RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ERO1AQ96HE7 468 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 UPF3BQ9BZI7 483 aaKnown RBP18.1■□□□□ 0.49
DDB1-218ENST00000540784 TXNRD2Q9NNW7 524 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 PEX10O60683 326 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 CALM1P0DP23 149 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 CALM2P0DP24 149 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 CALM3P0DP25 149 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 ERVK-9P63128 1117 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 ERVK-24P63145 666 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 CCAR1Q8IX12 1150 aaKnown RBP18.09■□□□□ 0.49
DDB1-218ENST00000540784 FBXL16Q8N461 479 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 IL17RAQ96F46 866 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 MAP3K14Q99558 947 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 PRDM10Q9NQV6 1147 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 PDRG1Q9NUG6 133 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 BTBD7Q9P203 1132 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 PRR12Q9ULL5 1215 aa18.09■□□□□ 0.49
DDB1-218ENST00000540784 PALM3A6NDB9 673 aaPredicted RBP18.08■□□□□ 0.48
DDB1-218ENST00000540784 CNMDO75829 334 aa18.08■□□□□ 0.48
DDB1-218ENST00000540784 DDAH1O94760 285 aa18.08■□□□□ 0.48
DDB1-218ENST00000540784 CCNA1P78396 465 aa18.08■□□□□ 0.48
DDB1-218ENST00000540784 LACTBP83111 547 aaPredicted RBP18.08■□□□□ 0.48
DDB1-218ENST00000540784 PLS1Q14651 629 aa18.08■□□□□ 0.48
DDB1-218ENST00000540784 GRM4Q14833 912 aa18.08■□□□□ 0.48
DDB1-218ENST00000540784 SYDE2Q5VT97 1194 aa18.08■□□□□ 0.48
DDB1-218ENST00000540784 CD99L2Q8TCZ2 262 aa18.08■□□□□ 0.48
DDB1-218ENST00000540784 UBA5Q9GZZ9 404 aa18.08■□□□□ 0.48
DDB1-218ENST00000540784 KLRF2D3W0D1 207 aa18.07■□□□□ 0.48
DDB1-218ENST00000540784 ECM2O94769 699 aaPredicted RBP18.07■□□□□ 0.48
DDB1-218ENST00000540784 FMNL1O95466 1100 aaPredicted RBP18.07■□□□□ 0.48
DDB1-218ENST00000540784 KIF5BP33176 963 aa18.07■□□□□ 0.48
DDB1-218ENST00000540784 PSMC4P43686 418 aa18.07■□□□□ 0.48
DDB1-218ENST00000540784 RBM25P49756 843 aaKnown RBP18.07■□□□□ 0.48
DDB1-218ENST00000540784 TMEM132BQ14DG7 1078 aa18.07■□□□□ 0.48
DDB1-218ENST00000540784 STAG2Q8N3U4 1231 aa18.07■□□□□ 0.48
DDB1-218ENST00000540784 CTCFLQ8NI51 663 aaPredicted RBP18.07■□□□□ 0.48
DDB1-218ENST00000540784 BRF1Q92994 677 aa18.07■□□□□ 0.48
DDB1-218ENST00000540784 MYL10Q9BUA6 226 aa18.07■□□□□ 0.48
DDB1-218ENST00000540784 SLC38A10Q9HBR0 1119 aa18.07■□□□□ 0.48
DDB1-218ENST00000540784 MAD2L2Q9UI95 211 aa18.07■□□□□ 0.48
DDB1-218ENST00000540784 BRPF3Q9ULD4 1205 aa18.07■□□□□ 0.48
DDB1-218ENST00000540784 NAP1L2Q9ULW6 460 aaPredicted RBP18.07■□□□□ 0.48
DDB1-218ENST00000540784 KLF18A0A0U1RQI7 1052 aa18.06■□□□□ 0.48
DDB1-218ENST00000540784 ZBTB43O43298 467 aa18.06■□□□□ 0.48
DDB1-218ENST00000540784 STAT3P40763 770 aa18.06■□□□□ 0.48
DDB1-218ENST00000540784 FCGRTP55899 365 aa18.06■□□□□ 0.48
DDB1-218ENST00000540784 APOBRQ0VD83 1088 aa18.06■□□□□ 0.48
DDB1-218ENST00000540784 CPXCR1Q8N123 301 aa18.06■□□□□ 0.48
DDB1-218ENST00000540784 FANCBQ8NB91 859 aa18.06■□□□□ 0.48
DDB1-218ENST00000540784 AGXT2Q9BYV1 514 aa18.06■□□□□ 0.48
DDB1-218ENST00000540784 SPATC1LQ9H0A9 340 aa18.06■□□□□ 0.48
DDB1-218ENST00000540784 VAT1LQ9HCJ6 419 aa18.06■□□□□ 0.48
DDB1-218ENST00000540784 DHX16O60231 1041 aaKnown RBP18.05■□□□□ 0.48
DDB1-218ENST00000540784 SLC4A3P48751 1232 aa18.05■□□□□ 0.48
DDB1-218ENST00000540784 GNAQP50148 359 aa18.05■□□□□ 0.48
DDB1-218ENST00000540784 NEK4P51957 841 aa18.05■□□□□ 0.48
DDB1-218ENST00000540784 OAZ1P54368 228 aa18.05■□□□□ 0.48
DDB1-218ENST00000540784 SNAP25P60880 206 aa18.05■□□□□ 0.48
DDB1-218ENST00000540784 APOA5Q6Q788 366 aa18.05■□□□□ 0.48
DDB1-218ENST00000540784 REPS2Q8NFH8 660 aa18.05■□□□□ 0.48
DDB1-218ENST00000540784 MOV10L1Q9BXT6 1211 aaKnown RBP18.05■□□□□ 0.48
DDB1-218ENST00000540784 ALDH8A1Q9H2A2 487 aaPredicted RBP18.05■□□□□ 0.48
DDB1-218ENST00000540784 CPVLQ9H3G5 476 aa18.05■□□□□ 0.48
DDB1-218ENST00000540784 EFCC1Q9HA90 598 aa18.05■□□□□ 0.48
DDB1-218ENST00000540784 CWC22Q9HCG8 908 aaKnown RBP18.05■□□□□ 0.48
DDB1-218ENST00000540784 RAVER2Q9HCJ3 691 aaKnown RBP18.05■□□□□ 0.48
DDB1-218ENST00000540784 ATP2A1O14983 1001 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 SLC25A27O95847 323 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 GNRH1P01148 92 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 RXRAP19793 462 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 HOXD10P28358 340 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 MAPK4P31152 587 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 CCDC174Q6PII3 467 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 MICU3Q86XE3 530 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 RAB11FIP4Q86YS3 637 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 CCDC144CPQ8IYA2 1237 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 ADGRF4Q8IZF3 695 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 TRIM47Q96LD4 638 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 LZTS2Q9BRK4 669 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 ARHGAP39Q9C0H5 1083 aa18.04■□□□□ 0.48
DDB1-218ENST00000540784 ZNF214Q9UL59 606 aaPredicted RBP18.04■□□□□ 0.48
DDB1-218ENST00000540784 TNPO2O14787 897 aaKnown RBP18.03■□□□□ 0.48
DDB1-218ENST00000540784 CTGFP29279 349 aa18.03■□□□□ 0.48
DDB1-218ENST00000540784 TOB2Q14106 344 aaPredicted RBP18.03■□□□□ 0.48
DDB1-218ENST00000540784 ANKRD1Q15327 319 aa18.03■□□□□ 0.48
DDB1-218ENST00000540784 WDR78Q5VTH9 848 aa18.03■□□□□ 0.48
DDB1-218ENST00000540784 NCAPG2Q86XI2 1143 aa18.03■□□□□ 0.48
DDB1-218ENST00000540784 RIOX2Q8IUF8 465 aa18.03■□□□□ 0.48
DDB1-218ENST00000540784 SHCBP1Q8NEM2 672 aa18.03■□□□□ 0.48
DDB1-218ENST00000540784 COA7Q96BR5 231 aa18.03■□□□□ 0.48
DDB1-218ENST00000540784 TEX13BQ9BXU2 312 aa18.03■□□□□ 0.48
DDB1-218ENST00000540784 PORCNQ9H237 461 aa18.03■□□□□ 0.48
DDB1-218ENST00000540784 RANBP17Q9H2T7 1088 aaKnown RBP18.03■□□□□ 0.48
DDB1-218ENST00000540784 MROH8Q9H579 483 aa18.03■□□□□ 0.48
DDB1-218ENST00000540784 ERCC3P19447 782 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 SMARCA1P28370 1054 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 COPB2P35606 906 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 RCAN1P53805 252 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 EVCP57679 992 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 PPP2R5BQ15173 497 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms