RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	KAT14	Q9H8E8	782 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	BRMS1	Q9HCU9	246 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	RRP15	Q9Y3B9	282 aa	Known RBP	6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	PCDHA5	Q9Y5H7	936 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	MRFAP1	Q9Y605	127 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	RGPD3	A6NKT7	1758 aa	Predicted RBP	6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	RGPD4	Q7Z3J3	1758 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	PATL2	C9JE40	543 aa	Known RBP	6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	NFKBIE	O00221	500 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	ARHGAP6	O43182	974 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	TPM1	P09493	284 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	ATP2B1	P20020	1258 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	ATL3	Q6DD88	541 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	SHC4	Q6S5L8	630 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	CATIP	Q7Z7H3	387 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	MAPKAPK5	Q8IW41	473 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	TRIM22	Q8IYM9	498 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	GRAMD1C	Q8IYS0	662 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	FAM151A	Q8WW52	585 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	RNF216	Q9NWF9	866 aa	Predicted RBP	6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	PNMA3	Q9UL41	463 aa		6.41	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	ADAMTS7	Q9UKP4	1686 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	SOWAHD	A6NJG2	315 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783		M0R2C6	588 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	CBFA2T2	O43439	604 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	PRC1	O43663	620 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	BMP6	P22004	513 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	CMA1	P23946	247 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	IRX3	P78415	501 aa	Predicted RBP	6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	MUM1L1	Q5H9M0	696 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	ANGEL2	Q5VTE6	544 aa	Known RBP	6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	RSRC2	Q7L4I2	434 aa	Known RBP	6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	GOLGA1	Q92805	767 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	PHKB	Q93100	1093 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	CCDC102A	Q96A19	550 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	ZNF274	Q96GC6	653 aa	Predicted RBP	6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	TSPYL1	Q9H0U9	437 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	TDRD3	Q9H7E2	651 aa	Known RBP	6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	EHMT1	Q9H9B1	1298 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	POLR3E	Q9NVU0	708 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	ANGEL1	Q9UNK9	670 aa	Known RBP	6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	FAN1	Q9Y2M0	1017 aa		6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	ZBTB12	Q9Y330	459 aa	Predicted RBP	6.4	□□□□□ -1.38
RAPGEF4-215	ENST00000540783	COBL	O75128	1261 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TOMM70	O94826	608 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	YEATS4	O95619	227 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ASNS	P08243	561 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ADD2	P35612	726 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	KCNJ6	P48051	423 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	KIF23	Q02241	960 aa	Predicted RBP	6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	FSTL1	Q12841	308 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SAFB	Q15424	915 aa	Known RBP eCLIP	6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	DACT2	Q5SW24	774 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	REM2	Q8IYK8	340 aa	Predicted RBP	6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CNNM3	Q8NE01	707 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	KIFC2	Q96AC6	838 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ZDHHC15	Q96MV8	337 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PNKP	Q96T60	521 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ARMT1	Q9H993	441 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GOPC	Q9HD26	462 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ZNF70	Q9UC06	446 aa	Predicted RBP	6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SERPINB13	Q9UIV8	391 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CACNA1F	O60840	1977 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	C4A	P0C0L4	1744 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	FZD9	O00144	591 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	IKBKB	O14920	756 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	MARCH6	O60337	910 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TUBB4A	P04350	444 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CALM1	P0DP23	149 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CALM2	P0DP24	149 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CALM3	P0DP25	149 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	OSBP	P22059	807 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TXLNA	P40222	546 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CHMP4BP1	P59074	171 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	FMR1	Q06787	632 aa	Known RBP eCLIP	6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SREBF2	Q12772	1141 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SRL	Q86TD4	932 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	FAM83A	Q86UY5	434 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	METTL16	Q86W50	562 aa	Known RBP	6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TC2N	Q8N9U0	490 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	RABGGTA	Q92696	567 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	OSBP2	Q969R2	916 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ABCB6	Q9NP58	842 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SAMSN1	Q9NSI8	373 aa	Known RBP	6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SLC5A4	Q9NY91	659 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CWC15	Q9P013	229 aa	Known RBP	6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	NFE2L3	Q9Y4A8	694 aa		6.4	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	IFIT3	O14879	490 aa	Known RBP	6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ACTN2	P35609	894 aa		6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	MCAM	P43121	646 aa		6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PRKG1	Q13976	671 aa		6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CERKL	Q49MI3	558 aa	Predicted RBP	6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	LEKR1	Q6ZMV7	388 aa		6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	NKX2-3	Q8TAU0	364 aa		6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GOLGA5	Q8TBA6	731 aa		6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TAF1D	Q9H5J8	278 aa	Predicted RBP	6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GBA2	Q9HCG7	927 aa	Predicted RBP	6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SEC63	Q9UGP8	760 aa	Known RBP	6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SAP30BP	Q9UHR5	308 aa	Known RBP	6.39	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	HPS5	Q9UPZ3	1129 aa		6.39	□□□□□ -1.39

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms