 aa8□□□□□ -1.13
SUDS3-202ENST00000541280 LRP6O75581 1613 aa8□□□□□ -1.13
SUDS3-202ENST00000541280 KIR3DL1P43629 444 aa7.99□□□□□ -1.13
SUDS3-202ENST00000541280 ZP2Q05996 745 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms