RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SNRNP48Q6IEG0 339 aaKnown RBP12.28□□□□□ -0.44
CDCA3-208ENST00000540683 CHST13Q8NET6 341 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 OTUD7AQ8TE49 926 aaPredicted RBP12.28□□□□□ -0.44
CDCA3-208ENST00000540683 DDX11Q96FC9 970 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 TOMM22Q9NS69 142 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 CTNNA3Q9UI47 895 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 ISY1Q9ULR0 285 aaKnown RBP12.28□□□□□ -0.44
CDCA3-208ENST00000540683 STX8Q9UNK0 236 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 CCDC171Q6TFL3 1326 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 RLFQ13129 1914 aa12.27□□□□□ -0.44
CDCA3-208ENST00000540683 DNM1LO00429 736 aa12.27□□□□□ -0.45
CDCA3-208ENST00000540683 PRDM1O75626 825 aa12.27□□□□□ -0.45
CDCA3-208ENST00000540683 CCL14Q16627 93 aa12.27□□□□□ -0.45
CDCA3-208ENST00000540683 B4GALNT3Q6L9W6 998 aa12.27□□□□□ -0.45
CDCA3-208ENST00000540683 MFSD6Q6ZSS7 791 aa12.27□□□□□ -0.45
CDCA3-208ENST00000540683 ZNF467Q7Z7K2 595 aaPredicted RBP12.27□□□□□ -0.45
CDCA3-208ENST00000540683 CLEC10AQ8IUN9 316 aa12.27□□□□□ -0.45
CDCA3-208ENST00000540683 STK11IPQ8N1F8 1099 aa12.27□□□□□ -0.45
CDCA3-208ENST00000540683 RUFY2Q8WXA3 655 aa12.27□□□□□ -0.45
CDCA3-208ENST00000540683 TTC14Q96N46 770 aa12.27□□□□□ -0.45
CDCA3-208ENST00000540683 SEC62Q99442 399 aaKnown RBP12.27□□□□□ -0.45
CDCA3-208ENST00000540683 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDCA3-208ENST00000540683 PRKAG2Q9UGJ0 569 aa12.27□□□□□ -0.45
CDCA3-208ENST00000540683 PARP14Q460N5 1801 aa12.27□□□□□ -0.45
CDCA3-208ENST00000540683 RARBP10826 455 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 CYBAP13498 195 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 KIAA1755Q5JYT7 1200 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 POTEEQ6S8J3 1075 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDCA3-208ENST00000540683 IQCA1Q86XH1 822 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 DCAF4Q8WV16 495 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 STAG1Q8WVM7 1258 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 ESR2Q92731 530 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 KIFC2Q96AC6 838 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 MAML3Q96JK9 1138 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 MPHOSPH6Q99547 160 aaKnown RBP12.26□□□□□ -0.45
CDCA3-208ENST00000540683 TINF2Q9BSI4 451 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 SLC38A10Q9HBR0 1119 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 TCP11L1Q9NUJ3 509 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 ZNF214Q9UL59 606 aaPredicted RBP12.26□□□□□ -0.45
CDCA3-208ENST00000540683 PFASO15067 1338 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 SYNGAP1Q96PV0 1343 aa12.26□□□□□ -0.45
CDCA3-208ENST00000540683 ZNF213O14771 459 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 PEX10O60683 326 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 FGAP02671 866 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 FGRP09769 529 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 HSPD1P10809 573 aaKnown RBP12.25□□□□□ -0.45
CDCA3-208ENST00000540683 TOP1P11387 765 aaKnown RBP12.25□□□□□ -0.45
CDCA3-208ENST00000540683 SDSP20132 328 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 CCND3P30281 292 aaPredicted RBP12.25□□□□□ -0.45
CDCA3-208ENST00000540683 CYP2C19P33261 490 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 TRIM32Q13049 653 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 FAM47AQ5JRC9 791 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 LHX8Q68G74 356 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 RNF180Q86T96 592 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 ANKRD35Q8N283 1001 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 EXOC6Q8TAG9 804 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 NPLOC4Q8TAT6 608 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 CNNM2Q9H8M5 875 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 SPC25Q9HBM1 224 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 FBXO28Q9NVF7 368 aa12.25□□□□□ -0.45
CDCA3-208ENST00000540683 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDCA3-208ENST00000540683 COL11A1P12107 1806 aaPredicted RBP12.25□□□□□ -0.45
CDCA3-208ENST00000540683 TMEM232C9JQI7 657 aa12.24□□□□□ -0.45
CDCA3-208ENST00000540683 COBLO75128 1261 aa12.24□□□□□ -0.45
CDCA3-208ENST00000540683 AKR1A1P14550 325 aa12.24□□□□□ -0.45
CDCA3-208ENST00000540683 IMMTQ16891 758 aaKnown RBP12.24□□□□□ -0.45
CDCA3-208ENST00000540683 AKNAD1Q5T1N1 836 aa12.24□□□□□ -0.45
CDCA3-208ENST00000540683 PLEKHM2Q8IWE5 1019 aa12.24□□□□□ -0.45
CDCA3-208ENST00000540683 CPXCR1Q8N123 301 aa12.24□□□□□ -0.45
CDCA3-208ENST00000540683 LRRC47Q8N1G4 583 aaKnown RBP12.24□□□□□ -0.45
CDCA3-208ENST00000540683 MAF1Q9H063 256 aa12.24□□□□□ -0.45
CDCA3-208ENST00000540683 ACAD9Q9H845 621 aa12.24□□□□□ -0.45
CDCA3-208ENST00000540683 FLRT1Q9NZU1 646 aa12.24□□□□□ -0.45
CDCA3-208ENST00000540683 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
CDCA3-208ENST00000540683 ZNFX1Q9P2E3 1918 aaKnown RBP12.23□□□□□ -0.45
CDCA3-208ENST00000540683 RAD50Q92878 1312 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 LOC102724159A0A0B4J2E5 919 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 B4DLN1 442 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 IGHA2P01877 340 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 COL6A1P12109 1028 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 BMP8BP34820 402 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 MRPL12P52815 198 aaKnown RBP12.23□□□□□ -0.45
CDCA3-208ENST00000540683 CTDSPL2Q05D32 466 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 NMIQ13287 307 aaPredicted RBP12.23□□□□□ -0.45
CDCA3-208ENST00000540683 PWP2Q15269 919 aaKnown RBP12.23□□□□□ -0.45
CDCA3-208ENST00000540683 ZNF792Q3KQV3 632 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 RRP12Q5JTH9 1297 aaKnown RBP12.23□□□□□ -0.45
CDCA3-208ENST00000540683 MAMDC4Q6UXC1 1216 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 CCDC129Q6ZRS4 1044 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 REPS2Q8NFH8 660 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 FAM227BQ96M60 508 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 NUP88Q99567 741 aaPredicted RBP12.23□□□□□ -0.45
CDCA3-208ENST00000540683 LBHD1Q9BQE6 289 aaPredicted RBP12.23□□□□□ -0.45
CDCA3-208ENST00000540683 DSCC1Q9BVC3 393 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 KRT23Q9C075 422 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 FAM184BQ9ULE4 1060 aa12.23□□□□□ -0.45
CDCA3-208ENST00000540683 SUPT16HQ9Y5B9 1047 aaKnown RBP12.23□□□□□ -0.45
CDCA3-208ENST00000540683 A0A0D9SFI3 127 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms